RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 NR2F6P10588 404 aa1.78□□□□□ -2.13
PRPF39-208ENST00000554785 HGFP14210 728 aa1.78□□□□□ -2.13
PRPF39-208ENST00000554785 EGR1P18146 543 aa1.78□□□□□ -2.13
PRPF39-208ENST00000554785 EPHA3P29320 983 aa1.78□□□□□ -2.13
PRPF39-208ENST00000554785 PDIA3P30101 505 aaKnown RBP1.78□□□□□ -2.13
PRPF39-208ENST00000554785 UQCRC1P31930 480 aa1.78□□□□□ -2.13
PRPF39-208ENST00000554785 CHKAP35790 457 aa1.78□□□□□ -2.13
PRPF39-208ENST00000554785 HALP42357 657 aa1.78□□□□□ -2.13
PRPF39-208ENST00000554785 PGDP52209 483 aa1.78□□□□□ -2.13
PRPF39-208ENST00000554785 BCAT1P54687 386 aa1.78□□□□□ -2.13
PRPF39-208ENST00000554785 SRSF4Q08170 494 aaKnown RBP1.78□□□□□ -2.13
PRPF39-208ENST00000554785 PFKFB4Q16877 469 aa1.78□□□□□ -2.13
PRPF39-208ENST00000554785 TUBB8Q3ZCM7 444 aa1.78□□□□□ -2.13
PRPF39-208ENST00000554785 ZACNQ401N2 412 aa1.78□□□□□ -2.13
PRPF39-208ENST00000554785 CCDC38Q502W7 563 aa1.78□□□□□ -2.13
PRPF39-208ENST00000554785 EEF1AKMT2Q5JPI9 291 aaKnown RBP1.78□□□□□ -2.13
PRPF39-208ENST00000554785 DEPDC1Q5TB30 811 aa1.78□□□□□ -2.13
PRPF39-208ENST00000554785 MANEALQ5VSG8 457 aa1.78□□□□□ -2.13
PRPF39-208ENST00000554785 ARL6IP4Q66PJ3 421 aaKnown RBP1.78□□□□□ -2.13
PRPF39-208ENST00000554785 RAP1GAP2Q684P5 730 aa1.78□□□□□ -2.13
PRPF39-208ENST00000554785 MRNIPQ6NTE8 343 aa1.78□□□□□ -2.13
PRPF39-208ENST00000554785 ZNF782Q6ZMW2 699 aaPredicted RBP1.78□□□□□ -2.13
PRPF39-208ENST00000554785 CCDC28AQ8IWP9 274 aa1.78□□□□□ -2.13
PRPF39-208ENST00000554785 IZUMO1Q8IYV9 350 aa1.78□□□□□ -2.13
PRPF39-208ENST00000554785 IPO4Q8TEX9 1081 aaKnown RBP1.78□□□□□ -2.13
PRPF39-208ENST00000554785 FKBP10Q96AY3 582 aa1.78□□□□□ -2.13
PRPF39-208ENST00000554785 ZDHHC12Q96GR4 267 aa1.78□□□□□ -2.13
PRPF39-208ENST00000554785 PGBD1Q96JS3 809 aa1.78□□□□□ -2.13
PRPF39-208ENST00000554785 ZBTB45Q96K62 511 aaPredicted RBP1.78□□□□□ -2.13
PRPF39-208ENST00000554785 FAM227BQ96M60 508 aa1.78□□□□□ -2.13
PRPF39-208ENST00000554785 ZNF778Q96MU6 729 aa1.78□□□□□ -2.13
PRPF39-208ENST00000554785 C17orf80Q9BSJ5 609 aa1.78□□□□□ -2.13
PRPF39-208ENST00000554785 ZCWPW1Q9H0M4 648 aa1.78□□□□□ -2.13
PRPF39-208ENST00000554785 SLC25A32Q9H2D1 315 aa1.78□□□□□ -2.13
PRPF39-208ENST00000554785 OBP2BQ9NPH6 170 aa1.78□□□□□ -2.13
PRPF39-208ENST00000554785 IGSF9Q9P2J2 1179 aa1.78□□□□□ -2.13
PRPF39-208ENST00000554785 DNAJB11Q9UBS4 358 aa1.78□□□□□ -2.13
PRPF39-208ENST00000554785 SERGEFQ9UGK8 458 aa1.78□□□□□ -2.13
PRPF39-208ENST00000554785 SNX14Q9Y5W7 946 aa1.78□□□□□ -2.13
PRPF39-208ENST00000554785 DUOX2Q9NRD8 1548 aa1.78□□□□□ -2.13
PRPF39-208ENST00000554785 PLEKHG1Q9ULL1 1385 aa1.77□□□□□ -2.13
PRPF39-208ENST00000554785 CDH23Q9H251 3354 aa1.77□□□□□ -2.13
PRPF39-208ENST00000554785 E9PCH4 1651 aa1.77□□□□□ -2.13
PRPF39-208ENST00000554785 SLIT2O94813 1529 aa1.77□□□□□ -2.13
PRPF39-208ENST00000554785 LMTK2Q8IWU2 1503 aa1.77□□□□□ -2.13
PRPF39-208ENST00000554785 A1L4Q6 167 aa1.77□□□□□ -2.13
PRPF39-208ENST00000554785 WDR91A4D1P6 747 aa1.77□□□□□ -2.13
PRPF39-208ENST00000554785 LGALS16A8MUM7 142 aa1.77□□□□□ -2.13
PRPF39-208ENST00000554785 ZNF213O14771 459 aa1.77□□□□□ -2.13
PRPF39-208ENST00000554785 PIP5K1BO14986 540 aa1.77□□□□□ -2.13
PRPF39-208ENST00000554785 NPC1O15118 1278 aa1.77□□□□□ -2.13
PRPF39-208ENST00000554785 SLC16A3O15427 465 aaKnown RBP1.77□□□□□ -2.13
PRPF39-208ENST00000554785 SNX2O60749 519 aa1.77□□□□□ -2.13
PRPF39-208ENST00000554785 PECAM1P16284 738 aaPredicted RBP1.77□□□□□ -2.13
PRPF39-208ENST00000554785 GPD1P21695 349 aa1.77□□□□□ -2.13
PRPF39-208ENST00000554785 SLC5A2P31639 672 aa1.77□□□□□ -2.13
PRPF39-208ENST00000554785 GATMP50440 423 aa1.77□□□□□ -2.13
PRPF39-208ENST00000554785 EIF2B5Q13144 721 aaKnown RBP1.77□□□□□ -2.13
PRPF39-208ENST00000554785 PTK2BQ14289 1009 aa1.77□□□□□ -2.13
PRPF39-208ENST00000554785 SPARCL1Q14515 664 aa1.77□□□□□ -2.13
PRPF39-208ENST00000554785 TBCCQ15814 346 aa1.77□□□□□ -2.13
PRPF39-208ENST00000554785 LY6KQ17RY6 165 aa1.77□□□□□ -2.13
PRPF39-208ENST00000554785 SLC5A9Q2M3M2 681 aa1.77□□□□□ -2.13
PRPF39-208ENST00000554785 NBPF8Q3BBV2 869 aa1.77□□□□□ -2.13
PRPF39-208ENST00000554785 ARHGAP15Q53QZ3 475 aa1.77□□□□□ -2.13
PRPF39-208ENST00000554785 INO80DQ53TQ3 878 aaPredicted RBP1.77□□□□□ -2.13
PRPF39-208ENST00000554785 TMTC4Q5T4D3 741 aa1.77□□□□□ -2.13
PRPF39-208ENST00000554785 TEDDM1Q5T9Z0 273 aa1.77□□□□□ -2.13
PRPF39-208ENST00000554785 KIAA1614Q5VZ46 1190 aa1.77□□□□□ -2.13
PRPF39-208ENST00000554785 TLDC1Q6P9B6 456 aa1.77□□□□□ -2.13
PRPF39-208ENST00000554785 PTF1AQ7RTS3 328 aa1.77□□□□□ -2.13
PRPF39-208ENST00000554785 MYCT1Q8N699 235 aa1.77□□□□□ -2.13
PRPF39-208ENST00000554785 ANKRD42Q8N9B4 389 aa1.77□□□□□ -2.13
PRPF39-208ENST00000554785 ATG16L2Q8NAA4 619 aa1.77□□□□□ -2.13
PRPF39-208ENST00000554785 CCT6BQ92526 530 aa1.77□□□□□ -2.13
PRPF39-208ENST00000554785 GLG1Q92896 1179 aa1.77□□□□□ -2.13
PRPF39-208ENST00000554785 LTV1Q96GA3 475 aaPredicted RBP1.77□□□□□ -2.13
PRPF39-208ENST00000554785 HIST1H2AAQ96QV6 131 aa1.77□□□□□ -2.13
PRPF39-208ENST00000554785 HAPLN3Q96S86 360 aa1.77□□□□□ -2.13
PRPF39-208ENST00000554785 RMDN3Q96TC7 470 aa1.77□□□□□ -2.13
PRPF39-208ENST00000554785 SYT17Q9BSW7 474 aa1.77□□□□□ -2.13
PRPF39-208ENST00000554785 ALG8Q9BVK2 526 aa1.77□□□□□ -2.13
PRPF39-208ENST00000554785 GLOD4Q9HC38 313 aa1.77□□□□□ -2.13
PRPF39-208ENST00000554785 TMEM8AQ9HCN3 771 aa1.77□□□□□ -2.13
PRPF39-208ENST00000554785 LRFN1Q9P244 771 aa1.77□□□□□ -2.13
PRPF39-208ENST00000554785 STK26Q9P289 416 aa1.77□□□□□ -2.13
PRPF39-208ENST00000554785 CA14Q9ULX7 337 aa1.77□□□□□ -2.13
PRPF39-208ENST00000554785 USP22Q9UPT9 525 aa1.77□□□□□ -2.13
PRPF39-208ENST00000554785 MORC2Q9Y6X9 1032 aaPredicted RBP1.77□□□□□ -2.13
PRPF39-208ENST00000554785 NWD2Q9ULI1 1742 aa1.77□□□□□ -2.13
PRPF39-208ENST00000554785 MUC3AQ02505 3323 aa1.77□□□□□ -2.13
PRPF39-208ENST00000554785 KANK1Q14678 1352 aa1.77□□□□□ -2.13
PRPF39-208ENST00000554785 ARHGEF5Q12774 1597 aa1.77□□□□□ -2.13
PRPF39-208ENST00000554785 TOPAZ1Q8N9V7 1692 aa1.77□□□□□ -2.13
PRPF39-208ENST00000554785 CASZ1Q86V15 1759 aa1.77□□□□□ -2.13
PRPF39-208ENST00000554785 TECPR2O15040 1411 aa1.77□□□□□ -2.13
PRPF39-208ENST00000554785 PTCH1Q13635 1447 aa1.77□□□□□ -2.13
PRPF39-208ENST00000554785 EEA1Q15075 1411 aa1.77□□□□□ -2.13
PRPF39-208ENST00000554785 ATP10DQ9P241 1426 aa1.77□□□□□ -2.13
PRPF39-208ENST00000554785 CCDC151A5D8V7 595 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms