RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 TEX35Q5T0J7 233 aa10.58□□□□□ -0.72
SRP54-208ENST00000555557 MAP7D3Q8IWC1 876 aa10.58□□□□□ -0.72
SRP54-208ENST00000555557 ARL14EPQ8N8R7 260 aaPredicted RBP10.58□□□□□ -0.72
SRP54-208ENST00000555557 MAB21L3Q8N8X9 362 aa10.58□□□□□ -0.72
SRP54-208ENST00000555557 PRELID2Q8N945 189 aa10.58□□□□□ -0.72
SRP54-208ENST00000555557 PCDH19Q8TAB3 1148 aa10.58□□□□□ -0.72
SRP54-208ENST00000555557 ATG4AQ8WYN0 398 aa10.58□□□□□ -0.72
SRP54-208ENST00000555557 NTAN1Q96AB6 310 aa10.58□□□□□ -0.72
SRP54-208ENST00000555557 KRT12Q99456 494 aa10.58□□□□□ -0.72
SRP54-208ENST00000555557 NAP1L3Q99457 506 aaPredicted RBP10.58□□□□□ -0.72
SRP54-208ENST00000555557 HINFPQ9BQA5 517 aa10.58□□□□□ -0.72
SRP54-208ENST00000555557 APOL5Q9BWW9 433 aa10.58□□□□□ -0.72
SRP54-208ENST00000555557 MAK16Q9BXY0 300 aaKnown RBP10.58□□□□□ -0.72
SRP54-208ENST00000555557 DDX47Q9H0S4 455 aaKnown RBP10.58□□□□□ -0.72
SRP54-208ENST00000555557 EPC1Q9H2F5 836 aa10.58□□□□□ -0.72
SRP54-208ENST00000555557 SMPD4Q9NXE4 827 aa10.58□□□□□ -0.72
SRP54-208ENST00000555557 XIRP2A4UGR9 3374 aa10.58□□□□□ -0.72
SRP54-208ENST00000555557 DOCK6Q96HP0 2047 aa10.57□□□□□ -0.72
SRP54-208ENST00000555557 TJP3O95049 919 aa10.57□□□□□ -0.72
SRP54-208ENST00000555557 RHOP08100 348 aa10.57□□□□□ -0.72
SRP54-208ENST00000555557 SRGAP2BP0DMP2 458 aa10.57□□□□□ -0.72
SRP54-208ENST00000555557 PTPN2P17706 415 aa10.57□□□□□ -0.72
SRP54-208ENST00000555557 AMPD1P23109 780 aa10.57□□□□□ -0.72
SRP54-208ENST00000555557 PPP3CCP48454 512 aa10.57□□□□□ -0.72
SRP54-208ENST00000555557 ZXDBP98169 803 aa10.57□□□□□ -0.72
SRP54-208ENST00000555557 SCAPQ12770 1279 aa10.57□□□□□ -0.72
SRP54-208ENST00000555557 SNX1Q13596 522 aa10.57□□□□□ -0.72
SRP54-208ENST00000555557 PPP2R5DQ14738 602 aa10.57□□□□□ -0.72
SRP54-208ENST00000555557 TRIP4Q15650 581 aaPredicted RBP10.57□□□□□ -0.72
SRP54-208ENST00000555557 PPP2R5EQ16537 467 aa10.57□□□□□ -0.72
SRP54-208ENST00000555557 SLC5A9Q2M3M2 681 aa10.57□□□□□ -0.72
SRP54-208ENST00000555557 TCEAL5Q5H9L2 206 aa10.57□□□□□ -0.72
SRP54-208ENST00000555557 BRMS1LQ5PSV4 323 aa10.57□□□□□ -0.72
SRP54-208ENST00000555557 TMC5Q6UXY8 1006 aa10.57□□□□□ -0.72
SRP54-208ENST00000555557 GRASPQ7Z6J2 395 aaPredicted RBP10.57□□□□□ -0.72
SRP54-208ENST00000555557 PQLC3Q8N755 202 aa10.57□□□□□ -0.72
SRP54-208ENST00000555557 TTC16Q8NEE8 873 aa10.57□□□□□ -0.72
SRP54-208ENST00000555557 MYRIPQ8NFW9 859 aa10.57□□□□□ -0.72
SRP54-208ENST00000555557 FAM71BQ8TC56 605 aa10.57□□□□□ -0.72
SRP54-208ENST00000555557 TSC1Q92574 1164 aa10.57□□□□□ -0.72
SRP54-208ENST00000555557 ZNF707Q96C28 371 aaPredicted RBP10.57□□□□□ -0.72
SRP54-208ENST00000555557 CSPG4P5Q96PW8 444 aa10.57□□□□□ -0.72
SRP54-208ENST00000555557 RNF157Q96PX1 679 aa10.57□□□□□ -0.72
SRP54-208ENST00000555557 PRKD2Q9BZL6 878 aa10.57□□□□□ -0.72
SRP54-208ENST00000555557 PRDM12Q9H4Q4 367 aa10.57□□□□□ -0.72
SRP54-208ENST00000555557 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.57□□□□□ -0.72
SRP54-208ENST00000555557 OR12D3Q9UGF7 316 aa10.57□□□□□ -0.72
SRP54-208ENST00000555557 REV3LO60673 3130 aa10.57□□□□□ -0.72
SRP54-208ENST00000555557 SCAMP3O14828 347 aaKnown RBP10.56□□□□□ -0.72
SRP54-208ENST00000555557 LINC01565O15544 149 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 MAP3K6O95382 1288 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 C1RP00736 705 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 HNRNPA1P09651 372 aaKnown RBP eCLIP10.56□□□□□ -0.72
SRP54-208ENST00000555557 IRF1P10914 325 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 MBL2P11226 248 aaPredicted RBP10.56□□□□□ -0.72
SRP54-208ENST00000555557 HDCP19113 662 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 HOXA9P31269 272 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 PTPN7P35236 360 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 KCNJ1P48048 391 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 TUBP50607 506 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 AIF1P55008 147 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 HYAL1Q12794 435 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 KCNC3Q14003 757 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 ERCC6LQ2NKX8 1250 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 KLHDC10Q6PID8 442 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 C1orf228Q6PIY5 440 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 NPNTQ6UXI9 565 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 PDZD4Q76G19 769 aaPredicted RBP10.56□□□□□ -0.72
SRP54-208ENST00000555557 TADA2BQ86TJ2 420 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 PSTKQ8IV42 348 aaKnown RBP10.56□□□□□ -0.72
SRP54-208ENST00000555557 ZNF276Q8N554 614 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 CCDC33Q8N5R6 958 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 NETO2Q8NC67 525 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 SHKBP1Q8TBC3 707 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 MRPS31Q92665 395 aaKnown RBP10.56□□□□□ -0.72
SRP54-208ENST00000555557 WBP2Q969T9 261 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 MAGOHBQ96A72 148 aaKnown RBP10.56□□□□□ -0.72
SRP54-208ENST00000555557 CDK5RAP1Q96SZ6 601 aaKnown RBP10.56□□□□□ -0.72
SRP54-208ENST00000555557 ZNF670Q9BS34 389 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 TTYH1Q9H313 450 aaPredicted RBP10.56□□□□□ -0.72
SRP54-208ENST00000555557 ETNK2Q9NVF9 386 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 CDH22Q9UJ99 828 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 MFHAS1Q9Y4C4 1052 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 HS3ST4Q9Y661 456 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 GOLGA6L7A0A1B0GV03 622 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 EFCAB8A8MWE9 144 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 EEF2KO00418 725 aaKnown RBP10.56□□□□□ -0.72
SRP54-208ENST00000555557 XYLBO75191 536 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 MOSPD3O75425 235 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 LRIG2O94898 1065 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 GLP2RO95838 553 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 IGLV3-27P01718 113 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 APOEP02649 317 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 RHOXF2BP0C7M4 288 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 PECAM1P16284 738 aaPredicted RBP10.56□□□□□ -0.72
SRP54-208ENST00000555557 CDC25CP30307 473 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 ARL4AP40617 200 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 SEMA3BQ13214 749 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 NNTQ13423 1086 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 GRIN2CQ14957 1233 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms