RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 RAB6CQ9H0N0 254 aa7.23□□□□□ -1.25
TDP1-213ENST00000555880 PLEKHA5Q9HAU0 1116 aa7.23□□□□□ -1.25
TDP1-213ENST00000555880 SIRPGQ9P1W8 387 aa7.23□□□□□ -1.25
TDP1-213ENST00000555880 AP4E1Q9UPM8 1137 aa7.23□□□□□ -1.25
TDP1-213ENST00000555880 DERAQ9Y315 318 aa7.23□□□□□ -1.25
TDP1-213ENST00000555880 PCDHA11Q9Y5I1 949 aa7.23□□□□□ -1.25
TDP1-213ENST00000555880 SNX9Q9Y5X1 595 aa7.23□□□□□ -1.25
TDP1-213ENST00000555880 PAPPA2Q9BXP8 1791 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 IQCA1LA6NCM1 817 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 HACD1B0YJ81 288 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 B2RBV5 119 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 SPECC1L-ADORA2AF8WAN1 911 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 H3BRJ5 948 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 SMNDC1O75940 238 aaKnown RBP eCLIP7.22□□□□□ -1.25
TDP1-213ENST00000555880 NEBLO76041 1014 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 MAP3K6O95382 1288 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 PSMG1O95456 288 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 C1QAP02745 245 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 ENO1P06733 434 aaKnown RBP7.22□□□□□ -1.25
TDP1-213ENST00000555880 CSH1P0DML2 217 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 CSH2P0DML3 217 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 L1CAMP32004 1257 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 EPHX2P34913 555 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 SCNN1AP37088 669 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 GRM5P41594 1212 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 ACADSBP45954 432 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 AQP5P55064 265 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 HDAC4P56524 1084 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 MRPS5P82675 430 aaKnown RBP7.22□□□□□ -1.25
TDP1-213ENST00000555880 MXRA7P84157 204 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 OCRLQ01968 901 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 SLC34A1Q06495 639 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 ARHGAP1Q07960 439 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 BST2Q10589 180 aaKnown RBP7.22□□□□□ -1.25
TDP1-213ENST00000555880 STX3Q13277 289 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 NAB1Q13506 487 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 SEMA5AQ13591 1074 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 RCN2Q14257 317 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 KPNB1Q14974 876 aaKnown RBP7.22□□□□□ -1.25
TDP1-213ENST00000555880 CA9Q16790 459 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 KHDC1Q4VXA5 237 aaKnown RBP7.22□□□□□ -1.25
TDP1-213ENST00000555880 STXBP5Q5T5C0 1151 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 KCNT2Q6UVM3 1135 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 CDHR3Q6ZTQ4 885 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 SLC26A9Q7LBE3 791 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 ALYREFQ86V81 257 aaKnown RBP7.22□□□□□ -1.25
TDP1-213ENST00000555880 ZNF410Q86VK4 478 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 UNC93AQ86WB7 457 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 TTC30AQ86WT1 665 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 TMPRSS6Q8IU80 811 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 CCNJLQ8IV13 435 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 APLFQ8IW19 511 aaPredicted RBP7.22□□□□□ -1.25
TDP1-213ENST00000555880 TMEM130Q8N3G9 435 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 LRRC52Q8N7C0 313 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 STKLD1Q8NE28 680 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 BEST2Q8NFU1 509 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 OR6B3Q8NGW1 331 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 ACMSDQ8TDX5 336 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 SLC35F5Q8WV83 523 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 TFB1MQ8WVM0 346 aaKnown RBP7.22□□□□□ -1.25
TDP1-213ENST00000555880 MRPL45Q9BRJ2 306 aaKnown RBP7.22□□□□□ -1.25
TDP1-213ENST00000555880 NAT9Q9BTE0 207 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 MECRQ9BV79 373 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 NMUR2Q9GZQ4 415 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 PRDM16Q9HAZ2 1276 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 PDGFCQ9NRA1 345 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 THAP1Q9NVV9 213 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 TAS2R1Q9NYW7 299 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 ZFATQ9P243 1243 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 ARMCX1Q9P291 453 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 TXNDC16Q9P2K2 825 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 TAGLN3Q9UI15 199 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 ANGPTL2Q9UKU9 493 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 HBS1LQ9Y450 684 aaKnown RBP7.22□□□□□ -1.25
TDP1-213ENST00000555880 NUMBLQ9Y6R0 609 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 SCN1AP35498 2009 aa7.22□□□□□ -1.25
TDP1-213ENST00000555880 C2orf71A6NGG8 1288 aa7.21□□□□□ -1.25
TDP1-213ENST00000555880 SDR42E2A6NKP2 422 aa7.21□□□□□ -1.25
TDP1-213ENST00000555880 CAPN9O14815 690 aa7.21□□□□□ -1.25
TDP1-213ENST00000555880 PAPSS1O43252 624 aaPredicted RBP7.21□□□□□ -1.25
TDP1-213ENST00000555880 MAGEC1O60732 1142 aa7.21□□□□□ -1.25
TDP1-213ENST00000555880 ZNF189O75820 626 aaPredicted RBP7.21□□□□□ -1.25
TDP1-213ENST00000555880 METTL18O95568 372 aa7.21□□□□□ -1.25
TDP1-213ENST00000555880 BPGMP07738 259 aa7.21□□□□□ -1.25
TDP1-213ENST00000555880 ZNF286BP0CG31 522 aa7.21□□□□□ -1.25
TDP1-213ENST00000555880 KITP10721 976 aa7.21□□□□□ -1.25
TDP1-213ENST00000555880 MLNP12872 115 aa7.21□□□□□ -1.25
TDP1-213ENST00000555880 YBX3P16989 372 aaKnown RBP eCLIP7.21□□□□□ -1.25
TDP1-213ENST00000555880 PAX7P23759 505 aa7.21□□□□□ -1.25
TDP1-213ENST00000555880 GCKP35557 465 aa7.21□□□□□ -1.25
TDP1-213ENST00000555880 BCAT1P54687 386 aa7.21□□□□□ -1.25
TDP1-213ENST00000555880 GBE1Q04446 702 aa7.21□□□□□ -1.25
TDP1-213ENST00000555880 KLC1Q07866 573 aa7.21□□□□□ -1.25
TDP1-213ENST00000555880 WASHC5Q12768 1159 aa7.21□□□□□ -1.25
TDP1-213ENST00000555880 TRMT5Q32P41 509 aaKnown RBP7.21□□□□□ -1.25
TDP1-213ENST00000555880 PKDCCQ504Y2 493 aa7.21□□□□□ -1.25
TDP1-213ENST00000555880 TEX44Q53QW1 395 aa7.21□□□□□ -1.25
TDP1-213ENST00000555880 SNX30Q5VWJ9 437 aa7.21□□□□□ -1.25
TDP1-213ENST00000555880 ARHGAP17Q68EM7 881 aa7.21□□□□□ -1.25
TDP1-213ENST00000555880 MTHFD1LQ6UB35 978 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms