RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 E2F1Q01094 437 aa3.89□□□□□ -1.79
SRP54-209ENST00000555746 DPTQ07507 201 aa3.89□□□□□ -1.79
SRP54-209ENST00000555746 KCNJ12Q14500 433 aa3.89□□□□□ -1.79
SRP54-209ENST00000555746 TBC1D25Q3MII6 688 aa3.89□□□□□ -1.79
SRP54-209ENST00000555746 TRIM60Q495X7 471 aa3.89□□□□□ -1.79
SRP54-209ENST00000555746 AASDHQ4L235 1098 aaPredicted RBP3.89□□□□□ -1.79
SRP54-209ENST00000555746 AARS2Q5JTZ9 985 aaKnown RBP3.89□□□□□ -1.79
SRP54-209ENST00000555746 FAM90A2PQ658T7 463 aa3.89□□□□□ -1.79
SRP54-209ENST00000555746 LIN54Q6MZP7 749 aa3.89□□□□□ -1.79
SRP54-209ENST00000555746 DPY19L3Q6ZPD9 716 aa3.89□□□□□ -1.79
SRP54-209ENST00000555746 PTCHD4Q6ZW05 846 aa3.89□□□□□ -1.79
SRP54-209ENST00000555746 GRASPQ7Z6J2 395 aaPredicted RBP3.89□□□□□ -1.79
SRP54-209ENST00000555746 MRGPRGQ86SM5 289 aa3.89□□□□□ -1.79
SRP54-209ENST00000555746 CLASRPQ8N2M8 674 aaKnown RBP3.89□□□□□ -1.79
SRP54-209ENST00000555746 FSTL5Q8N475 847 aaPredicted RBP3.89□□□□□ -1.79
SRP54-209ENST00000555746 MYCT1Q8N699 235 aa3.89□□□□□ -1.79
SRP54-209ENST00000555746 SIRT6Q8N6T7 355 aa3.89□□□□□ -1.79
SRP54-209ENST00000555746 C11orf44Q8N8P7 122 aa3.89□□□□□ -1.79
SRP54-209ENST00000555746 TRAPPC12Q8WVT3 735 aa3.89□□□□□ -1.79
SRP54-209ENST00000555746 OVCA2Q8WZ82 227 aa3.89□□□□□ -1.79
SRP54-209ENST00000555746 TBC1D5Q92609 795 aa3.89□□□□□ -1.79
SRP54-209ENST00000555746 BBC3Q96PG8 261 aaPredicted RBP3.89□□□□□ -1.79
SRP54-209ENST00000555746 LENG8Q96PV6 779 aaPredicted RBP3.89□□□□□ -1.79
SRP54-209ENST00000555746 TIMP4Q99727 224 aa3.89□□□□□ -1.79
SRP54-209ENST00000555746 ISCA1Q9BUE6 129 aa3.89□□□□□ -1.79
SRP54-209ENST00000555746 KRTAP4-11Q9BYQ6 195 aa3.89□□□□□ -1.79
SRP54-209ENST00000555746 KRTAP4-5Q9BYR2 181 aa3.89□□□□□ -1.79
SRP54-209ENST00000555746 PCED1AQ9H1Q7 454 aa3.89□□□□□ -1.79
SRP54-209ENST00000555746 MYLK2Q9H1R3 596 aa3.89□□□□□ -1.79
SRP54-209ENST00000555746 FSCN3Q9NQT6 498 aa3.89□□□□□ -1.79
SRP54-209ENST00000555746 LRFN1Q9P244 771 aa3.89□□□□□ -1.79
SRP54-209ENST00000555746 GRHPRQ9UBQ7 328 aa3.89□□□□□ -1.79
SRP54-209ENST00000555746 HERC5Q9UII4 1024 aaKnown RBP3.89□□□□□ -1.79
SRP54-209ENST00000555746 SCAF8Q9UPN6 1271 aaKnown RBP3.89□□□□□ -1.79
SRP54-209ENST00000555746 MORC2Q9Y6X9 1032 aaPredicted RBP3.89□□□□□ -1.79
SRP54-209ENST00000555746 GPATCH8Q9UKJ3 1502 aaKnown RBP3.89□□□□□ -1.79
SRP54-209ENST00000555746 TMEM131LA2VDJ0 1609 aa3.88□□□□□ -1.79
SRP54-209ENST00000555746 LAMC1P11047 1609 aa3.88□□□□□ -1.79
SRP54-209ENST00000555746 ABCC5O15440 1437 aa3.88□□□□□ -1.79
SRP54-209ENST00000555746 A0A087X1B8 175 aa3.88□□□□□ -1.79
SRP54-209ENST00000555746 PNMA6EA0A0J9YXQ4 647 aa3.88□□□□□ -1.79
SRP54-209ENST00000555746 GXYLT2A0PJZ3 443 aa3.88□□□□□ -1.79
SRP54-209ENST00000555746 J3KTA2 159 aa3.88□□□□□ -1.79
SRP54-209ENST00000555746 TRIM38O00635 465 aa3.88□□□□□ -1.79
SRP54-209ENST00000555746 TMPRSS11DO60235 418 aa3.88□□□□□ -1.79
SRP54-209ENST00000555746 TAF5LO75529 589 aa3.88□□□□□ -1.79
SRP54-209ENST00000555746 LMNAP02545 664 aaKnown RBP3.88□□□□□ -1.79
SRP54-209ENST00000555746 FGAP02671 866 aa3.88□□□□□ -1.79
SRP54-209ENST00000555746 NPSP0C0P6 89 aa3.88□□□□□ -1.79
SRP54-209ENST00000555746 FAM163BP0C2L3 166 aa3.88□□□□□ -1.79
