RNA–Protein interactions for RNA: ENST00000555855.5

FOXN3-211, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-211ENST00000555855 MPPE1Q53F39 396 aa20.33■□□□□ 0.85
FOXN3-211ENST00000555855 CACUL1Q86Y37 369 aa20.33■□□□□ 0.85
FOXN3-211ENST00000555855 HNRNPLLQ8WVV9 542 aaKnown RBP20.33■□□□□ 0.85
FOXN3-211ENST00000555855 SORCS1Q8WY21 1168 aa20.33■□□□□ 0.85
FOXN3-211ENST00000555855 MMRN2Q9H8L6 949 aa20.33■□□□□ 0.85
FOXN3-211ENST00000555855 CLEC4EQ9ULY5 219 aa20.33■□□□□ 0.85
FOXN3-211ENST00000555855 TRAF3IP3Q9Y228 551 aa20.33■□□□□ 0.85
FOXN3-211ENST00000555855 FNDC3AQ9Y2H6 1198 aaKnown RBP20.33■□□□□ 0.85
FOXN3-211ENST00000555855 URB1O60287 2271 aaKnown RBP20.32■□□□□ 0.84
FOXN3-211ENST00000555855 GOLGA8CPA6NN73 597 aa20.32■□□□□ 0.84
FOXN3-211ENST00000555855 MYL1P05976 194 aa20.32■□□□□ 0.84
FOXN3-211ENST00000555855 NR2F2P24468 414 aa20.32■□□□□ 0.84
FOXN3-211ENST00000555855 RPL13P26373 211 aaKnown RBP20.32■□□□□ 0.84
FOXN3-211ENST00000555855 HARS2P49590 506 aaKnown RBP20.32■□□□□ 0.84
FOXN3-211ENST00000555855 YWHAGP61981 247 aaKnown RBP eCLIP20.32■□□□□ 0.84
FOXN3-211ENST00000555855 BNC1Q01954 994 aa20.32■□□□□ 0.84
FOXN3-211ENST00000555855 GALNT15Q8N3T1 639 aa20.32■□□□□ 0.84
FOXN3-211ENST00000555855 ENGASEQ8NFI3 743 aa20.32■□□□□ 0.84
FOXN3-211ENST00000555855 C1orf216Q8TAB5 229 aa20.32■□□□□ 0.84
FOXN3-211ENST00000555855 PLD4Q96BZ4 506 aa20.32■□□□□ 0.84
FOXN3-211ENST00000555855 LHX5Q9H2C1 402 aa20.32■□□□□ 0.84
FOXN3-211ENST00000555855 USP25Q9UHP3 1055 aa20.32■□□□□ 0.84
FOXN3-211ENST00000555855 ACTN4O43707 911 aaKnown RBP20.31■□□□□ 0.84
FOXN3-211ENST00000555855 CENPBP07199 599 aaPredicted RBP20.31■□□□□ 0.84
FOXN3-211ENST00000555855 ATXN1LP0C7T5 689 aaKnown RBP20.31■□□□□ 0.84
FOXN3-211ENST00000555855 TRIM49P0CI25 452 aa20.31■□□□□ 0.84
FOXN3-211ENST00000555855 TRIM49CP0CI26 452 aa20.31■□□□□ 0.84
FOXN3-211ENST00000555855 ZSCAN22P10073 491 aaPredicted RBP20.31■□□□□ 0.84
FOXN3-211ENST00000555855 PSMC2P35998 433 aaKnown RBP20.31■□□□□ 0.84
FOXN3-211ENST00000555855 ENPEPQ07075 957 aa20.31■□□□□ 0.84
FOXN3-211ENST00000555855 PPP3CAQ08209 521 aa20.31■□□□□ 0.84
FOXN3-211ENST00000555855 FNDC3BQ53EP0 1204 aaKnown RBP20.31■□□□□ 0.84
FOXN3-211ENST00000555855 PIGZQ86VD9 579 aa20.31■□□□□ 0.84
FOXN3-211ENST00000555855 FAM186BQ8IYM0 893 aa20.31■□□□□ 0.84
FOXN3-211ENST00000555855 TMA16Q96EY4 203 aaKnown RBP20.31■□□□□ 0.84
FOXN3-211ENST00000555855 TMEM176AQ96HP8 235 aa20.31■□□□□ 0.84
FOXN3-211ENST00000555855 FAXDC2Q96IV6 333 aa20.31■□□□□ 0.84
FOXN3-211ENST00000555855 OLA1Q9NTK5 396 aaKnown RBP20.31■□□□□ 0.84
FOXN3-211ENST00000555855 RAXQ9Y2V3 346 aa20.31■□□□□ 0.84
FOXN3-211ENST00000555855 PTPRBP23467 1997 aa20.3■□□□□ 0.84
FOXN3-211ENST00000555855 TSPAN3O60637 253 aa20.3■□□□□ 0.84
FOXN3-211ENST00000555855 ZBED1O96006 694 aa20.3■□□□□ 0.84
FOXN3-211ENST00000555855 F13A1P00488 732 aa20.3■□□□□ 0.84
FOXN3-211ENST00000555855 HLA-EP13747 358 aa20.3■□□□□ 0.84
FOXN3-211ENST00000555855 ZNF445P59923 1031 aa20.3■□□□□ 0.84
FOXN3-211ENST00000555855 CAMK2GQ13555 558 aaPredicted RBP20.3■□□□□ 0.84
FOXN3-211ENST00000555855 KIF19Q2TAC6 998 aa20.3■□□□□ 0.84
FOXN3-211ENST00000555855 SOWAHCQ53LP3 525 aaPredicted RBP20.3■□□□□ 0.84
FOXN3-211ENST00000555855 RAB41Q5JT25 222 aa20.3■□□□□ 0.84
FOXN3-211ENST00000555855 TMEM215Q68D42 235 aa20.3■□□□□ 0.84
FOXN3-211ENST00000555855 KRT39Q6A163 491 aa20.3■□□□□ 0.84
FOXN3-211ENST00000555855 RBBP8NLQ8NC74 664 aaPredicted RBP20.3■□□□□ 0.84
FOXN3-211ENST00000555855 BAHD1Q8TBE0 780 aaPredicted RBP20.3■□□□□ 0.84
FOXN3-211ENST00000555855 WFIKKN2Q8TEU8 576 aa20.3■□□□□ 0.84
FOXN3-211ENST00000555855 RNF139Q8WU17 664 aa20.3■□□□□ 0.84
FOXN3-211ENST00000555855 ARID3AQ99856 593 aa20.3■□□□□ 0.84
FOXN3-211ENST00000555855 BTBD1Q9H0C5 482 aa20.3■□□□□ 0.84
FOXN3-211ENST00000555855 C6orf106Q9H6K1 298 aaPredicted RBP20.3■□□□□ 0.84
FOXN3-211ENST00000555855 TMEM8AQ9HCN3 771 aa20.3■□□□□ 0.84
FOXN3-211ENST00000555855 OSGEPQ9NPF4 335 aa20.3■□□□□ 0.84
FOXN3-211ENST00000555855 RCOR1Q9UKL0 485 aa20.3■□□□□ 0.84
FOXN3-211ENST00000555855 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.3■□□□□ 0.84
FOXN3-211ENST00000555855 ANKRD6Q9Y2G4 727 aa20.3■□□□□ 0.84
FOXN3-211ENST00000555855 EIF4E1BA6NMX2 242 aaKnown RBP20.29■□□□□ 0.84
FOXN3-211ENST00000555855 DNTTP04053 509 aa20.29■□□□□ 0.84
FOXN3-211ENST00000555855 GTF2H1P32780 548 aa20.29■□□□□ 0.84
FOXN3-211ENST00000555855 ACSL1P33121 698 aa20.29■□□□□ 0.84
FOXN3-211ENST00000555855 TKTL1P51854 596 aa20.29■□□□□ 0.84
FOXN3-211ENST00000555855 ZBTB16Q05516 673 aa20.29■□□□□ 0.84
FOXN3-211ENST00000555855 PDE4CQ08493 712 aa20.29■□□□□ 0.84
FOXN3-211ENST00000555855 ADAM9Q13443 819 aa20.29■□□□□ 0.84
FOXN3-211ENST00000555855 TRIP4Q15650 581 aaPredicted RBP20.29■□□□□ 0.84
FOXN3-211ENST00000555855 NFIL3Q16649 462 aa20.29■□□□□ 0.84
FOXN3-211ENST00000555855 ARHGAP17Q68EM7 881 aa20.29■□□□□ 0.84
FOXN3-211ENST00000555855 CHST9Q7L1S5 443 aa20.29■□□□□ 0.84
FOXN3-211ENST00000555855 FAM217AQ8IXS0 508 aa20.29■□□□□ 0.84
FOXN3-211ENST00000555855 ANKRD52Q8NB46 1076 aa20.29■□□□□ 0.84
FOXN3-211ENST00000555855 FBRSQ9HAH7 460 aa20.29■□□□□ 0.84
FOXN3-211ENST00000555855 LRRC4Q9HBW1 653 aa20.29■□□□□ 0.84
FOXN3-211ENST00000555855 CISHQ9NSE2 258 aa20.29■□□□□ 0.84
FOXN3-211ENST00000555855 DKK4Q9UBT3 224 aa20.29■□□□□ 0.84
FOXN3-211ENST00000555855 SUN2Q9UH99 717 aa20.29■□□□□ 0.84
FOXN3-211ENST00000555855 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.29■□□□□ 0.84
FOXN3-211ENST00000555855 SNX11Q9Y5W9 270 aa20.29■□□□□ 0.84
FOXN3-211ENST00000555855 CKAP5Q14008 2032 aa20.29■□□□□ 0.84
FOXN3-211ENST00000555855 TRABD2BA6NFA1 517 aa20.28■□□□□ 0.84
FOXN3-211ENST00000555855 TNFSF14O43557 240 aa20.28■□□□□ 0.84
FOXN3-211ENST00000555855 HSP90AA1P07900 732 aaKnown RBP20.28■□□□□ 0.84
FOXN3-211ENST00000555855 NUMA1Q14980 2115 aa20.28■□□□□ 0.84
FOXN3-211ENST00000555855 PM20D1Q6GTS8 502 aa20.28■□□□□ 0.84
FOXN3-211ENST00000555855 ADAT2Q7Z6V5 191 aaKnown RBP20.28■□□□□ 0.84
FOXN3-211ENST00000555855 FMNL3Q8IVF7 1028 aa20.28■□□□□ 0.84
FOXN3-211ENST00000555855 SLC4A11Q8NBS3 891 aa20.28■□□□□ 0.84
FOXN3-211ENST00000555855 TM9SF3Q9HD45 589 aa20.28■□□□□ 0.84
FOXN3-211ENST00000555855 SCUBE2Q9NQ36 999 aa20.28■□□□□ 0.84
FOXN3-211ENST00000555855 TOR4AQ9NXH8 423 aa20.28■□□□□ 0.84
FOXN3-211ENST00000555855 HBS1LQ9Y450 684 aaKnown RBP20.28■□□□□ 0.84
FOXN3-211ENST00000555855 KNTC1P50748 2209 aa20.27■□□□□ 0.84
FOXN3-211ENST00000555855 APC2O95996 2303 aa20.27■□□□□ 0.84
FOXN3-211ENST00000555855 A0A1B0GVL5 298 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms