RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 ADIGQ0VDE8 80 aa12.23□□□□□ -0.45
XRCC3-208ENST00000554811 ZNF618Q5T7W0 954 aa12.23□□□□□ -0.45
XRCC3-208ENST00000554811 DRICH1Q6PGQ1 229 aaPredicted RBP12.23□□□□□ -0.45
XRCC3-208ENST00000554811 APOBEC3FQ8IUX4 373 aaKnown RBP12.23□□□□□ -0.45
XRCC3-208ENST00000554811 PAF1Q8N7H5 531 aa12.23□□□□□ -0.45
XRCC3-208ENST00000554811 SNX31Q8N9S9 440 aa12.23□□□□□ -0.45
XRCC3-208ENST00000554811 DNERQ8NFT8 737 aa12.23□□□□□ -0.45
XRCC3-208ENST00000554811 OR52K1Q8NGK4 314 aa12.23□□□□□ -0.45
XRCC3-208ENST00000554811 FGD4Q96M96 766 aa12.23□□□□□ -0.45
XRCC3-208ENST00000554811 NIFKQ9BYG3 293 aaKnown RBP12.23□□□□□ -0.45
XRCC3-208ENST00000554811 TEX264Q9Y6I9 313 aa12.23□□□□□ -0.45
XRCC3-208ENST00000554811 SLC15A5A6NIM6 579 aa12.22□□□□□ -0.45
XRCC3-208ENST00000554811 C2CD4BA6NLJ0 364 aa12.22□□□□□ -0.45
XRCC3-208ENST00000554811 HBP1O60381 514 aa12.22□□□□□ -0.45
XRCC3-208ENST00000554811 SLC4A1P02730 911 aa12.22□□□□□ -0.45
XRCC3-208ENST00000554811 ATP6V1B1P15313 513 aa12.22□□□□□ -0.45
XRCC3-208ENST00000554811 CYP3A5P20815 502 aa12.22□□□□□ -0.45
XRCC3-208ENST00000554811 LMO2P25791 158 aa12.22□□□□□ -0.45
XRCC3-208ENST00000554811 PRKD1Q15139 912 aaPredicted RBP12.22□□□□□ -0.45
XRCC3-208ENST00000554811 PDCD2Q16342 344 aaPredicted RBP12.22□□□□□ -0.45
XRCC3-208ENST00000554811 TFB1MQ8WVM0 346 aaKnown RBP12.22□□□□□ -0.45
XRCC3-208ENST00000554811 TBCBQ99426 244 aa12.22□□□□□ -0.45
XRCC3-208ENST00000554811 SAR1AQ9NR31 198 aa12.22□□□□□ -0.45
XRCC3-208ENST00000554811 SNX10Q9Y5X0 201 aa12.22□□□□□ -0.45
XRCC3-208ENST00000554811 PHGDHO43175 533 aaKnown RBP12.22□□□□□ -0.45
XRCC3-208ENST00000554811 PKNOX1P55347 436 aa12.22□□□□□ -0.45
XRCC3-208ENST00000554811 CLDN10P78369 228 aa12.22□□□□□ -0.45
XRCC3-208ENST00000554811 MRPS35P82673 323 aaKnown RBP12.22□□□□□ -0.45
XRCC3-208ENST00000554811 SLC30A9Q6PML9 568 aa12.22□□□□□ -0.45
XRCC3-208ENST00000554811 LAYNQ6UX15 382 aa12.22□□□□□ -0.45
XRCC3-208ENST00000554811 CAND1Q86VP6 1230 aaKnown RBP12.22□□□□□ -0.45
XRCC3-208ENST00000554811 TTC30AQ86WT1 665 aa12.22□□□□□ -0.45
XRCC3-208ENST00000554811 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.22□□□□□ -0.45
XRCC3-208ENST00000554811 DEFB106AQ8N104 65 aa12.22□□□□□ -0.45
XRCC3-208ENST00000554811 ZNF513Q8N8E2 541 aaPredicted RBP12.22□□□□□ -0.45
XRCC3-208ENST00000554811 CMASQ8NFW8 434 aaPredicted RBP12.22□□□□□ -0.45
XRCC3-208ENST00000554811 SH3TC2Q8TF17 1288 aa12.22□□□□□ -0.45
XRCC3-208ENST00000554811 TMA16Q96EY4 203 aaKnown RBP12.22□□□□□ -0.45
XRCC3-208ENST00000554811 TAGLN3Q9UI15 199 aa12.22□□□□□ -0.45
XRCC3-208ENST00000554811 PPM1HQ9ULR3 514 aa12.22□□□□□ -0.45
XRCC3-208ENST00000554811 PCDHGC3Q9UN70 934 aa12.22□□□□□ -0.45
XRCC3-208ENST00000554811 SLC4A7Q9Y6M7 1214 aa12.22□□□□□ -0.45
XRCC3-208ENST00000554811 ATAD5Q96QE3 1844 aa12.22□□□□□ -0.45
XRCC3-208ENST00000554811 MAP3K13O43283 966 aa12.22□□□□□ -0.45
XRCC3-208ENST00000554811 IL18RAPO95256 599 aa12.22□□□□□ -0.45
XRCC3-208ENST00000554811 ARL1P40616 181 aaPredicted RBP12.22□□□□□ -0.45
XRCC3-208ENST00000554811 MBTD1Q05BQ5 628 aa12.22□□□□□ -0.45
XRCC3-208ENST00000554811 PPP1R15BQ5SWA1 713 aa12.22□□□□□ -0.45
XRCC3-208ENST00000554811 CELF3Q5SZQ8 465 aaKnown RBP12.22□□□□□ -0.45
XRCC3-208ENST00000554811 AP1ARQ63HQ0 302 aa12.22□□□□□ -0.45
XRCC3-208ENST00000554811 NRG4Q8WWG1 115 aa12.22□□□□□ -0.45
XRCC3-208ENST00000554811 TUBB6Q9BUF5 446 aa12.22□□□□□ -0.45
XRCC3-208ENST00000554811 WDR55Q9H6Y2 383 aaPredicted RBP12.22□□□□□ -0.45
XRCC3-208ENST00000554811 POPDC2Q9HBU9 364 aa12.22□□□□□ -0.45
XRCC3-208ENST00000554811 XPNPEP3Q9NQH7 507 aa12.22□□□□□ -0.45
XRCC3-208ENST00000554811 NUDT5Q9UKK9 219 aa12.22□□□□□ -0.45
XRCC3-208ENST00000554811 COL11A2P13942 1736 aaPredicted RBP12.21□□□□□ -0.45
XRCC3-208ENST00000554811 MOCS2O96007 188 aaPredicted RBP12.21□□□□□ -0.45
XRCC3-208ENST00000554811 LINGO3P0C6S8 592 aa12.21□□□□□ -0.45
XRCC3-208ENST00000554811 GNL1P36915 607 aaPredicted RBP12.21□□□□□ -0.45
XRCC3-208ENST00000554811 CCR10P46092 362 aa12.21□□□□□ -0.45
XRCC3-208ENST00000554811 NUDT2P50583 147 aa12.21□□□□□ -0.45
XRCC3-208ENST00000554811 SLC6A3Q01959 620 aa12.21□□□□□ -0.45
XRCC3-208ENST00000554811 ITKQ08881 620 aa12.21□□□□□ -0.45
XRCC3-208ENST00000554811 STRA8Q7Z7C7 330 aa12.21□□□□□ -0.45
XRCC3-208ENST00000554811 PNPLA1Q8N8W4 532 aa12.21□□□□□ -0.45
XRCC3-208ENST00000554811 OXCT2Q9BYC2 517 aaPredicted RBP12.21□□□□□ -0.45
XRCC3-208ENST00000554811 NXF3Q9H4D5 531 aaKnown RBP12.21□□□□□ -0.45
XRCC3-208ENST00000554811 SYBUQ9NX95 663 aa12.21□□□□□ -0.45
XRCC3-208ENST00000554811 MAGEB2O15479 319 aa12.21□□□□□ -0.46
XRCC3-208ENST00000554811 NDUFV1P49821 464 aa12.21□□□□□ -0.46
XRCC3-208ENST00000554811 SLC10A2Q12908 348 aaPredicted RBP12.21□□□□□ -0.46
XRCC3-208ENST00000554811 ILDR2Q71H61 639 aa12.21□□□□□ -0.46
XRCC3-208ENST00000554811 HPS6Q86YV9 775 aa12.21□□□□□ -0.46
XRCC3-208ENST00000554811 TMPRSS6Q8IU80 811 aa12.21□□□□□ -0.46
XRCC3-208ENST00000554811 RYBPQ8N488 228 aaPredicted RBP12.21□□□□□ -0.46
XRCC3-208ENST00000554811 PQLC3Q8N755 202 aa12.21□□□□□ -0.46
XRCC3-208ENST00000554811 HTR3CQ8WXA8 447 aa12.21□□□□□ -0.46
XRCC3-208ENST00000554811 LENG1Q96BZ8 264 aaPredicted RBP12.21□□□□□ -0.46
XRCC3-208ENST00000554811 EBNA1BP2Q99848 306 aaKnown RBP12.21□□□□□ -0.46
XRCC3-208ENST00000554811 EIF2AQ9BY44 585 aaKnown RBP12.21□□□□□ -0.46
XRCC3-208ENST00000554811 TASP1Q9H6P5 420 aa12.21□□□□□ -0.46
XRCC3-208ENST00000554811 C20orf96Q9NUD7 363 aaPredicted RBP12.21□□□□□ -0.46
XRCC3-208ENST00000554811 HBS1LQ9Y450 684 aaKnown RBP12.21□□□□□ -0.46
XRCC3-208ENST00000554811 KIF13BQ9NQT8 1826 aa12.21□□□□□ -0.46
XRCC3-208ENST00000554811 MFSD11O43934 449 aa12.21□□□□□ -0.46
XRCC3-208ENST00000554811 B4GALT4O60513 344 aa12.21□□□□□ -0.46
XRCC3-208ENST00000554811 CALRP27797 417 aaKnown RBP12.21□□□□□ -0.46
XRCC3-208ENST00000554811 COPAP53621 1224 aa12.21□□□□□ -0.46
XRCC3-208ENST00000554811 MRPS5P82675 430 aaKnown RBP12.21□□□□□ -0.46
XRCC3-208ENST00000554811 KCNJ11Q14654 390 aa12.21□□□□□ -0.46
XRCC3-208ENST00000554811 SOWAHAQ2M3V2 549 aa12.21□□□□□ -0.46
XRCC3-208ENST00000554811 LBX2Q6XYB7 198 aa12.21□□□□□ -0.46
XRCC3-208ENST00000554811 HASPINQ8TF76 798 aa12.21□□□□□ -0.46
XRCC3-208ENST00000554811 PDZD7Q9H5P4 517 aa12.21□□□□□ -0.46
XRCC3-208ENST00000554811 PAPOLBQ9NRJ5 636 aaKnown RBP12.21□□□□□ -0.46
XRCC3-208ENST00000554811 SLC7A8Q9UHI5 535 aa12.21□□□□□ -0.46
XRCC3-208ENST00000554811 DFFAO00273 331 aa12.2□□□□□ -0.46
XRCC3-208ENST00000554811 CHADO15335 359 aa12.2□□□□□ -0.46
XRCC3-208ENST00000554811 DYNC1LI2O43237 492 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms