RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 HARS2P49590 506 aaKnown RBP12.85□□□□□ -0.35
SYNE2-214ENST00000554928 CENPCQ03188 943 aa12.85□□□□□ -0.35
SYNE2-214ENST00000554928 DMWDQ09019 674 aa12.85□□□□□ -0.35
SYNE2-214ENST00000554928 HGSNATQ68CP4 663 aa12.85□□□□□ -0.35
SYNE2-214ENST00000554928 TRIM72Q6ZMU5 477 aa12.85□□□□□ -0.35
SYNE2-214ENST00000554928 MON1BQ7L1V2 547 aa12.85□□□□□ -0.35
SYNE2-214ENST00000554928 WFDC5Q8TCV5 224 aa12.85□□□□□ -0.35
SYNE2-214ENST00000554928 PRICKLE1Q96MT3 831 aaPredicted RBP12.85□□□□□ -0.35
SYNE2-214ENST00000554928 SERPINB11Q96P15 392 aa12.85□□□□□ -0.35
SYNE2-214ENST00000554928 PNKPQ96T60 521 aa12.85□□□□□ -0.35
SYNE2-214ENST00000554928 TBCBQ99426 244 aa12.85□□□□□ -0.35
SYNE2-214ENST00000554928 NPY6RQ99463 290 aa12.85□□□□□ -0.35
SYNE2-214ENST00000554928 FAM204AQ9H8W3 233 aa12.85□□□□□ -0.35
SYNE2-214ENST00000554928 ARHGEF4Q9NR80 690 aa12.85□□□□□ -0.35
SYNE2-214ENST00000554928 TMPRSS4Q9NRS4 437 aa12.85□□□□□ -0.35
SYNE2-214ENST00000554928 DDIT4Q9NX09 232 aa12.85□□□□□ -0.35
SYNE2-214ENST00000554928 STOML2Q9UJZ1 356 aa12.85□□□□□ -0.35
SYNE2-214ENST00000554928 TLR6Q9Y2C9 796 aa12.85□□□□□ -0.35
SYNE2-214ENST00000554928 SNX10Q9Y5X0 201 aa12.85□□□□□ -0.35
SYNE2-214ENST00000554928 A0A1W2PQJ5 194 aa12.84□□□□□ -0.35
SYNE2-214ENST00000554928 TCRBV5S1A1TA0A578 114 aa12.84□□□□□ -0.35
SYNE2-214ENST00000554928 NCAM2O15394 837 aa12.84□□□□□ -0.35
SYNE2-214ENST00000554928 CACNG3O60359 315 aa12.84□□□□□ -0.35
SYNE2-214ENST00000554928 ACSL4O60488 711 aa12.84□□□□□ -0.35
SYNE2-214ENST00000554928 KAT7O95251 611 aa12.84□□□□□ -0.35
SYNE2-214ENST00000554928 TDGF1P13385 188 aa12.84□□□□□ -0.35
SYNE2-214ENST00000554928 DRD1P21728 446 aa12.84□□□□□ -0.35
SYNE2-214ENST00000554928 CASP14P31944 242 aa12.84□□□□□ -0.35
SYNE2-214ENST00000554928 PRKCIP41743 596 aa12.84□□□□□ -0.35
SYNE2-214ENST00000554928 MATKP42679 507 aa12.84□□□□□ -0.35
SYNE2-214ENST00000554928 CDK17Q00537 523 aa12.84□□□□□ -0.35
SYNE2-214ENST00000554928 RING1Q06587 406 aa12.84□□□□□ -0.35
SYNE2-214ENST00000554928 NME3Q13232 169 aa12.84□□□□□ -0.35
SYNE2-214ENST00000554928 LRRC32Q14392 662 aa12.84□□□□□ -0.35
SYNE2-214ENST00000554928 DGKKQ5KSL6 1271 aa12.84□□□□□ -0.35
SYNE2-214ENST00000554928 SH3PXD2AQ5TCZ1 1133 aa12.84□□□□□ -0.35
SYNE2-214ENST00000554928 C1orf228Q6PIY5 440 aa12.84□□□□□ -0.35
SYNE2-214ENST00000554928 PHF13Q86YI8 300 aaPredicted RBP12.84□□□□□ -0.35
SYNE2-214ENST00000554928 CPXM2Q8N436 756 aa12.84□□□□□ -0.35
SYNE2-214ENST00000554928 CFAP57Q96MR6 1250 aa12.84□□□□□ -0.35
SYNE2-214ENST00000554928 EDEM3Q9BZQ6 932 aa12.84□□□□□ -0.35
SYNE2-214ENST00000554928 PRMT8Q9NR22 394 aaPredicted RBP12.84□□□□□ -0.35
SYNE2-214ENST00000554928 PIGVQ9NUD9 493 aa12.84□□□□□ -0.35
SYNE2-214ENST00000554928 DNAJC17Q9NVM6 304 aaKnown RBP12.84□□□□□ -0.35
SYNE2-214ENST00000554928 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.84□□□□□ -0.35
SYNE2-214ENST00000554928 ADAM22Q9P0K1 906 aa12.84□□□□□ -0.35
SYNE2-214ENST00000554928 CAPN11Q9UMQ6 739 aa12.84□□□□□ -0.35
SYNE2-214ENST00000554928 ZNF510Q9Y2H8 683 aa12.84□□□□□ -0.35
SYNE2-214ENST00000554928 ITIH6Q6UXX5 1313 aa12.84□□□□□ -0.35
SYNE2-214ENST00000554928 CACNA1IQ9P0X4 2223 aa12.84□□□□□ -0.35
SYNE2-214ENST00000554928 KCNU1A8MYU2 1149 aa12.83□□□□□ -0.36
SYNE2-214ENST00000554928 PRRT4C9JH25 899 aa12.83□□□□□ -0.36
SYNE2-214ENST00000554928 M0QYT0 321 aa12.83□□□□□ -0.36
SYNE2-214ENST00000554928 ADCY5O95622 1261 aa12.83□□□□□ -0.36
SYNE2-214ENST00000554928 SP9P0CG40 484 aa12.83□□□□□ -0.36
SYNE2-214ENST00000554928 HNRNPLP14866 589 aaKnown RBP eCLIP12.83□□□□□ -0.36
SYNE2-214ENST00000554928 TNFAIP3P21580 790 aa12.83□□□□□ -0.36
SYNE2-214ENST00000554928 HOXD9P28356 352 aaPredicted RBP12.83□□□□□ -0.36
SYNE2-214ENST00000554928 NOS2P35228 1153 aa12.83□□□□□ -0.36
SYNE2-214ENST00000554928 SCNN1AP37088 669 aa12.83□□□□□ -0.36
SYNE2-214ENST00000554928 NSFP46459 744 aaKnown RBP12.83□□□□□ -0.36
SYNE2-214ENST00000554928 SULT1E1P49888 294 aa12.83□□□□□ -0.36
SYNE2-214ENST00000554928 IRAK1P51617 712 aa12.83□□□□□ -0.36
SYNE2-214ENST00000554928 ZBED6P86452 979 aa12.83□□□□□ -0.36
SYNE2-214ENST00000554928 AMPD2Q01433 879 aa12.83□□□□□ -0.36
SYNE2-214ENST00000554928 CSTF1Q05048 431 aaKnown RBP12.83□□□□□ -0.36
SYNE2-214ENST00000554928 KLHL30Q0D2K2 578 aa12.83□□□□□ -0.36
SYNE2-214ENST00000554928 NNTQ13423 1086 aa12.83□□□□□ -0.36
SYNE2-214ENST00000554928 C15orf59Q2T9L4 293 aaPredicted RBP12.83□□□□□ -0.36
SYNE2-214ENST00000554928 C2orf27AQ580R0 203 aa12.83□□□□□ -0.36
SYNE2-214ENST00000554928 ADGRF1Q5T601 910 aa12.83□□□□□ -0.36
SYNE2-214ENST00000554928 PIK3R6Q5UE93 754 aa12.83□□□□□ -0.36
SYNE2-214ENST00000554928 RAP1GAP2Q684P5 730 aa12.83□□□□□ -0.36
SYNE2-214ENST00000554928 NUGGCQ68CJ6 796 aa12.83□□□□□ -0.36
SYNE2-214ENST00000554928 GRAMD4Q6IC98 578 aa12.83□□□□□ -0.36
SYNE2-214ENST00000554928 ACAD10Q6JQN1 1059 aa12.83□□□□□ -0.36
SYNE2-214ENST00000554928 ZDHHC17Q8IUH5 632 aa12.83□□□□□ -0.36
SYNE2-214ENST00000554928 VSTM4Q8IW00 320 aa12.83□□□□□ -0.36
SYNE2-214ENST00000554928 MCOLN2Q8IZK6 566 aa12.83□□□□□ -0.36
SYNE2-214ENST00000554928 CCDC33Q8N5R6 958 aa12.83□□□□□ -0.36
SYNE2-214ENST00000554928 TERB1Q8NA31 727 aa12.83□□□□□ -0.36
SYNE2-214ENST00000554928 RPLP0P6Q8NHW5 317 aa12.83□□□□□ -0.36
SYNE2-214ENST00000554928 USP33Q8TEY7 942 aa12.83□□□□□ -0.36
SYNE2-214ENST00000554928 NT5C3BQ969T7 300 aa12.83□□□□□ -0.36
SYNE2-214ENST00000554928 NUP58Q9BVL2 599 aa12.83□□□□□ -0.36
SYNE2-214ENST00000554928 WDR35Q9P2L0 1181 aa12.83□□□□□ -0.36
SYNE2-214ENST00000554928 DEC1Q9P2X7 70 aa12.83□□□□□ -0.36
SYNE2-214ENST00000554928 FBXO10Q9UK96 956 aa12.83□□□□□ -0.36
SYNE2-214ENST00000554928 A0A0A0MRY4 1105 aa12.82□□□□□ -0.36
SYNE2-214ENST00000554928 K7ESF4 209 aa12.82□□□□□ -0.36
SYNE2-214ENST00000554928 LAMTOR5O43504 91 aa12.82□□□□□ -0.36
SYNE2-214ENST00000554928 LATS1O95835 1130 aa12.82□□□□□ -0.36
SYNE2-214ENST00000554928 APODP05090 189 aa12.82□□□□□ -0.36
SYNE2-214ENST00000554928 RRM1P23921 792 aa12.82□□□□□ -0.36
SYNE2-214ENST00000554928 CHKAP35790 457 aa12.82□□□□□ -0.36
SYNE2-214ENST00000554928 EIF2DP41214 584 aaKnown RBP12.82□□□□□ -0.36
SYNE2-214ENST00000554928 GRIA2P42262 883 aa12.82□□□□□ -0.36
SYNE2-214ENST00000554928 MAGEA9P43362 315 aa12.82□□□□□ -0.36
SYNE2-214ENST00000554928 KIR2DL1P43626 348 aaPredicted RBP12.82□□□□□ -0.36
SYNE2-214ENST00000554928 PXNP49023 591 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms