RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, human

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-222	ENST00000555506	KTI12	Q96EK9	354 aa	Predicted RBP	4.92	□□□□□ -1.62
KTN1-222	ENST00000555506		Q96MF0	132 aa		4.92	□□□□□ -1.62
KTN1-222	ENST00000555506	AGAP2	Q99490	1192 aa		4.92	□□□□□ -1.62
KTN1-222	ENST00000555506	REEP2	Q9BRK0	252 aa		4.92	□□□□□ -1.62
KTN1-222	ENST00000555506	AIFM2	Q9BRQ8	373 aa		4.92	□□□□□ -1.62
KTN1-222	ENST00000555506	WDR11	Q9BZH6	1224 aa		4.92	□□□□□ -1.62
KTN1-222	ENST00000555506	JMJD4	Q9H9V9	463 aa		4.92	□□□□□ -1.62
KTN1-222	ENST00000555506	SMC4	Q9NTJ3	1288 aa		4.92	□□□□□ -1.62
KTN1-222	ENST00000555506	FBXO9	Q9UK97	447 aa	Predicted RBP	4.92	□□□□□ -1.62
KTN1-222	ENST00000555506	DMRT1	Q9Y5R6	373 aa		4.92	□□□□□ -1.62
KTN1-222	ENST00000555506	TMEM191C	A6NGB0	347 aa		4.91	□□□□□ -1.62
KTN1-222	ENST00000555506	MBD3L5	A6NJ08	208 aa	Predicted RBP	4.91	□□□□□ -1.62
KTN1-222	ENST00000555506	NKX2-8	O15522	239 aa		4.91	□□□□□ -1.62
KTN1-222	ENST00000555506	CA12	O43570	354 aa		4.91	□□□□□ -1.62
KTN1-222	ENST00000555506	TSPAN3	O60637	253 aa		4.91	□□□□□ -1.62
KTN1-222	ENST00000555506	RAMP2	O60895	175 aa		4.91	□□□□□ -1.62
KTN1-222	ENST00000555506	DLD	P09622	509 aa	Known RBP	4.91	□□□□□ -1.62
KTN1-222	ENST00000555506	FAM163B	P0C2L3	166 aa		4.91	□□□□□ -1.62
KTN1-222	ENST00000555506	ALAD	P13716	330 aa		4.91	□□□□□ -1.62
KTN1-222	ENST00000555506	MAN1A1	P33908	653 aa		4.91	□□□□□ -1.62
KTN1-222	ENST00000555506	FOLR3	P41439	243 aa		4.91	□□□□□ -1.62
KTN1-222	ENST00000555506	PDE1A	P54750	535 aa		4.91	□□□□□ -1.62
KTN1-222	ENST00000555506	FAM3B	P58499	235 aa	Predicted RBP	4.91	□□□□□ -1.62
KTN1-222	ENST00000555506	E2F1	Q01094	437 aa		4.91	□□□□□ -1.62
KTN1-222	ENST00000555506	DEUP1	Q05D60	604 aa		4.91	□□□□□ -1.62
KTN1-222	ENST00000555506	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	4.91	□□□□□ -1.62
KTN1-222	ENST00000555506	DNASE1L3	Q13609	305 aa		4.91	□□□□□ -1.62
KTN1-222	ENST00000555506	TXNRD1	Q16881	649 aa		4.91	□□□□□ -1.62
KTN1-222	ENST00000555506	ZNF484	Q5JVG2	852 aa		4.91	□□□□□ -1.62
KTN1-222	ENST00000555506	ATG16L1	Q676U5	607 aa		4.91	□□□□□ -1.62
KTN1-222	ENST00000555506	KIAA0895L	Q68EN5	471 aa		4.91	□□□□□ -1.62
KTN1-222	ENST00000555506	C1orf122	Q6ZSJ8	110 aa		4.91	□□□□□ -1.62
KTN1-222	ENST00000555506	PTCHD4	Q6ZW05	846 aa		4.91	□□□□□ -1.62
KTN1-222	ENST00000555506	TSPYL6	Q8N831	410 aa		4.91	□□□□□ -1.62
KTN1-222	ENST00000555506	RP9	Q8TA86	221 aa	Known RBP	4.91	□□□□□ -1.62
KTN1-222	ENST00000555506	SLC2A12	Q8TD20	617 aa		4.91	□□□□□ -1.62
KTN1-222	ENST00000555506	HVCN1	Q96D96	273 aa		4.91	□□□□□ -1.62
KTN1-222	ENST00000555506	GPR63	Q9BZJ6	419 aa		4.91	□□□□□ -1.62
KTN1-222	ENST00000555506	CCNL1	Q9UK58	526 aa	Predicted RBP	4.91	□□□□□ -1.62
KTN1-222	ENST00000555506	COL4A3	Q01955	1670 aa		4.91	□□□□□ -1.62
KTN1-222	ENST00000555506	CCDC187	A0A096LP49	1063 aa		4.9	□□□□□ -1.62
KTN1-222	ENST00000555506	VWA3A	A6NCI4	1184 aa		4.9	□□□□□ -1.62
KTN1-222	ENST00000555506	SAC3D1	A6NKF1	404 aa		4.9	□□□□□ -1.62
KTN1-222	ENST00000555506	AP4M1	O00189	453 aa		4.9	□□□□□ -1.62
KTN1-222	ENST00000555506	TMPRSS11D	O60235	418 aa		4.9	□□□□□ -1.62
KTN1-222	ENST00000555506	HEXIM1	O94992	359 aa	Known RBP	4.9	□□□□□ -1.62
KTN1-222	ENST00000555506	TJP3	O95049	919 aa		4.9	□□□□□ -1.62
KTN1-222	ENST00000555506	ATP1A3	P13637	1013 aa		4.9	□□□□□ -1.62
KTN1-222	ENST00000555506	ZNF37A	P17032	561 aa	Predicted RBP	4.9	□□□□□ -1.62
KTN1-222	ENST00000555506	PROZ	P22891	400 aa		4.9	□□□□□ -1.62
KTN1-222	ENST00000555506	BDNF	P23560	247 aa		4.9	□□□□□ -1.62
KTN1-222	ENST00000555506	CTGF	P29279	349 aa		4.9	□□□□□ -1.62
KTN1-222	ENST00000555506	NR1H2	P55055	460 aa		4.9	□□□□□ -1.62
KTN1-222	ENST00000555506	BLOC1S1	P78537	153 aa		4.9	□□□□□ -1.62
KTN1-222	ENST00000555506	COL10A1	Q03692	680 aa		4.9	□□□□□ -1.62
KTN1-222	ENST00000555506	RNASEL	Q05823	741 aa	Known RBP	4.9	□□□□□ -1.62
KTN1-222	ENST00000555506	CBFB	Q13951	182 aa		4.9	□□□□□ -1.62
KTN1-222	ENST00000555506	PLAC9	Q5JTB6	97 aa		4.9	□□□□□ -1.62
KTN1-222	ENST00000555506	FAM180B	Q6P0A1	224 aa		4.9	□□□□□ -1.62
KTN1-222	ENST00000555506	ACSM6	Q6P461	480 aa		4.9	□□□□□ -1.62
KTN1-222	ENST00000555506	MTHFD1L	Q6UB35	978 aa		4.9	□□□□□ -1.62
KTN1-222	ENST00000555506		Q6YL49	198 aa		4.9	□□□□□ -1.62
KTN1-222	ENST00000555506	PARS2	Q7L3T8	475 aa	Known RBP	4.9	□□□□□ -1.62
KTN1-222	ENST00000555506	PNPLA1	Q8N8W4	532 aa		4.9	□□□□□ -1.62
KTN1-222	ENST00000555506	FSIP1	Q8NA03	581 aa		4.9	□□□□□ -1.62
KTN1-222	ENST00000555506	HDAC2	Q92769	488 aa	Known RBP	4.9	□□□□□ -1.62
KTN1-222	ENST00000555506	PLEKHA2	Q9HB19	425 aa		4.9	□□□□□ -1.62
KTN1-222	ENST00000555506	MGAT4C	Q9UBM8	478 aa		4.9	□□□□□ -1.62
KTN1-222	ENST00000555506	SWAP70	Q9UH65	585 aa		4.9	□□□□□ -1.62
KTN1-222	ENST00000555506	AMFR	Q9UKV5	643 aa		4.9	□□□□□ -1.62
KTN1-222	ENST00000555506	TRPC5	Q9UL62	973 aa	Predicted RBP	4.9	□□□□□ -1.62
KTN1-222	ENST00000555506	ASAP1	Q9ULH1	1129 aa		4.9	□□□□□ -1.62
KTN1-222	ENST00000555506	PCDHB2	Q9Y5E7	798 aa		4.9	□□□□□ -1.62
KTN1-222	ENST00000555506	ITIH6	Q6UXX5	1313 aa		4.9	□□□□□ -1.63
KTN1-222	ENST00000555506	LMTK3	Q96Q04	1460 aa		4.89	□□□□□ -1.63
KTN1-222	ENST00000555506	TBC1D3D	A0A087WVF3	549 aa		4.89	□□□□□ -1.63
KTN1-222	ENST00000555506	TBC1D3I	A0A087WXS9	549 aa		4.89	□□□□□ -1.63
KTN1-222	ENST00000555506	TBC1D3E	A0A087X179	549 aa		4.89	□□□□□ -1.63
KTN1-222	ENST00000555506	TBC1D3K	A0A087X1G2	549 aa		4.89	□□□□□ -1.63
KTN1-222	ENST00000555506	TBC1D3B	A6NDS4	549 aa		4.89	□□□□□ -1.63
KTN1-222	ENST00000555506	TBC1D3F	A6NER0	549 aa	Predicted RBP	4.89	□□□□□ -1.63
KTN1-222	ENST00000555506		B4E171	279 aa		4.89	□□□□□ -1.63
KTN1-222	ENST00000555506	TBC1D3L	B9A6J9	549 aa		4.89	□□□□□ -1.63
KTN1-222	ENST00000555506	CES2	O00748	559 aa		4.89	□□□□□ -1.63
KTN1-222	ENST00000555506	HNRNPR	O43390	633 aa	Known RBP	4.89	□□□□□ -1.63
KTN1-222	ENST00000555506	CYP3A4	P08684	503 aa		4.89	□□□□□ -1.63
KTN1-222	ENST00000555506	TBC1D3H	P0C7X1	549 aa		4.89	□□□□□ -1.63
KTN1-222	ENST00000555506	TMIGD3	P0DMS9	266 aa	Predicted RBP	4.89	□□□□□ -1.63
KTN1-222	ENST00000555506	NR2F6	P10588	404 aa		4.89	□□□□□ -1.63
KTN1-222	ENST00000555506	PCSK6	P29122	969 aa		4.89	□□□□□ -1.63
KTN1-222	ENST00000555506	IGHMBP2	P38935	993 aa	Known RBP	4.89	□□□□□ -1.63
KTN1-222	ENST00000555506	TSPAN7	P41732	249 aa		4.89	□□□□□ -1.63
KTN1-222	ENST00000555506	RPL15	P61313	204 aa	Known RBP	4.89	□□□□□ -1.63
KTN1-222	ENST00000555506	TLE3	Q04726	772 aa		4.89	□□□□□ -1.63
KTN1-222	ENST00000555506	FAM187B	Q17R55	369 aa		4.89	□□□□□ -1.63
KTN1-222	ENST00000555506	DENND2C	Q68D51	928 aa		4.89	□□□□□ -1.63
KTN1-222	ENST00000555506	TBC1D3G	Q6DHY5	549 aa		4.89	□□□□□ -1.63
KTN1-222	ENST00000555506	TBC1D3C	Q6IPX1	549 aa		4.89	□□□□□ -1.63
KTN1-222	ENST00000555506	C16orf89	Q6UX73	402 aa		4.89	□□□□□ -1.63
KTN1-222	ENST00000555506		Q6ZWC4	215 aa		4.89	□□□□□ -1.63

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