SRP54-209ENST00000555746 CREB1P16220 341 aa3.88□□□□□ -1.79
SRP54-209ENST00000555746 NDUFB7P17568 137 aa3.88□□□□□ -1.79
SRP54-209ENST00000555746 WT1P19544 449 aaPredicted RBP3.88□□□□□ -1.79
SRP54-209ENST00000555746 DRD4P21917 467 aa3.88□□□□□ -1.79
SRP54-209ENST00000555746 ADRA1DP25100 572 aa3.88□□□□□ -1.79
SRP54-209ENST00000555746 PBX1P40424 430 aa3.88□□□□□ -1.79
SRP54-209ENST00000555746 GDF5P43026 501 aa3.88□□□□□ -1.79
SRP54-209ENST00000555746 CCT8P50990 548 aa3.88□□□□□ -1.79
SRP54-209ENST00000555746 INHBCP55103 352 aa3.88□□□□□ -1.79
SRP54-209ENST00000555746 SOX10P56693 466 aa3.88□□□□□ -1.79
SRP54-209ENST00000555746 EEFSECP57772 596 aaKnown RBP3.88□□□□□ -1.79
SRP54-209ENST00000555746 TMEM95Q3KNT9 176 aa3.88□□□□□ -1.79
SRP54-209ENST00000555746 GRHL2Q6ISB3 625 aa3.88□□□□□ -1.79
SRP54-209ENST00000555746 ZNF804AQ7Z570 1209 aa3.88□□□□□ -1.79
SRP54-209ENST00000555746 SFTPA1Q8IWL2 248 aa3.88□□□□□ -1.79
SRP54-209ENST00000555746 NRSN1Q8IZ57 195 aa3.88□□□□□ -1.79
SRP54-209ENST00000555746 PNPLA1Q8N8W4 532 aa3.88□□□□□ -1.79
SRP54-209ENST00000555746 ANKRD42Q8N9B4 389 aa3.88□□□□□ -1.79
SRP54-209ENST00000555746 ABHD11Q8NFV4 315 aa3.88□□□□□ -1.79
SRP54-209ENST00000555746 OTUD7AQ8TE49 926 aaPredicted RBP3.88□□□□□ -1.79
SRP54-209ENST00000555746 CCT6BQ92526 530 aa3.88□□□□□ -1.79
SRP54-209ENST00000555746 LTV1Q96GA3 475 aaPredicted RBP3.88□□□□□ -1.79
SRP54-209ENST00000555746 VPS50Q96JG6 964 aa3.88□□□□□ -1.79
SRP54-209ENST00000555746 TTPALQ9BTX7 342 aa3.88□□□□□ -1.79
SRP54-209ENST00000555746 KRTAP9-8Q9BYQ0 159 aa3.88□□□□□ -1.79
SRP54-209ENST00000555746 LPAR3Q9UBY5 353 aa3.88□□□□□ -1.79
SRP54-209ENST00000555746 AMFRQ9UKV5 643 aa3.88□□□□□ -1.79
SRP54-209ENST00000555746 ADAMTS5Q9UNA0 930 aa3.88□□□□□ -1.79
SRP54-209ENST00000555746 DCCP43146 1447 aa3.87□□□□□ -1.79
SRP54-209ENST00000555746 COL11A2P13942 1736 aaPredicted RBP3.87□□□□□ -1.79
SRP54-209ENST00000555746 CDC42BPBQ9Y5S2 1711 aa3.87□□□□□ -1.79
SRP54-209ENST00000555746 MYOM2P54296 1465 aa3.87□□□□□ -1.79
SRP54-209ENST00000555746 ARHGAP5Q13017 1502 aa3.87□□□□□ -1.79
SRP54-209ENST00000555746 FAM90A18PA6NE21 464 aa3.87□□□□□ -1.79
SRP54-209ENST00000555746 FAM90A16PA6NEW6 464 aa3.87□□□□□ -1.79
SRP54-209ENST00000555746 FAM90A9PA6NNJ1 464 aa3.87□□□□□ -1.79
SRP54-209ENST00000555746 FAM90A5PA8MXJ8 464 aa3.87□□□□□ -1.79
SRP54-209ENST00000555746 AP4M1O00189 453 aa3.87□□□□□ -1.79
SRP54-209ENST00000555746 ZNF213O14771 459 aa3.87□□□□□ -1.79
SRP54-209ENST00000555746 MGST3O14880 152 aa3.87□□□□□ -1.79
SRP54-209ENST00000555746 CTIFO43310 598 aaKnown RBP3.87□□□□□ -1.79
SRP54-209ENST00000555746 DNPH1O43598 174 aa3.87□□□□□ -1.79
SRP54-209ENST00000555746 RAMP2O60895 175 aa3.87□□□□□ -1.79
SRP54-209ENST00000555746 USP1O94782 785 aa3.87□□□□□ -1.79
SRP54-209ENST00000555746 FAM90A15PP0C7V4 464 aa3.87□□□□□ -1.79
SRP54-209ENST00000555746 FAM90A14PP0C7W9 464 aa3.87□□□□□ -1.79
SRP54-209ENST00000555746 EBLN1P0CF75 366 aa3.87□□□□□ -1.79
SRP54-209ENST00000555746 ENGP17813 658 aa3.87□□□□□ -1.79
SRP54-209ENST00000555746 CXCR5P32302 372 aa3.87□□□□□ -1.79
SRP54-209ENST00000555746 CTCFP49711 727 aaPredicted RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms