RNA–Protein interactions for RNA: ENST00000554731.1

RDH11-207, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 888 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-207ENST00000554731 STX10O60499 249 aa13.05□□□□□ -0.32
RDH11-207ENST00000554731 CBFA2T3O75081 653 aa13.05□□□□□ -0.32
RDH11-207ENST00000554731 ZBED1O96006 694 aa13.05□□□□□ -0.32
RDH11-207ENST00000554731 ZNF883P0CG24 379 aa13.05□□□□□ -0.32
RDH11-207ENST00000554731 PRKCHP24723 683 aa13.05□□□□□ -0.32
RDH11-207ENST00000554731 MATKP42679 507 aa13.05□□□□□ -0.32
RDH11-207ENST00000554731 TKTL1P51854 596 aa13.05□□□□□ -0.32
RDH11-207ENST00000554731 COPAP53621 1224 aa13.05□□□□□ -0.32
RDH11-207ENST00000554731 SCAPQ12770 1279 aa13.05□□□□□ -0.32
RDH11-207ENST00000554731 DPYDQ12882 1025 aa13.05□□□□□ -0.32
RDH11-207ENST00000554731 COL9A2Q14055 689 aaPredicted RBP13.05□□□□□ -0.32
RDH11-207ENST00000554731 MPPE1Q53F39 396 aa13.05□□□□□ -0.32
RDH11-207ENST00000554731 TMEM215Q68D42 235 aa13.05□□□□□ -0.32
RDH11-207ENST00000554731 PROSER1Q86XN7 944 aa13.05□□□□□ -0.32
RDH11-207ENST00000554731 CACUL1Q86Y37 369 aa13.05□□□□□ -0.32
RDH11-207ENST00000554731 FAM217AQ8IXS0 508 aa13.05□□□□□ -0.32
RDH11-207ENST00000554731 PNPLA1Q8N8W4 532 aa13.05□□□□□ -0.32
RDH11-207ENST00000554731 RBBP8NLQ8NC74 664 aaPredicted RBP13.05□□□□□ -0.32
RDH11-207ENST00000554731 SORCS1Q8WY21 1168 aa13.05□□□□□ -0.32
RDH11-207ENST00000554731 ARID3AQ99856 593 aa13.05□□□□□ -0.32
RDH11-207ENST00000554731 PCED1AQ9H1Q7 454 aa13.05□□□□□ -0.32
RDH11-207ENST00000554731 GAREM1Q9H706 876 aa13.05□□□□□ -0.32
RDH11-207ENST00000554731 OLA1Q9NTK5 396 aaKnown RBP13.05□□□□□ -0.32
RDH11-207ENST00000554731 RAB20Q9NX57 234 aa13.05□□□□□ -0.32
RDH11-207ENST00000554731 EIF2B4Q9UI10 523 aaKnown RBP13.05□□□□□ -0.32
RDH11-207ENST00000554731 PCOLCE2Q9UKZ9 415 aa13.05□□□□□ -0.32
RDH11-207ENST00000554731 CABIN1Q9Y6J0 2220 aa13.05□□□□□ -0.32
RDH11-207ENST00000554731 ACACAQ13085 2346 aa13.05□□□□□ -0.32
RDH11-207ENST00000554731 TAF4O00268 1085 aa13.04□□□□□ -0.32
RDH11-207ENST00000554731 CAPNS1P04632 268 aa13.04□□□□□ -0.32
RDH11-207ENST00000554731 EPB41P11171 864 aaKnown RBP13.04□□□□□ -0.32
RDH11-207ENST00000554731 HLA-EP13747 358 aa13.04□□□□□ -0.32
RDH11-207ENST00000554731 HOXB3P14651 431 aaPredicted RBP13.04□□□□□ -0.32
RDH11-207ENST00000554731 HARS2P49590 506 aaKnown RBP13.04□□□□□ -0.32
RDH11-207ENST00000554731 NDUFA8P51970 172 aa13.04□□□□□ -0.32
RDH11-207ENST00000554731 ZNF445P59923 1031 aa13.04□□□□□ -0.32
RDH11-207ENST00000554731 MCCD1P59942 119 aaPredicted RBP13.04□□□□□ -0.32
RDH11-207ENST00000554731 KRT85P78386 507 aa13.04□□□□□ -0.32
RDH11-207ENST00000554731 TRIP4Q15650 581 aaPredicted RBP13.04□□□□□ -0.32
RDH11-207ENST00000554731 EDRF1Q3B7T1 1238 aa13.04□□□□□ -0.32
RDH11-207ENST00000554731 ZCWPW2Q504Y3 356 aa13.04□□□□□ -0.32
RDH11-207ENST00000554731 PM20D1Q6GTS8 502 aa13.04□□□□□ -0.32
RDH11-207ENST00000554731 CCNI2Q6ZMN8 369 aaPredicted RBP13.04□□□□□ -0.32
RDH11-207ENST00000554731 GLRX5Q86SX6 157 aa13.04□□□□□ -0.32
RDH11-207ENST00000554731 FAM124AQ86V42 546 aa13.04□□□□□ -0.32
RDH11-207ENST00000554731 FMNL3Q8IVF7 1028 aa13.04□□□□□ -0.32
RDH11-207ENST00000554731 OR2T3Q8NH03 318 aa13.04□□□□□ -0.32
RDH11-207ENST00000554731 WFIKKN2Q8TEU8 576 aa13.04□□□□□ -0.32
RDH11-207ENST00000554731 SETD7Q8WTS6 366 aaKnown RBP13.04□□□□□ -0.32
RDH11-207ENST00000554731 RNF139Q8WU17 664 aa13.04□□□□□ -0.32
RDH11-207ENST00000554731 SNX19Q92543 992 aa13.04□□□□□ -0.32
RDH11-207ENST00000554731 IPO9Q96P70 1041 aaKnown RBP13.04□□□□□ -0.32
RDH11-207ENST00000554731 ULBP1Q9BZM6 244 aa13.04□□□□□ -0.32
RDH11-207ENST00000554731 LHX5Q9H2C1 402 aa13.04□□□□□ -0.32
RDH11-207ENST00000554731 IL21RQ9HBE5 538 aa13.04□□□□□ -0.32
RDH11-207ENST00000554731 LRRC4Q9HBW1 653 aa13.04□□□□□ -0.32
RDH11-207ENST00000554731 TM7SF3Q9NS93 570 aa13.04□□□□□ -0.32
RDH11-207ENST00000554731 FNDC3AQ9Y2H6 1198 aaKnown RBP13.04□□□□□ -0.32
RDH11-207ENST00000554731 HBS1LQ9Y450 684 aaKnown RBP13.04□□□□□ -0.32
RDH11-207ENST00000554731 SPEGQ15772 3267 aa13.04□□□□□ -0.32
RDH11-207ENST00000554731 CKAP5Q14008 2032 aa13.03□□□□□ -0.32
RDH11-207ENST00000554731 FAM237AA0A1B0GTK4 181 aa13.03□□□□□ -0.32
RDH11-207ENST00000554731 XPO1O14980 1071 aaKnown RBP13.03□□□□□ -0.32
RDH11-207ENST00000554731 TSPAN3O60637 253 aa13.03□□□□□ -0.32
RDH11-207ENST00000554731 HOXD9P28356 352 aaPredicted RBP13.03□□□□□ -0.32
RDH11-207ENST00000554731 BCAT1P54687 386 aa13.03□□□□□ -0.32
RDH11-207ENST00000554731 BNC1Q01954 994 aa13.03□□□□□ -0.32
RDH11-207ENST00000554731 PDE4CQ08493 712 aa13.03□□□□□ -0.32
RDH11-207ENST00000554731 CAMK2GQ13555 558 aaPredicted RBP13.03□□□□□ -0.32
RDH11-207ENST00000554731 GOLGA7BQ2TAP0 167 aa13.03□□□□□ -0.32
RDH11-207ENST00000554731 HLA-BQ31612 363 aa13.03□□□□□ -0.32
RDH11-207ENST00000554731 FNDC3BQ53EP0 1204 aaKnown RBP13.03□□□□□ -0.32
RDH11-207ENST00000554731 KRBA2Q6ZNG9 492 aa13.03□□□□□ -0.32
RDH11-207ENST00000554731 SLCO6A1Q86UG4 719 aa13.03□□□□□ -0.32
RDH11-207ENST00000554731 C1orf216Q8TAB5 229 aa13.03□□□□□ -0.32
RDH11-207ENST00000554731 NDRG1Q92597 394 aaKnown RBP13.03□□□□□ -0.32
RDH11-207ENST00000554731 TATDN2Q93075 761 aa13.03□□□□□ -0.32
RDH11-207ENST00000554731 TMA16Q96EY4 203 aaKnown RBP13.03□□□□□ -0.32
RDH11-207ENST00000554731 EEF2KMTQ96G04 330 aa13.03□□□□□ -0.32
RDH11-207ENST00000554731 HESX1Q9UBX0 185 aa13.03□□□□□ -0.32
RDH11-207ENST00000554731 PLA2G4CQ9UP65 541 aa13.03□□□□□ -0.32
RDH11-207ENST00000554731 APC2O95996 2303 aa13.03□□□□□ -0.32
RDH11-207ENST00000554731 DMXL2Q8TDJ6 3036 aa13.03□□□□□ -0.32
RDH11-207ENST00000554731 DSPP15924 2871 aaKnown RBP13.02□□□□□ -0.33
RDH11-207ENST00000554731 A0A1B0GVT2 93 aa13.02□□□□□ -0.33
RDH11-207ENST00000554731 TULP2O00295 520 aa13.02□□□□□ -0.33
RDH11-207ENST00000554731 CETN3O15182 167 aa13.02□□□□□ -0.33
RDH11-207ENST00000554731 FLRT2O43155 660 aa13.02□□□□□ -0.33
RDH11-207ENST00000554731 LATS1O95835 1130 aa13.02□□□□□ -0.33
RDH11-207ENST00000554731 HLA-FP30511 346 aa13.02□□□□□ -0.33
RDH11-207ENST00000554731 CSNK1EP49674 416 aaKnown RBP13.02□□□□□ -0.33
RDH11-207ENST00000554731 AFF3P51826 1226 aaKnown RBP13.02□□□□□ -0.33
RDH11-207ENST00000554731 YWHAEP62258 255 aaKnown RBP13.02□□□□□ -0.33
RDH11-207ENST00000554731 ADIGQ0VDE8 80 aa13.02□□□□□ -0.33
RDH11-207ENST00000554731 BST2Q10589 180 aaKnown RBP13.02□□□□□ -0.33
RDH11-207ENST00000554731 NUMA1Q14980 2115 aa13.02□□□□□ -0.33
RDH11-207ENST00000554731 TEAD4Q15561 434 aa13.02□□□□□ -0.33
RDH11-207ENST00000554731 SGO2Q562F6 1265 aa13.02□□□□□ -0.33
RDH11-207ENST00000554731 ADGRF1Q5T601 910 aa13.02□□□□□ -0.33
RDH11-207ENST00000554731 BSPRYQ5W0U4 402 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms