RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 HOXB8P17481 243 aaPredicted RBP18.06■□□□□ 0.48
SHOX-204ENST00000554971 CDH5P33151 784 aaPredicted RBP18.06■□□□□ 0.48
SHOX-204ENST00000554971 PTPN7P35236 360 aa18.06■□□□□ 0.48
SHOX-204ENST00000554971 TUFMP49411 452 aaKnown RBP18.06■□□□□ 0.48
SHOX-204ENST00000554971 TFF2Q03403 129 aa18.06■□□□□ 0.48
SHOX-204ENST00000554971 PKDCCQ504Y2 493 aa18.06■□□□□ 0.48
SHOX-204ENST00000554971 GKAP1Q5VSY0 366 aaPredicted RBP18.06■□□□□ 0.48
SHOX-204ENST00000554971 RTL10Q7L3V2 364 aa18.06■□□□□ 0.48
SHOX-204ENST00000554971 TMEM35BQ8NCS4 154 aa18.06■□□□□ 0.48
SHOX-204ENST00000554971 CMASQ8NFW8 434 aaPredicted RBP18.06■□□□□ 0.48
SHOX-204ENST00000554971 IPO4Q8TEX9 1081 aaKnown RBP18.06■□□□□ 0.48
SHOX-204ENST00000554971 CHMP6Q96FZ7 201 aa18.06■□□□□ 0.48
SHOX-204ENST00000554971 SMARCD1Q96GM5 515 aa18.06■□□□□ 0.48
SHOX-204ENST00000554971 C11orf70Q9BRQ4 267 aa18.06■□□□□ 0.48
SHOX-204ENST00000554971 MED10Q9BTT4 135 aa18.06■□□□□ 0.48
SHOX-204ENST00000554971 PRKD2Q9BZL6 878 aa18.06■□□□□ 0.48
SHOX-204ENST00000554971 HCFC1R1Q9NWW0 138 aa18.06■□□□□ 0.48
SHOX-204ENST00000554971 PCDHGC3Q9UN70 934 aa18.06■□□□□ 0.48
SHOX-204ENST00000554971 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.06■□□□□ 0.48
SHOX-204ENST00000554971 NEU2Q9Y3R4 380 aa18.06■□□□□ 0.48
SHOX-204ENST00000554971 AP1G2O75843 785 aa18.05■□□□□ 0.48
SHOX-204ENST00000554971 TTC31Q49AM3 519 aaPredicted RBP18.05■□□□□ 0.48
SHOX-204ENST00000554971 RABEP2Q9H5N1 569 aa18.05■□□□□ 0.48
SHOX-204ENST00000554971 KIAA1257Q9ULG3 409 aa18.05■□□□□ 0.48
SHOX-204ENST00000554971 FAM170AA1A519 330 aa18.04■□□□□ 0.48
SHOX-204ENST00000554971 TMEM191CA6NGB0 347 aa18.04■□□□□ 0.48
SHOX-204ENST00000554971 TP73O15350 636 aa18.04■□□□□ 0.48
SHOX-204ENST00000554971 TTC4O95801 387 aa18.04■□□□□ 0.48
SHOX-204ENST00000554971 HNRNPA1P09651 372 aaKnown RBP eCLIP18.04■□□□□ 0.48
SHOX-204ENST00000554971 SRGAP2BP0DMP2 458 aa18.04■□□□□ 0.48
SHOX-204ENST00000554971 GRIK1P39086 918 aa18.04■□□□□ 0.48
SHOX-204ENST00000554971 AUHQ13825 339 aaKnown RBP18.04■□□□□ 0.48
SHOX-204ENST00000554971 LCLAT1Q6UWP7 414 aa18.04■□□□□ 0.48
SHOX-204ENST00000554971 MMS22LQ6ZRQ5 1243 aa18.04■□□□□ 0.48
SHOX-204ENST00000554971 SCN4BQ8IWT1 228 aa18.04■□□□□ 0.48
SHOX-204ENST00000554971 GIPC2Q8TF65 315 aa18.04■□□□□ 0.48
SHOX-204ENST00000554971 DUSP16Q9BY84 665 aa18.04■□□□□ 0.48
SHOX-204ENST00000554971 ACTR5Q9H9F9 607 aaPredicted RBP18.04■□□□□ 0.48
SHOX-204ENST00000554971 DDX56Q9NY93 547 aaKnown RBP18.04■□□□□ 0.48
SHOX-204ENST00000554971 ANAPC5Q9UJX4 755 aa18.04■□□□□ 0.48
SHOX-204ENST00000554971 TLDC2A0PJX2 215 aa18.04■□□□□ 0.48
SHOX-204ENST00000554971 HHLA1C9JL84 531 aa18.04■□□□□ 0.48
SHOX-204ENST00000554971 TJP3O95049 919 aa18.04■□□□□ 0.48
SHOX-204ENST00000554971 LRG1P02750 347 aa18.04■□□□□ 0.48
SHOX-204ENST00000554971 FAM200BP0CF97 657 aa18.04■□□□□ 0.48
SHOX-204ENST00000554971 RALAP11233 206 aa18.04■□□□□ 0.48
SHOX-204ENST00000554971 HMGA1P17096 107 aaKnown RBP18.04■□□□□ 0.48
SHOX-204ENST00000554971 NPR3P17342 541 aa18.04■□□□□ 0.48
SHOX-204ENST00000554971 ADCY8P40145 1251 aa18.04■□□□□ 0.48
SHOX-204ENST00000554971 ALDH1A3P47895 512 aa18.04■□□□□ 0.48
SHOX-204ENST00000554971 MAP3K7CLP57077 242 aa18.04■□□□□ 0.48
SHOX-204ENST00000554971 PIGHQ14442 188 aaPredicted RBP18.04■□□□□ 0.48
SHOX-204ENST00000554971 CNGA2Q16280 664 aa18.04■□□□□ 0.48
SHOX-204ENST00000554971 GOLGA7BQ2TAP0 167 aa18.04■□□□□ 0.48
SHOX-204ENST00000554971 GPRIN1Q7Z2K8 1008 aa18.04■□□□□ 0.48
SHOX-204ENST00000554971 CPLX4Q7Z7G2 160 aa18.04■□□□□ 0.48
SHOX-204ENST00000554971 GPR149Q86SP6 731 aa18.04■□□□□ 0.48
SHOX-204ENST00000554971 CCDC50Q8IVM0 306 aa18.04■□□□□ 0.48
SHOX-204ENST00000554971 CACNA2D3Q8IZS8 1091 aa18.04■□□□□ 0.48
SHOX-204ENST00000554971 NIPA2Q8N8Q9 360 aa18.04■□□□□ 0.48
SHOX-204ENST00000554971 ANKRD52Q8NB46 1076 aa18.04■□□□□ 0.48
SHOX-204ENST00000554971 LRRC3Q9BY71 257 aa18.04■□□□□ 0.48
SHOX-204ENST00000554971 TRIM7Q9C029 511 aa18.04■□□□□ 0.48
SHOX-204ENST00000554971 ADAM7Q9H2U9 754 aa18.04■□□□□ 0.48
SHOX-204ENST00000554971 CDC42EP4Q9H3Q1 356 aaKnown RBP18.04■□□□□ 0.48
SHOX-204ENST00000554971 STRIP2Q9ULQ0 834 aa18.04■□□□□ 0.48
SHOX-204ENST00000554971 DRG1Q9Y295 367 aaKnown RBP18.04■□□□□ 0.48
SHOX-204ENST00000554971 CEP83Q9Y592 693 aa18.04■□□□□ 0.48
SHOX-204ENST00000554971 TNFRSF10BO14763 440 aa18.03■□□□□ 0.48
SHOX-204ENST00000554971 MICAL2O94851 1124 aa18.03■□□□□ 0.48
SHOX-204ENST00000554971 USP46P62068 366 aa18.03■□□□□ 0.48
SHOX-204ENST00000554971 UBA3Q8TBC4 463 aa18.03■□□□□ 0.48
SHOX-204ENST00000554971 PSMG2Q969U7 264 aa18.03■□□□□ 0.48
SHOX-204ENST00000554971 C8orf48Q96LL4 319 aa18.03■□□□□ 0.48
SHOX-204ENST00000554971 CCDC77Q9BR77 488 aa18.03■□□□□ 0.48
SHOX-204ENST00000554971 DMAP1Q9NPF5 467 aaPredicted RBP18.03■□□□□ 0.48
SHOX-204ENST00000554971 DNMT3BQ9UBC3 853 aaKnown RBP18.03■□□□□ 0.48
SHOX-204ENST00000554971 EFR3BQ9Y2G0 817 aa18.03■□□□□ 0.48
SHOX-204ENST00000554971 TCF20Q9UGU0 1960 aaKnown RBP18.02■□□□□ 0.48
SHOX-204ENST00000554971 GRXCR2A6NFK2 248 aa18.02■□□□□ 0.48
SHOX-204ENST00000554971 POU2F2P09086 479 aa18.02■□□□□ 0.48
SHOX-204ENST00000554971 CHN1P15882 459 aa18.02■□□□□ 0.48
SHOX-204ENST00000554971 DRD4P21917 467 aa18.02■□□□□ 0.48
SHOX-204ENST00000554971 ITGA8P53708 1063 aa18.02■□□□□ 0.48
SHOX-204ENST00000554971 NTHL1P78549 312 aa18.02■□□□□ 0.48
SHOX-204ENST00000554971 PDE4CQ08493 712 aa18.02■□□□□ 0.48
SHOX-204ENST00000554971 SNX1Q13596 522 aa18.02■□□□□ 0.48
SHOX-204ENST00000554971 DNAJB7Q7Z6W7 309 aaPredicted RBP18.02■□□□□ 0.48
SHOX-204ENST00000554971 TMC8Q8IU68 726 aa18.02■□□□□ 0.48
SHOX-204ENST00000554971 SUSD6Q92537 303 aa18.02■□□□□ 0.48
SHOX-204ENST00000554971 SMG7Q92540 1137 aaKnown RBP18.02■□□□□ 0.48
SHOX-204ENST00000554971 SEC16BQ96JE7 1060 aa18.02■□□□□ 0.48
SHOX-204ENST00000554971 CABS1Q96KC9 395 aa18.02■□□□□ 0.48
SHOX-204ENST00000554971 SPATA17Q96L03 361 aa18.02■□□□□ 0.48
SHOX-204ENST00000554971 FRMD8P1Q9BZ68 369 aaPredicted RBP18.02■□□□□ 0.48
SHOX-204ENST00000554971 CYTH4Q9UIA0 394 aa18.02■□□□□ 0.48
SHOX-204ENST00000554971 CD207Q9UJ71 328 aa18.02■□□□□ 0.48
SHOX-204ENST00000554971 TCRBV5S1A1TA0A578 114 aa18.02■□□□□ 0.47
SHOX-204ENST00000554971 CCR2P41597 374 aa18.02■□□□□ 0.47
SHOX-204ENST00000554971 TAS2R40P59535 323 aa18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms