RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 TMA16Q96EY4 203 aaKnown RBP9.71□□□□□ -0.86
CHD8-206ENST00000553870 PIWIL1Q96J94 861 aaKnown RBP9.71□□□□□ -0.86
CHD8-206ENST00000553870 BTN2A3PQ96KV6 586 aa9.71□□□□□ -0.86
CHD8-206ENST00000553870 FCRL2Q96LA5 508 aaPredicted RBP9.71□□□□□ -0.86
CHD8-206ENST00000553870 NPY6RQ99463 290 aa9.71□□□□□ -0.86
CHD8-206ENST00000553870 BBS2Q9BXC9 721 aa9.71□□□□□ -0.86
CHD8-206ENST00000553870 TRIM5Q9C035 493 aa9.71□□□□□ -0.86
CHD8-206ENST00000553870 FAM204AQ9H8W3 233 aa9.71□□□□□ -0.86
CHD8-206ENST00000553870 FBXO4Q9UKT5 387 aa9.71□□□□□ -0.86
CHD8-206ENST00000553870 SIGLEC16A6NMB1 481 aa9.7□□□□□ -0.86
CHD8-206ENST00000553870 KCNU1A8MYU2 1149 aa9.7□□□□□ -0.86
CHD8-206ENST00000553870 M0QYT0 321 aa9.7□□□□□ -0.86
CHD8-206ENST00000553870 GFRA2O00451 464 aa9.7□□□□□ -0.86
CHD8-206ENST00000553870 SCAMP3O14828 347 aaKnown RBP9.7□□□□□ -0.86
CHD8-206ENST00000553870 MSI1O43347 362 aaKnown RBP9.7□□□□□ -0.86
CHD8-206ENST00000553870 LAMTOR5O43504 91 aa9.7□□□□□ -0.86
CHD8-206ENST00000553870 TIMM44O43615 452 aa9.7□□□□□ -0.86
CHD8-206ENST00000553870 RTN2O75298 545 aa9.7□□□□□ -0.86
CHD8-206ENST00000553870 TULP3O75386 442 aa9.7□□□□□ -0.86
CHD8-206ENST00000553870 GRAP2O75791 330 aa9.7□□□□□ -0.86
CHD8-206ENST00000553870 ENDOD1O94919 500 aa9.7□□□□□ -0.86
CHD8-206ENST00000553870 KAT7O95251 611 aa9.7□□□□□ -0.86
CHD8-206ENST00000553870 PAPSS2O95340 614 aaPredicted RBP9.7□□□□□ -0.86
CHD8-206ENST00000553870 GYPCP04921 128 aa9.7□□□□□ -0.86
CHD8-206ENST00000553870 KRT3P12035 628 aa9.7□□□□□ -0.86
CHD8-206ENST00000553870 TYRP14679 529 aa9.7□□□□□ -0.86
CHD8-206ENST00000553870 COL9A1P20849 921 aa9.7□□□□□ -0.86
CHD8-206ENST00000553870 CASP14P31944 242 aa9.7□□□□□ -0.86
CHD8-206ENST00000553870 CXCR3P49682 368 aa9.7□□□□□ -0.86
CHD8-206ENST00000553870 CCR3P51677 355 aa9.7□□□□□ -0.86
CHD8-206ENST00000553870 PTPN5P54829 565 aa9.7□□□□□ -0.86
CHD8-206ENST00000553870 RNASE9P60153 205 aaKnown RBP9.7□□□□□ -0.86
CHD8-206ENST00000553870 MRPS21P82921 87 aaKnown RBP9.7□□□□□ -0.86
CHD8-206ENST00000553870 ZC3H12AQ5D1E8 599 aaKnown RBP9.7□□□□□ -0.86
CHD8-206ENST00000553870 BRMS1LQ5PSV4 323 aa9.7□□□□□ -0.86
CHD8-206ENST00000553870 FYB2Q5VWT5 728 aa9.7□□□□□ -0.86
CHD8-206ENST00000553870 HGSNATQ68CP4 663 aa9.7□□□□□ -0.86
CHD8-206ENST00000553870 GRAMD4Q6IC98 578 aa9.7□□□□□ -0.86
CHD8-206ENST00000553870 TPGS1Q6ZTW0 290 aa9.7□□□□□ -0.86
CHD8-206ENST00000553870 MON1BQ7L1V2 547 aa9.7□□□□□ -0.86
CHD8-206ENST00000553870 ZNF571Q7Z3V5 609 aaPredicted RBP9.7□□□□□ -0.86
CHD8-206ENST00000553870 MCOLN2Q8IZK6 566 aa9.7□□□□□ -0.86
CHD8-206ENST00000553870 OR8K1Q8NGG5 319 aa9.7□□□□□ -0.86
CHD8-206ENST00000553870 CPLX3Q8WVH0 158 aa9.7□□□□□ -0.86
CHD8-206ENST00000553870 RNF34Q969K3 372 aa9.7□□□□□ -0.86
CHD8-206ENST00000553870 TRIM11Q96F44 468 aa9.7□□□□□ -0.86
CHD8-206ENST00000553870 C11orf70Q9BRQ4 267 aa9.7□□□□□ -0.86
CHD8-206ENST00000553870 SELENOOQ9BVL4 669 aa9.7□□□□□ -0.86
CHD8-206ENST00000553870 FAM126AQ9BYI3 521 aaPredicted RBP9.7□□□□□ -0.86
CHD8-206ENST00000553870 WDCPQ9H6R7 721 aa9.7□□□□□ -0.86
CHD8-206ENST00000553870 FBRSL1Q9HCM7 1045 aaKnown RBP9.7□□□□□ -0.86
CHD8-206ENST00000553870 ZNHIT6Q9NWK9 470 aaKnown RBP9.7□□□□□ -0.86
CHD8-206ENST00000553870 DDIT4Q9NX09 232 aa9.7□□□□□ -0.86
CHD8-206ENST00000553870 SLC27A6Q9Y2P4 619 aa9.7□□□□□ -0.86
CHD8-206ENST00000553870 STARD13Q9Y3M8 1113 aa9.7□□□□□ -0.86
CHD8-206ENST00000553870 TYW5A2RUC4 315 aaKnown RBP9.69□□□□□ -0.86
CHD8-206ENST00000553870 ANKRD62A6NC57 917 aa9.69□□□□□ -0.86
CHD8-206ENST00000553870 TBC1D3BA6NDS4 549 aa9.69□□□□□ -0.86
CHD8-206ENST00000553870 C2CD4BA6NLJ0 364 aa9.69□□□□□ -0.86
CHD8-206ENST00000553870 NEDD8-MDP1E9PL57 170 aa9.69□□□□□ -0.86
CHD8-206ENST00000553870 GOLGA8SH3BPF8 625 aa9.69□□□□□ -0.86
CHD8-206ENST00000553870 K7EQS6 105 aa9.69□□□□□ -0.86
CHD8-206ENST00000553870 NPC1O15118 1278 aa9.69□□□□□ -0.86
CHD8-206ENST00000553870 EGFP01133 1207 aa9.69□□□□□ -0.86
CHD8-206ENST00000553870 FTLP02792 175 aaPredicted RBP9.69□□□□□ -0.86
CHD8-206ENST00000553870 CISD3P0C7P0 127 aa9.69□□□□□ -0.86
CHD8-206ENST00000553870 MYBL1P10243 752 aa9.69□□□□□ -0.86
CHD8-206ENST00000553870 SKILP12757 684 aa9.69□□□□□ -0.86
CHD8-206ENST00000553870 HOXA6P31267 233 aa9.69□□□□□ -0.86
CHD8-206ENST00000553870 SDC4P31431 198 aa9.69□□□□□ -0.86
CHD8-206ENST00000553870 FLT3P36888 993 aa9.69□□□□□ -0.86
CHD8-206ENST00000553870 PTPN9P43378 593 aa9.69□□□□□ -0.86
CHD8-206ENST00000553870 CXCL12P48061 93 aa9.69□□□□□ -0.86
CHD8-206ENST00000553870 SLC6A11P48066 632 aa9.69□□□□□ -0.86
CHD8-206ENST00000553870 MTAPQ13126 283 aa9.69□□□□□ -0.86
CHD8-206ENST00000553870 ZNF528Q3MIS6 628 aa9.69□□□□□ -0.86
CHD8-206ENST00000553870 TDRD12Q587J7 1177 aaKnown RBP9.69□□□□□ -0.86
CHD8-206ENST00000553870 PIK3R6Q5UE93 754 aa9.69□□□□□ -0.86
CHD8-206ENST00000553870 ZNF318Q5VUA4 2279 aa9.69□□□□□ -0.86
CHD8-206ENST00000553870 RNF43Q68DV7 783 aa9.69□□□□□ -0.86
CHD8-206ENST00000553870 STRADAQ7RTN6 431 aa9.69□□□□□ -0.86
CHD8-206ENST00000553870 BNIPLQ7Z465 357 aa9.69□□□□□ -0.86
CHD8-206ENST00000553870 ADAM32Q8TC27 787 aa9.69□□□□□ -0.86
CHD8-206ENST00000553870 DDI1Q8WTU0 396 aa9.69□□□□□ -0.86
CHD8-206ENST00000553870 MRFAP1L1Q96HT8 127 aa9.69□□□□□ -0.86
CHD8-206ENST00000553870 C1orf74Q96LT6 269 aa9.69□□□□□ -0.86
CHD8-206ENST00000553870 DNAJC7Q99615 494 aa9.69□□□□□ -0.86
CHD8-206ENST00000553870 RBSNQ9H1K0 784 aa9.69□□□□□ -0.86
CHD8-206ENST00000553870 ISCUQ9H1K1 167 aa9.69□□□□□ -0.86
CHD8-206ENST00000553870 ARHGEF4Q9NR80 690 aa9.69□□□□□ -0.86
CHD8-206ENST00000553870 PARVAQ9NVD7 372 aa9.69□□□□□ -0.86
CHD8-206ENST00000553870 DNAJC17Q9NVM6 304 aaKnown RBP9.69□□□□□ -0.86
CHD8-206ENST00000553870 SPATA6Q9NWH7 488 aaPredicted RBP9.69□□□□□ -0.86
CHD8-206ENST00000553870 ADAMTS1Q9UHI8 967 aa9.69□□□□□ -0.86
CHD8-206ENST00000553870 SSU72P8A0A1W2PR75 194 aa9.68□□□□□ -0.86
CHD8-206ENST00000553870 TCRBV5S1A1TA0A578 114 aa9.68□□□□□ -0.86
CHD8-206ENST00000553870 DDX3XO00571 662 aaKnown RBP eCLIP9.68□□□□□ -0.86
CHD8-206ENST00000553870 PDGFRAP16234 1089 aa9.68□□□□□ -0.86
CHD8-206ENST00000553870 DESP17661 470 aa9.68□□□□□ -0.86
CHD8-206ENST00000553870 RDXP35241 583 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms