RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 SLC5A3P53794 718 aa14.7□□□□□ -0.06
SPTLC2-202ENST00000554365 SIM1P81133 766 aaPredicted RBP14.7□□□□□ -0.06
SPTLC2-202ENST00000554365 PREPLQ4J6C6 727 aaPredicted RBP14.7□□□□□ -0.06
SPTLC2-202ENST00000554365 SMYD5Q6GMV2 418 aa14.7□□□□□ -0.06
SPTLC2-202ENST00000554365 NUDT18Q6ZVK8 323 aa14.7□□□□□ -0.06
SPTLC2-202ENST00000554365 TRMT11Q7Z4G4 463 aaKnown RBP14.7□□□□□ -0.06
SPTLC2-202ENST00000554365 IRF2BP2Q7Z5L9 587 aa14.7□□□□□ -0.06
SPTLC2-202ENST00000554365 TMEM25Q86YD3 366 aa14.7□□□□□ -0.06
SPTLC2-202ENST00000554365 TMEM139Q8IV31 216 aa14.7□□□□□ -0.06
SPTLC2-202ENST00000554365 CNGA4Q8IV77 575 aa14.7□□□□□ -0.06
SPTLC2-202ENST00000554365 ETFBKMTQ8IXQ9 262 aa14.7□□□□□ -0.06
SPTLC2-202ENST00000554365 HDDC3Q8N4P3 179 aa14.7□□□□□ -0.06
SPTLC2-202ENST00000554365 OR8K1Q8NGG5 319 aa14.7□□□□□ -0.06
SPTLC2-202ENST00000554365 SYN2Q92777 582 aaPredicted RBP14.7□□□□□ -0.06
SPTLC2-202ENST00000554365 GATA6Q92908 595 aa14.7□□□□□ -0.06
SPTLC2-202ENST00000554365 WBP2Q969T9 261 aa14.7□□□□□ -0.06
SPTLC2-202ENST00000554365 ERLEC1Q96DZ1 483 aa14.7□□□□□ -0.06
SPTLC2-202ENST00000554365 SPAG5Q96R06 1193 aa14.7□□□□□ -0.06
SPTLC2-202ENST00000554365 DMAP1Q9NPF5 467 aaPredicted RBP14.7□□□□□ -0.06
SPTLC2-202ENST00000554365 SPHK2Q9NRA0 654 aa14.7□□□□□ -0.06
SPTLC2-202ENST00000554365 CISHQ9NSE2 258 aa14.7□□□□□ -0.06
SPTLC2-202ENST00000554365 GMIPQ9P107 970 aa14.7□□□□□ -0.06
SPTLC2-202ENST00000554365 HMGXB4Q9UGU5 601 aa14.7□□□□□ -0.06
SPTLC2-202ENST00000554365 ASPMQ8IZT6 3477 aa14.69□□□□□ -0.06
SPTLC2-202ENST00000554365 TNRC6BQ9UPQ9 1833 aaKnown RBP14.69□□□□□ -0.06
SPTLC2-202ENST00000554365 TRIM24O15164 1050 aa14.69□□□□□ -0.06
SPTLC2-202ENST00000554365 CILPO75339 1184 aa14.69□□□□□ -0.06
SPTLC2-202ENST00000554365 TPM1P09493 284 aa14.69□□□□□ -0.06
SPTLC2-202ENST00000554365 GABRG2P18507 467 aa14.69□□□□□ -0.06
SPTLC2-202ENST00000554365 CLCN1P35523 988 aa14.69□□□□□ -0.06
SPTLC2-202ENST00000554365 STAT1P42224 750 aa14.69□□□□□ -0.06
SPTLC2-202ENST00000554365 GSDMDP57764 484 aa14.69□□□□□ -0.06
SPTLC2-202ENST00000554365 GFPT1Q06210 699 aaPredicted RBP14.69□□□□□ -0.06
SPTLC2-202ENST00000554365 MEA1Q16626 185 aa14.69□□□□□ -0.06
SPTLC2-202ENST00000554365 DUOXA1Q1HG43 343 aa14.69□□□□□ -0.06
SPTLC2-202ENST00000554365 HGSNATQ68CP4 663 aa14.69□□□□□ -0.06
SPTLC2-202ENST00000554365 SLC36A4Q6YBV0 504 aa14.69□□□□□ -0.06
SPTLC2-202ENST00000554365 TERB1Q8NA31 727 aa14.69□□□□□ -0.06
SPTLC2-202ENST00000554365 ZNF397Q8NF99 534 aaPredicted RBP14.69□□□□□ -0.06
SPTLC2-202ENST00000554365 ZCCHC14Q8WYQ9 949 aaKnown RBP14.69□□□□□ -0.06
SPTLC2-202ENST00000554365 PANX2Q96RD6 677 aa14.69□□□□□ -0.06
SPTLC2-202ENST00000554365 TWNKQ96RR1 684 aa14.69□□□□□ -0.06
SPTLC2-202ENST00000554365 FAM124BQ9H5Z6 455 aaPredicted RBP14.69□□□□□ -0.06
SPTLC2-202ENST00000554365 CALCOCO1Q9P1Z2 691 aa14.69□□□□□ -0.06
SPTLC2-202ENST00000554365 SLC6A14Q9UN76 642 aa14.69□□□□□ -0.06
SPTLC2-202ENST00000554365 ZBTB24O43167 697 aaPredicted RBP14.68□□□□□ -0.06
SPTLC2-202ENST00000554365 AP1G2O75843 785 aa14.68□□□□□ -0.06
SPTLC2-202ENST00000554365 GFPT2O94808 682 aa14.68□□□□□ -0.06
SPTLC2-202ENST00000554365 CALCAP01258 141 aa14.68□□□□□ -0.06
SPTLC2-202ENST00000554365 CD58P19256 250 aa14.68□□□□□ -0.06
SPTLC2-202ENST00000554365 NTSR1P30989 418 aa14.68□□□□□ -0.06
SPTLC2-202ENST00000554365 HOXD12P35452 270 aa14.68□□□□□ -0.06
SPTLC2-202ENST00000554365 SEMA3BQ13214 749 aa14.68□□□□□ -0.06
SPTLC2-202ENST00000554365 SFMBT2Q5VUG0 894 aa14.68□□□□□ -0.06
SPTLC2-202ENST00000554365 SNX30Q5VWJ9 437 aa14.68□□□□□ -0.06
SPTLC2-202ENST00000554365 PEAR1Q5VY43 1037 aaPredicted RBP14.68□□□□□ -0.06
SPTLC2-202ENST00000554365 EGFLAMQ63HQ2 1017 aa14.68□□□□□ -0.06
SPTLC2-202ENST00000554365 GRAMD4Q6IC98 578 aa14.68□□□□□ -0.06
SPTLC2-202ENST00000554365 PAQR9Q6ZVX9 377 aa14.68□□□□□ -0.06
SPTLC2-202ENST00000554365 PIP4P1Q86T03 277 aa14.68□□□□□ -0.06
SPTLC2-202ENST00000554365 ACOT1Q86TX2 421 aa14.68□□□□□ -0.06
SPTLC2-202ENST00000554365 RBBP8NLQ8NC74 664 aaPredicted RBP14.68□□□□□ -0.06
SPTLC2-202ENST00000554365 CEP76Q8TAP6 659 aa14.68□□□□□ -0.06
SPTLC2-202ENST00000554365 KCNV2Q8TDN2 545 aa14.68□□□□□ -0.06
SPTLC2-202ENST00000554365 SMARCD1Q96GM5 515 aa14.68□□□□□ -0.06
SPTLC2-202ENST00000554365 TNIP3Q96KP6 325 aa14.68□□□□□ -0.06
SPTLC2-202ENST00000554365 SYT11Q9BT88 431 aa14.68□□□□□ -0.06
SPTLC2-202ENST00000554365 ACP6Q9NPH0 428 aa14.68□□□□□ -0.06
SPTLC2-202ENST00000554365 KRT82Q9NSB4 513 aa14.68□□□□□ -0.06
SPTLC2-202ENST00000554365 DNAJC17Q9NVM6 304 aaKnown RBP14.68□□□□□ -0.06
SPTLC2-202ENST00000554365 KLK13Q9UKR3 277 aa14.68□□□□□ -0.06
SPTLC2-202ENST00000554365 PCDHB4Q9Y5E5 795 aa14.68□□□□□ -0.06
SPTLC2-202ENST00000554365 MYOFQ9NZM1 2061 aa14.68□□□□□ -0.06
SPTLC2-202ENST00000554365 SRRM3A6NNA2 597 aaPredicted RBP14.67□□□□□ -0.06
SPTLC2-202ENST00000554365 NEDD8-MDP1E9PL57 170 aa14.67□□□□□ -0.06
SPTLC2-202ENST00000554365 CYP26A1O43174 497 aa14.67□□□□□ -0.06
SPTLC2-202ENST00000554365 TLR5O60602 858 aa14.67□□□□□ -0.06
SPTLC2-202ENST00000554365 OPHN1O60890 802 aa14.67□□□□□ -0.06
SPTLC2-202ENST00000554365 SERPINF2P08697 491 aa14.67□□□□□ -0.06
SPTLC2-202ENST00000554365 CCDC130P13994 396 aa14.67□□□□□ -0.06
SPTLC2-202ENST00000554365 PRKCIP41743 596 aa14.67□□□□□ -0.06
SPTLC2-202ENST00000554365 TUBP50607 506 aa14.67□□□□□ -0.06
SPTLC2-202ENST00000554365 NDST1P52848 882 aa14.67□□□□□ -0.06
SPTLC2-202ENST00000554365 RAD23BP54727 409 aa14.67□□□□□ -0.06
SPTLC2-202ENST00000554365 YWHAEP62258 255 aaKnown RBP14.67□□□□□ -0.06
SPTLC2-202ENST00000554365 ZNF33AQ06730 810 aa14.67□□□□□ -0.06
SPTLC2-202ENST00000554365 ORC1Q13415 861 aa14.67□□□□□ -0.06
SPTLC2-202ENST00000554365 ASIC2Q16515 512 aa14.67□□□□□ -0.06
SPTLC2-202ENST00000554365 SDE2Q6IQ49 451 aa14.67□□□□□ -0.06
SPTLC2-202ENST00000554365 TMEM270Q6UE05 265 aa14.67□□□□□ -0.06
SPTLC2-202ENST00000554365 MIB1Q86YT6 1006 aa14.67□□□□□ -0.06
SPTLC2-202ENST00000554365 LRRC8AQ8IWT6 810 aa14.67□□□□□ -0.06
SPTLC2-202ENST00000554365 CHPFQ8IZ52 775 aa14.67□□□□□ -0.06
SPTLC2-202ENST00000554365 MINDY1Q8N5J2 469 aa14.67□□□□□ -0.06
SPTLC2-202ENST00000554365 SLC4A11Q8NBS3 891 aa14.67□□□□□ -0.06
SPTLC2-202ENST00000554365 OR2I1PQ8NGU4 316 aa14.67□□□□□ -0.06
SPTLC2-202ENST00000554365 CHP1Q99653 195 aa14.67□□□□□ -0.06
SPTLC2-202ENST00000554365 ZSWIM1Q9BR11 485 aa14.67□□□□□ -0.06
SPTLC2-202ENST00000554365 BBS2Q9BXC9 721 aa14.67□□□□□ -0.06
SPTLC2-202ENST00000554365 NUCKS1Q9H1E3 243 aaKnown RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms