RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	CALB2	P22676	271 aa		12.65	□□□□□ -0.38
TMPO-212	ENST00000556029	ELK3	P41970	407 aa		12.65	□□□□□ -0.38
TMPO-212	ENST00000556029	POLN	Q7Z5Q5	900 aa		12.65	□□□□□ -0.38
TMPO-212	ENST00000556029	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	12.65	□□□□□ -0.38
TMPO-212	ENST00000556029	RMDN1	Q96DB5	314 aa		12.65	□□□□□ -0.38
TMPO-212	ENST00000556029	SMAD5	Q99717	465 aa	Known RBP	12.65	□□□□□ -0.38
TMPO-212	ENST00000556029	RERGL	Q9H628	205 aa		12.65	□□□□□ -0.38
TMPO-212	ENST00000556029	WDR35	Q9P2L0	1181 aa		12.65	□□□□□ -0.38
TMPO-212	ENST00000556029	SLC17A7	Q9P2U7	560 aa		12.65	□□□□□ -0.38
TMPO-212	ENST00000556029	GRID1	Q9ULK0	1009 aa		12.65	□□□□□ -0.38
TMPO-212	ENST00000556029	SIGLEC16	A6NMB1	481 aa		12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	MCCD1	P59942	119 aa	Predicted RBP	12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	PTPN20	Q4JDL3	420 aa		12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	BBS12	Q6ZW61	710 aa		12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	PRPF39	Q86UA1	669 aa	Known RBP	12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	LRRC6	Q86X45	466 aa		12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	SLC25A41	Q8N5S1	370 aa		12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	SLC35B2	Q8TB61	432 aa		12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	C10orf82	Q8WW14	230 aa		12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	NAF1	Q96HR8	494 aa	Known RBP	12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	PALMD	Q9NP74	551 aa		12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	CASS4	Q9NQ75	786 aa		12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	EURL	Q9NYK6	297 aa		12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	LACTBL1	A8MY62	500 aa		12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	KDM1A	O60341	852 aa		12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	LRCH4	O75427	683 aa		12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	WFS1	O76024	890 aa		12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	FARP2	O94887	1054 aa	Predicted RBP	12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	ATP6V1E1	P36543	226 aa		12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	SLC18A1	P54219	525 aa		12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	PWP1	Q13610	501 aa		12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	MOGS	Q13724	837 aa		12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	MSS51	Q4VC12	460 aa		12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	SCARA3	Q6AZY7	606 aa		12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	STK32A	Q8WU08	396 aa		12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	SCG3	Q8WXD2	468 aa	Known RBP	12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	TEPSIN	Q96N21	525 aa		12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	UNK	Q9C0B0	810 aa	Known RBP	12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	CNTN6	Q9UQ52	1028 aa		12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	SOWAHB	A6NEL2	793 aa		12.64	□□□□□ -0.39
TMPO-212	ENST00000556029		E5RI56	91 aa		12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	HNRNPCL1	O60812	293 aa	Known RBP	12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	B3GAT3	O94766	335 aa		12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	IL18RAP	O95256	599 aa		12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	ESRRB	O95718	433 aa		12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	CD48	P09326	243 aa		12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	ACAT1	P24752	427 aa	Known RBP	12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	TRPC1	P48995	793 aa		12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	PCSK7	Q16549	785 aa		12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	TLK2	Q86UE8	772 aa		12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	CLEC4F	Q8N1N0	589 aa		12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	ZNF560	Q96MR9	790 aa		12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	ABHD16B	Q9H3Z7	469 aa		12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	RSAD1	Q9HA92	442 aa		12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	NDFIP2	Q9NV92	336 aa		12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	SLC13A4	Q9UKG4	626 aa		12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	TRIM49D1	C9J1S8	452 aa		12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	ACKR2	O00590	384 aa		12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	C2CD2L	O14523	706 aa		12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	TYROBP	O43914	113 aa		12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	PGK1	P00558	417 aa		12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	ZNF132	P52740	706 aa		12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	DPYSL3	Q14195	570 aa		12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	USP10	Q14694	798 aa	Known RBP	12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	RNF148	Q8N7C7	305 aa		12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	ZNF570	Q96NI8	536 aa		12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	TASP1	Q9H6P5	420 aa		12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	TJP2	Q9UDY2	1190 aa		12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	USP18	Q9UMW8	372 aa		12.64	□□□□□ -0.39
TMPO-212	ENST00000556029	CLUH	O75153	1309 aa		12.63	□□□□□ -0.39
TMPO-212	ENST00000556029	SPDYE5	A6NIY4	337 aa		12.63	□□□□□ -0.39
TMPO-212	ENST00000556029	TTLL13P	A6NNM8	815 aa		12.63	□□□□□ -0.39
TMPO-212	ENST00000556029	SMAP	O00193	183 aa		12.63	□□□□□ -0.39
TMPO-212	ENST00000556029	ENTPD5	O75356	428 aa		12.63	□□□□□ -0.39
TMPO-212	ENST00000556029	PYGB	P11216	843 aa		12.63	□□□□□ -0.39
TMPO-212	ENST00000556029	BGN	P21810	368 aa		12.63	□□□□□ -0.39
TMPO-212	ENST00000556029	MIP	P30301	263 aa		12.63	□□□□□ -0.39
TMPO-212	ENST00000556029	LRRC74A	Q0VAA2	488 aa		12.63	□□□□□ -0.39
TMPO-212	ENST00000556029	CHI3L2	Q15782	390 aa		12.63	□□□□□ -0.39
TMPO-212	ENST00000556029	DCAF6	Q58WW2	860 aa		12.63	□□□□□ -0.39
TMPO-212	ENST00000556029	ADGRD1	Q6QNK2	874 aa		12.63	□□□□□ -0.39
TMPO-212	ENST00000556029	CXCL17	Q6UXB2	119 aa		12.63	□□□□□ -0.39
TMPO-212	ENST00000556029	TAS2R42	Q7RTR8	314 aa		12.63	□□□□□ -0.39
TMPO-212	ENST00000556029	IFT43	Q96FT9	208 aa		12.63	□□□□□ -0.39
TMPO-212	ENST00000556029	EXOSC4	Q9NPD3	245 aa	Known RBP	12.63	□□□□□ -0.39
TMPO-212	ENST00000556029	PNMA8B	Q9ULN7	279 aa	Predicted RBP	12.63	□□□□□ -0.39
TMPO-212	ENST00000556029	C17orf102	A2RUQ5	167 aa		12.63	□□□□□ -0.39
TMPO-212	ENST00000556029	RRN3P2	A6NIE6	340 aa		12.63	□□□□□ -0.39
TMPO-212	ENST00000556029	BTBD19	C9JJ37	291 aa		12.63	□□□□□ -0.39
TMPO-212	ENST00000556029	KBTBD13	C9JR72	458 aa		12.63	□□□□□ -0.39
TMPO-212	ENST00000556029	GAS2	O43903	313 aa	Known RBP	12.63	□□□□□ -0.39
TMPO-212	ENST00000556029	IL1R2	P27930	398 aa		12.63	□□□□□ -0.39
TMPO-212	ENST00000556029	RGS2	P41220	211 aa		12.63	□□□□□ -0.39
TMPO-212	ENST00000556029	FAAP100	Q0VG06	881 aa		12.63	□□□□□ -0.39
TMPO-212	ENST00000556029	TJAP1	Q5JTD0	557 aa		12.63	□□□□□ -0.39
TMPO-212	ENST00000556029	NPNT	Q6UXI9	565 aa		12.63	□□□□□ -0.39
TMPO-212	ENST00000556029	GTF3C2	Q8WUA4	911 aa	Predicted RBP	12.63	□□□□□ -0.39
TMPO-212	ENST00000556029	NSL1	Q96IY1	281 aa		12.63	□□□□□ -0.39
TMPO-212	ENST00000556029	TINF2	Q9BSI4	451 aa		12.63	□□□□□ -0.39

Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms