RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 NBEAQ8NFP9 2946 aa7.03□□□□□ -1.28
PSEN1-216ENST00000556066 A0A0A0MRY4 1105 aa7.03□□□□□ -1.28
PSEN1-216ENST00000556066 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.03□□□□□ -1.28
PSEN1-216ENST00000556066 PATE3B3GLJ2 98 aa7.03□□□□□ -1.28
PSEN1-216ENST00000556066 H3BM21 787 aa7.03□□□□□ -1.28
PSEN1-216ENST00000556066 KHNYNO15037 678 aaKnown RBP7.03□□□□□ -1.28
PSEN1-216ENST00000556066 ATP9BO43861 1147 aa7.03□□□□□ -1.28
PSEN1-216ENST00000556066 ADAM23O75077 832 aa7.03□□□□□ -1.28
PSEN1-216ENST00000556066 SMC2O95347 1197 aa7.03□□□□□ -1.28
PSEN1-216ENST00000556066 HMBSP08397 361 aa7.03□□□□□ -1.28
PSEN1-216ENST00000556066 RALAP11233 206 aa7.03□□□□□ -1.28
PSEN1-216ENST00000556066 HOXB2P14652 356 aa7.03□□□□□ -1.28
PSEN1-216ENST00000556066 TYRP14679 529 aa7.03□□□□□ -1.28
PSEN1-216ENST00000556066 PLA2G4AP47712 749 aa7.03□□□□□ -1.28
PSEN1-216ENST00000556066 KIF11P52732 1056 aa7.03□□□□□ -1.28
PSEN1-216ENST00000556066 LIMK1P53667 647 aa7.03□□□□□ -1.28
PSEN1-216ENST00000556066 RAD23BP54727 409 aa7.03□□□□□ -1.28
PSEN1-216ENST00000556066 SLC8A3P57103 927 aa7.03□□□□□ -1.28
PSEN1-216ENST00000556066 ENPEPQ07075 957 aa7.03□□□□□ -1.28
PSEN1-216ENST00000556066 EFEMP1Q12805 493 aa7.03□□□□□ -1.28
PSEN1-216ENST00000556066 LRMPQ12912 555 aa7.03□□□□□ -1.28
PSEN1-216ENST00000556066 HSF5Q4G112 596 aaPredicted RBP7.03□□□□□ -1.28
PSEN1-216ENST00000556066 EGFLAMQ63HQ2 1017 aa7.03□□□□□ -1.28
PSEN1-216ENST00000556066 PMS2CLQ68D20 193 aa7.03□□□□□ -1.28
PSEN1-216ENST00000556066 ISM2Q6H9L7 571 aa7.03□□□□□ -1.28
PSEN1-216ENST00000556066 SDE2Q6IQ49 451 aa7.03□□□□□ -1.28
PSEN1-216ENST00000556066 RSRC2Q7L4I2 434 aaKnown RBP7.03□□□□□ -1.28
PSEN1-216ENST00000556066 LPCAT2Q7L5N7 544 aa7.03□□□□□ -1.28
PSEN1-216ENST00000556066 CCDC186Q7Z3E2 898 aa7.03□□□□□ -1.28
PSEN1-216ENST00000556066 TRMT11Q7Z4G4 463 aaKnown RBP7.03□□□□□ -1.28
PSEN1-216ENST00000556066 SCD5Q86SK9 330 aa7.03□□□□□ -1.28
PSEN1-216ENST00000556066 ETFBKMTQ8IXQ9 262 aa7.03□□□□□ -1.28
PSEN1-216ENST00000556066 TMEFF1Q8IYR6 380 aa7.03□□□□□ -1.28
PSEN1-216ENST00000556066 CHPFQ8IZ52 775 aa7.03□□□□□ -1.28
PSEN1-216ENST00000556066 FMR1NBQ8N0W7 255 aaPredicted RBP7.03□□□□□ -1.28
PSEN1-216ENST00000556066 TERB1Q8NA31 727 aa7.03□□□□□ -1.28
PSEN1-216ENST00000556066 PIGKQ92643 395 aa7.03□□□□□ -1.28
PSEN1-216ENST00000556066 SMARCE1Q969G3 411 aa7.03□□□□□ -1.28
PSEN1-216ENST00000556066 TMEM176AQ96HP8 235 aa7.03□□□□□ -1.28
PSEN1-216ENST00000556066 XPO6Q96QU8 1125 aaKnown RBP7.03□□□□□ -1.28
PSEN1-216ENST00000556066 PNPLA8Q9NP80 782 aa7.03□□□□□ -1.28
PSEN1-216ENST00000556066 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.03□□□□□ -1.28
PSEN1-216ENST00000556066 PLK2Q9NYY3 685 aa7.03□□□□□ -1.28
PSEN1-216ENST00000556066 WDR35Q9P2L0 1181 aa7.03□□□□□ -1.28
PSEN1-216ENST00000556066 RASAL2Q9UJF2 1139 aa7.03□□□□□ -1.28
PSEN1-216ENST00000556066 LNP1A1A4G5 178 aa7.02□□□□□ -1.29
PSEN1-216ENST00000556066 TRIM49BA6NDI0 452 aa7.02□□□□□ -1.29
PSEN1-216ENST00000556066 C4orf47A7E2U8 309 aa7.02□□□□□ -1.29
PSEN1-216ENST00000556066 PRRT4C9JH25 899 aa7.02□□□□□ -1.29
PSEN1-216ENST00000556066 CACNG3O60359 315 aa7.02□□□□□ -1.29
PSEN1-216ENST00000556066 GREM1O60565 184 aa7.02□□□□□ -1.29
PSEN1-216ENST00000556066 STC2O76061 302 aa7.02□□□□□ -1.29
PSEN1-216ENST00000556066 CD19P15391 556 aa7.02□□□□□ -1.29
PSEN1-216ENST00000556066 NTSR1P30989 418 aa7.02□□□□□ -1.29
PSEN1-216ENST00000556066 P2RY2P41231 377 aa7.02□□□□□ -1.29
PSEN1-216ENST00000556066 PTGER3P43115 390 aa7.02□□□□□ -1.29
PSEN1-216ENST00000556066 DGKGP49619 791 aa7.02□□□□□ -1.29
PSEN1-216ENST00000556066 PMS1P54277 932 aaKnown RBP7.02□□□□□ -1.29
PSEN1-216ENST00000556066 IRX4P78413 519 aa7.02□□□□□ -1.29
PSEN1-216ENST00000556066 NUCB2P80303 420 aa7.02□□□□□ -1.29
PSEN1-216ENST00000556066 COG7P83436 770 aa7.02□□□□□ -1.29
PSEN1-216ENST00000556066 FKBP3Q00688 224 aaKnown RBP7.02□□□□□ -1.29
PSEN1-216ENST00000556066 RPL6Q02878 288 aaKnown RBP7.02□□□□□ -1.29
PSEN1-216ENST00000556066 BYSLQ13895 437 aaKnown RBP7.02□□□□□ -1.29
PSEN1-216ENST00000556066 COL9A2Q14055 689 aaPredicted RBP7.02□□□□□ -1.29
PSEN1-216ENST00000556066 GOLGA7BQ2TAP0 167 aa7.02□□□□□ -1.29
PSEN1-216ENST00000556066 UAP1L1Q3KQV9 507 aa7.02□□□□□ -1.29
PSEN1-216ENST00000556066 CBWD6Q4V339 395 aa7.02□□□□□ -1.29
PSEN1-216ENST00000556066 CBWD3Q5JTY5 395 aa7.02□□□□□ -1.29
PSEN1-216ENST00000556066 CBWD5Q5RIA9 395 aa7.02□□□□□ -1.29
PSEN1-216ENST00000556066 ZNF658Q5TYW1 1059 aaPredicted RBP7.02□□□□□ -1.29
PSEN1-216ENST00000556066 ANKRD40Q6AI12 368 aa7.02□□□□□ -1.29
PSEN1-216ENST00000556066 KLHDC10Q6PID8 442 aa7.02□□□□□ -1.29
PSEN1-216ENST00000556066 TOGARAM2Q6ZUX3 1019 aa7.02□□□□□ -1.29
PSEN1-216ENST00000556066 TADA2BQ86TJ2 420 aa7.02□□□□□ -1.29
PSEN1-216ENST00000556066 PIGZQ86VD9 579 aa7.02□□□□□ -1.29
PSEN1-216ENST00000556066 TTC39CQ8N584 583 aa7.02□□□□□ -1.29
PSEN1-216ENST00000556066 DEFB119Q8N690 84 aa7.02□□□□□ -1.29
PSEN1-216ENST00000556066 SLC4A11Q8NBS3 891 aa7.02□□□□□ -1.29
PSEN1-216ENST00000556066 OLIG1Q8TAK6 271 aa7.02□□□□□ -1.29
PSEN1-216ENST00000556066 GBP4Q96PP9 640 aa7.02□□□□□ -1.29
PSEN1-216ENST00000556066 GSDMAQ96QA5 445 aa7.02□□□□□ -1.29
PSEN1-216ENST00000556066 KCTD15Q96SI1 283 aaPredicted RBP7.02□□□□□ -1.29
PSEN1-216ENST00000556066 CDK5RAP1Q96SZ6 601 aaKnown RBP7.02□□□□□ -1.29
PSEN1-216ENST00000556066 ACOX2Q99424 681 aa7.02□□□□□ -1.29
PSEN1-216ENST00000556066 PRDM16Q9HAZ2 1276 aa7.02□□□□□ -1.29
PSEN1-216ENST00000556066 CACNA2D2Q9NY47 1150 aa7.02□□□□□ -1.29
PSEN1-216ENST00000556066 MARCH2Q9P0N8 246 aa7.02□□□□□ -1.29
PSEN1-216ENST00000556066 HESX1Q9UBX0 185 aa7.02□□□□□ -1.29
PSEN1-216ENST00000556066 ARMCX3Q9UH62 379 aaPredicted RBP7.02□□□□□ -1.29
PSEN1-216ENST00000556066 MBD1Q9UIS9 605 aaPredicted RBP7.02□□□□□ -1.29
PSEN1-216ENST00000556066 HOOK1Q9UJC3 728 aaKnown RBP7.02□□□□□ -1.29
PSEN1-216ENST00000556066 STRIP2Q9ULQ0 834 aa7.02□□□□□ -1.29
PSEN1-216ENST00000556066 ATXN2Q99700 1313 aaKnown RBP7.01□□□□□ -1.29
PSEN1-216ENST00000556066 SLC12A8A0AV02 714 aa7.01□□□□□ -1.29
PSEN1-216ENST00000556066 TULP2O00295 520 aa7.01□□□□□ -1.29
PSEN1-216ENST00000556066 PSMA7O14818 248 aa7.01□□□□□ -1.29
PSEN1-216ENST00000556066 TM4SF5O14894 197 aa7.01□□□□□ -1.29
PSEN1-216ENST00000556066 SLC16A3O15427 465 aaKnown RBP7.01□□□□□ -1.29
PSEN1-216ENST00000556066 KCNK5O95279 499 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms