RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 TSHRP16473 764 aa17.46■□□□□ 0.39
PPP4R3A-202ENST00000554390 RBL1P28749 1068 aa17.46■□□□□ 0.39
PPP4R3A-202ENST00000554390 ATXN1P54253 815 aaKnown RBP17.46■□□□□ 0.39
PPP4R3A-202ENST00000554390 TUBB3Q13509 450 aa17.46■□□□□ 0.39
PPP4R3A-202ENST00000554390 KRT81Q14533 505 aa17.46■□□□□ 0.39
PPP4R3A-202ENST00000554390 EML3Q32P44 896 aa17.46■□□□□ 0.39
PPP4R3A-202ENST00000554390 KBTBD6Q86V97 674 aa17.46■□□□□ 0.39
PPP4R3A-202ENST00000554390 RTKN2Q8IZC4 609 aa17.46■□□□□ 0.39
PPP4R3A-202ENST00000554390 NIF3L1Q9GZT8 377 aa17.46■□□□□ 0.39
PPP4R3A-202ENST00000554390 COL2A1P02458 1487 aaPredicted RBP17.46■□□□□ 0.38
PPP4R3A-202ENST00000554390 MCF2LO15068 1137 aa17.46■□□□□ 0.38
PPP4R3A-202ENST00000554390 ZNF132P52740 706 aa17.46■□□□□ 0.38
PPP4R3A-202ENST00000554390 STX3Q13277 289 aa17.46■□□□□ 0.38
PPP4R3A-202ENST00000554390 MPP3Q13368 585 aa17.46■□□□□ 0.38
PPP4R3A-202ENST00000554390 HACE1Q8IYU2 909 aa17.46■□□□□ 0.38
PPP4R3A-202ENST00000554390 NUP93Q8N1F7 819 aa17.46■□□□□ 0.38
PPP4R3A-202ENST00000554390 LRRC43Q8N309 656 aa17.46■□□□□ 0.38
PPP4R3A-202ENST00000554390 C12orf29Q8N999 325 aa17.46■□□□□ 0.38
PPP4R3A-202ENST00000554390 PPP1R13LQ8WUF5 828 aa17.46■□□□□ 0.38
PPP4R3A-202ENST00000554390 Q9H521 79 aa17.46■□□□□ 0.38
PPP4R3A-202ENST00000554390 NGRNQ9NPE2 291 aaKnown RBP17.46■□□□□ 0.38
PPP4R3A-202ENST00000554390 PGAP2Q9UHJ9 254 aa17.46■□□□□ 0.38
PPP4R3A-202ENST00000554390 USP18Q9UMW8 372 aa17.46■□□□□ 0.38
PPP4R3A-202ENST00000554390 ZNF711Q9Y462 761 aa17.46■□□□□ 0.38
PPP4R3A-202ENST00000554390 INO80B-WBP1J3KQ70 363 aa17.45■□□□□ 0.38
PPP4R3A-202ENST00000554390 M0QYV0 167 aa17.45■□□□□ 0.38
PPP4R3A-202ENST00000554390 TNFAIP8O95379 198 aa17.45■□□□□ 0.38
PPP4R3A-202ENST00000554390 CRTAMO95727 393 aa17.45■□□□□ 0.38
PPP4R3A-202ENST00000554390 SNRPAP09012 282 aaKnown RBP17.45■□□□□ 0.38
PPP4R3A-202ENST00000554390 CSH1P0DML2 217 aa17.45■□□□□ 0.38
PPP4R3A-202ENST00000554390 CSH2P0DML3 217 aa17.45■□□□□ 0.38
PPP4R3A-202ENST00000554390 SRGAP2BP0DMP2 458 aa17.45■□□□□ 0.38
PPP4R3A-202ENST00000554390 ATXN7L3BQ96GX2 97 aa17.45■□□□□ 0.38
PPP4R3A-202ENST00000554390 INO80BQ9C086 356 aaPredicted RBP17.45■□□□□ 0.38
PPP4R3A-202ENST00000554390 XAB2Q9HCS7 855 aaKnown RBP17.45■□□□□ 0.38
PPP4R3A-202ENST00000554390 AP4B1Q9Y6B7 739 aa17.45■□□□□ 0.38
PPP4R3A-202ENST00000554390 LOC100653049A0A140TA62 436 aa17.45■□□□□ 0.38
PPP4R3A-202ENST00000554390 ADCY3O60266 1144 aa17.45■□□□□ 0.38
PPP4R3A-202ENST00000554390 TOM1L1O75674 476 aa17.45■□□□□ 0.38
PPP4R3A-202ENST00000554390 KRT34O76011 436 aa17.45■□□□□ 0.38
PPP4R3A-202ENST00000554390 KRT37O76014 449 aa17.45■□□□□ 0.38
PPP4R3A-202ENST00000554390 KLHL2O95198 593 aa17.45■□□□□ 0.38
PPP4R3A-202ENST00000554390 CD1EP15812 388 aa17.45■□□□□ 0.38
PPP4R3A-202ENST00000554390 VARSP26640 1264 aaKnown RBP17.45■□□□□ 0.38
PPP4R3A-202ENST00000554390 PTPN7P35236 360 aa17.45■□□□□ 0.38
PPP4R3A-202ENST00000554390 ASPAP45381 313 aa17.45■□□□□ 0.38
PPP4R3A-202ENST00000554390 PHKA2P46019 1235 aa17.45■□□□□ 0.38
PPP4R3A-202ENST00000554390 CA9Q16790 459 aa17.45■□□□□ 0.38
PPP4R3A-202ENST00000554390 LRRC38Q5VT99 294 aa17.45■□□□□ 0.38
PPP4R3A-202ENST00000554390 ZNF410Q86VK4 478 aa17.45■□□□□ 0.38
PPP4R3A-202ENST00000554390 FNDC8Q8TC99 324 aa17.45■□□□□ 0.38
PPP4R3A-202ENST00000554390 PPP1R36Q96LQ0 422 aa17.45■□□□□ 0.38
PPP4R3A-202ENST00000554390 MYOZ2Q9NPC6 264 aa17.45■□□□□ 0.38
PPP4R3A-202ENST00000554390 PLK2Q9NYY3 685 aa17.45■□□□□ 0.38
PPP4R3A-202ENST00000554390 PAIP2BQ9ULR5 123 aaKnown RBP17.45■□□□□ 0.38
PPP4R3A-202ENST00000554390 WDR81Q562E7 1941 aa17.45■□□□□ 0.38
PPP4R3A-202ENST00000554390 TFE3P19532 575 aaPredicted RBP17.44■□□□□ 0.38
PPP4R3A-202ENST00000554390 ADORA2AP29274 412 aa17.44■□□□□ 0.38
PPP4R3A-202ENST00000554390 ABCG1P45844 678 aa17.44■□□□□ 0.38
PPP4R3A-202ENST00000554390 PGGT1BP53609 377 aa17.44■□□□□ 0.38
PPP4R3A-202ENST00000554390 LY6KQ17RY6 165 aa17.44■□□□□ 0.38
PPP4R3A-202ENST00000554390 BBS12Q6ZW61 710 aa17.44■□□□□ 0.38
PPP4R3A-202ENST00000554390 WDR75Q8IWA0 830 aaKnown RBP17.44■□□□□ 0.38
PPP4R3A-202ENST00000554390 PQLC1Q8N2U9 271 aa17.44■□□□□ 0.38
PPP4R3A-202ENST00000554390 SIKE1Q9BRV8 207 aa17.44■□□□□ 0.38
PPP4R3A-202ENST00000554390 ITGA11Q9UKX5 1188 aa17.44■□□□□ 0.38
PPP4R3A-202ENST00000554390 ZNF214Q9UL59 606 aaPredicted RBP17.44■□□□□ 0.38
PPP4R3A-202ENST00000554390 APOBEC2Q9Y235 224 aaKnown RBP17.44■□□□□ 0.38
PPP4R3A-202ENST00000554390 TEX264Q9Y6I9 313 aa17.44■□□□□ 0.38
PPP4R3A-202ENST00000554390 SIN3BO75182 1162 aa17.44■□□□□ 0.38
PPP4R3A-202ENST00000554390 RFPL1O75677 317 aa17.44■□□□□ 0.38
PPP4R3A-202ENST00000554390 HMGCRP04035 888 aa17.44■□□□□ 0.38
PPP4R3A-202ENST00000554390 BPGMP07738 259 aa17.44■□□□□ 0.38
PPP4R3A-202ENST00000554390 ITGAXP20702 1163 aa17.44■□□□□ 0.38
PPP4R3A-202ENST00000554390 HSPA1LP34931 641 aa17.44■□□□□ 0.38
PPP4R3A-202ENST00000554390 GTF2A2P52657 109 aa17.44■□□□□ 0.38
PPP4R3A-202ENST00000554390 IGBP1P78318 339 aa17.44■□□□□ 0.38
PPP4R3A-202ENST00000554390 VWA5B1Q5TIE3 1220 aa17.44■□□□□ 0.38
PPP4R3A-202ENST00000554390 ALDH16A1Q8IZ83 802 aa17.44■□□□□ 0.38
PPP4R3A-202ENST00000554390 AHI1Q8N157 1196 aa17.44■□□□□ 0.38
PPP4R3A-202ENST00000554390 FBXW8Q8N3Y1 598 aa17.44■□□□□ 0.38
PPP4R3A-202ENST00000554390 RIN3Q8TB24 985 aa17.44■□□□□ 0.38
PPP4R3A-202ENST00000554390 GPRASP2Q96D09 838 aa17.44■□□□□ 0.38
PPP4R3A-202ENST00000554390 TEPSINQ96N21 525 aa17.44■□□□□ 0.38
PPP4R3A-202ENST00000554390 PCYT2Q99447 389 aa17.44■□□□□ 0.38
PPP4R3A-202ENST00000554390 DNAJC5Q9H3Z4 198 aa17.44■□□□□ 0.38
PPP4R3A-202ENST00000554390 ZNF696Q9H7X3 374 aa17.44■□□□□ 0.38
PPP4R3A-202ENST00000554390 THAP1Q9NVV9 213 aa17.44■□□□□ 0.38
PPP4R3A-202ENST00000554390 PPP1R1BQ9UD71 204 aaPredicted RBP17.44■□□□□ 0.38
PPP4R3A-202ENST00000554390 ZC3H7BQ9UGR2 993 aaKnown RBP17.44■□□□□ 0.38
PPP4R3A-202ENST00000554390 HEMK1Q9Y5R4 338 aaPredicted RBP17.44■□□□□ 0.38
PPP4R3A-202ENST00000554390 ADGRA2Q96PE1 1338 aa17.44■□□□□ 0.38
PPP4R3A-202ENST00000554390 BOLA2-SMG1P6H3BVE0 249 aa17.43■□□□□ 0.38
PPP4R3A-202ENST00000554390 KCNA4P22459 653 aa17.43■□□□□ 0.38
PPP4R3A-202ENST00000554390 HDAC4P56524 1084 aa17.43■□□□□ 0.38
PPP4R3A-202ENST00000554390 ROR1Q01973 937 aa17.43■□□□□ 0.38
PPP4R3A-202ENST00000554390 SLC44A4Q53GD3 710 aa17.43■□□□□ 0.38
PPP4R3A-202ENST00000554390 ANGEL2Q5VTE6 544 aaKnown RBP17.43■□□□□ 0.38
PPP4R3A-202ENST00000554390 CES3Q6UWW8 571 aa17.43■□□□□ 0.38
PPP4R3A-202ENST00000554390 SPNS2Q8IVW8 549 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms