RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 CLEC20AQ6ZU45 233 aa9.53□□□□□ -0.88
PRKCH-208ENST00000553846 EPM2AIP1Q7L775 607 aaPredicted RBP9.53□□□□□ -0.88
PRKCH-208ENST00000553846 CRYBG2Q8N1P7 616 aa9.53□□□□□ -0.88
PRKCH-208ENST00000553846 CPXM2Q8N436 756 aa9.53□□□□□ -0.88
PRKCH-208ENST00000553846 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.53□□□□□ -0.88
PRKCH-208ENST00000553846 ENGASEQ8NFI3 743 aa9.53□□□□□ -0.88
PRKCH-208ENST00000553846 NACA2Q9H009 215 aa9.53□□□□□ -0.88
PRKCH-208ENST00000553846 FBXO44Q9H4M3 255 aa9.53□□□□□ -0.88
PRKCH-208ENST00000553846 CPNE5Q9HCH3 593 aa9.53□□□□□ -0.88
PRKCH-208ENST00000553846 SERGEFQ9UGK8 458 aa9.53□□□□□ -0.88
PRKCH-208ENST00000553846 LSM7Q9UK45 103 aaKnown RBP9.53□□□□□ -0.88
PRKCH-208ENST00000553846 NUDT5Q9UKK9 219 aa9.53□□□□□ -0.88
PRKCH-208ENST00000553846 AK5Q9Y6K8 562 aa9.53□□□□□ -0.88
PRKCH-208ENST00000553846 ATP8B3O60423 1300 aa9.53□□□□□ -0.88
PRKCH-208ENST00000553846 A0A1W2PPC4 97 aa9.52□□□□□ -0.89
PRKCH-208ENST00000553846 ACADMP11310 421 aa9.52□□□□□ -0.89
PRKCH-208ENST00000553846 HLA-FP30511 346 aa9.52□□□□□ -0.89
PRKCH-208ENST00000553846 ATICP31939 592 aa9.52□□□□□ -0.89
PRKCH-208ENST00000553846 ACTN2P35609 894 aa9.52□□□□□ -0.89
PRKCH-208ENST00000553846 PLA2G4AP47712 749 aa9.52□□□□□ -0.89
PRKCH-208ENST00000553846 RXRGP48443 463 aa9.52□□□□□ -0.89
PRKCH-208ENST00000553846 BCAT1P54687 386 aa9.52□□□□□ -0.89
PRKCH-208ENST00000553846 MAP3K7CLP57077 242 aa9.52□□□□□ -0.89
PRKCH-208ENST00000553846 CLDN10P78369 228 aa9.52□□□□□ -0.89
PRKCH-208ENST00000553846 KCNC4Q03721 635 aa9.52□□□□□ -0.89
PRKCH-208ENST00000553846 PDE4CQ08493 712 aa9.52□□□□□ -0.89
PRKCH-208ENST00000553846 SPTAN1Q13813 2472 aaKnown RBP9.52□□□□□ -0.89
PRKCH-208ENST00000553846 LY6DQ14210 128 aa9.52□□□□□ -0.89
PRKCH-208ENST00000553846 BMT2Q1RMZ1 405 aa9.52□□□□□ -0.89
PRKCH-208ENST00000553846 PROX2Q3B8N5 592 aa9.52□□□□□ -0.89
PRKCH-208ENST00000553846 CDCP2Q5VXM1 449 aa9.52□□□□□ -0.89
PRKCH-208ENST00000553846 KIAA0895LQ68EN5 471 aa9.52□□□□□ -0.89
PRKCH-208ENST00000553846 MCTP1Q6DN14 999 aa9.52□□□□□ -0.89
PRKCH-208ENST00000553846 SERPINA13PQ6UXR4 307 aa9.52□□□□□ -0.89
PRKCH-208ENST00000553846 CCDC186Q7Z3E2 898 aa9.52□□□□□ -0.89
PRKCH-208ENST00000553846 ACOT1Q86TX2 421 aa9.52□□□□□ -0.89
PRKCH-208ENST00000553846 ADIPOR2Q86V24 386 aa9.52□□□□□ -0.89
PRKCH-208ENST00000553846 SYCP3Q8IZU3 236 aa9.52□□□□□ -0.89
PRKCH-208ENST00000553846 ZNF366Q8N895 744 aa9.52□□□□□ -0.89
PRKCH-208ENST00000553846 SLC2A14Q8TDB8 520 aa9.52□□□□□ -0.89
PRKCH-208ENST00000553846 UCMAQ8WVF2 138 aa9.52□□□□□ -0.89
PRKCH-208ENST00000553846 ELMO3Q96BJ8 720 aa9.52□□□□□ -0.89
PRKCH-208ENST00000553846 MYO19Q96H55 970 aa9.52□□□□□ -0.89
PRKCH-208ENST00000553846 HNRNPABQ99729 332 aaKnown RBP9.52□□□□□ -0.89
PRKCH-208ENST00000553846 SLC2A11Q9BYW1 496 aa9.52□□□□□ -0.89
PRKCH-208ENST00000553846 BTBD1Q9H0C5 482 aa9.52□□□□□ -0.89
PRKCH-208ENST00000553846 FBRSQ9HAH7 460 aa9.52□□□□□ -0.89
PRKCH-208ENST00000553846 SGK2Q9HBY8 427 aa9.52□□□□□ -0.89
PRKCH-208ENST00000553846 PNPLA8Q9NP80 782 aa9.52□□□□□ -0.89
PRKCH-208ENST00000553846 ASCL3Q9NQ33 180 aa9.52□□□□□ -0.89
PRKCH-208ENST00000553846 PRSS16Q9NQE7 514 aa9.52□□□□□ -0.89
PRKCH-208ENST00000553846 AGPAT3Q9NRZ7 376 aa9.52□□□□□ -0.89
PRKCH-208ENST00000553846 NXF1Q9UBU9 619 aaKnown RBP9.52□□□□□ -0.89
PRKCH-208ENST00000553846 FBXO2Q9UK22 296 aaPredicted RBP9.52□□□□□ -0.89
PRKCH-208ENST00000553846 AGO1Q9UL18 857 aaKnown RBP9.52□□□□□ -0.89
PRKCH-208ENST00000553846 USP3Q9Y6I4 520 aa9.52□□□□□ -0.89
PRKCH-208ENST00000553846 UTP20O75691 2785 aaKnown RBP9.52□□□□□ -0.89
PRKCH-208ENST00000553846 NOTCH2Q04721 2471 aa9.51□□□□□ -0.89
PRKCH-208ENST00000553846 YKT6O15498 198 aa9.51□□□□□ -0.89
PRKCH-208ENST00000553846 TIMM44O43615 452 aa9.51□□□□□ -0.89
PRKCH-208ENST00000553846 LZTS3O60299 673 aaPredicted RBP9.51□□□□□ -0.89
PRKCH-208ENST00000553846 FSBPO95073 299 aa9.51□□□□□ -0.89
PRKCH-208ENST00000553846 VNN1O95497 513 aa9.51□□□□□ -0.89
PRKCH-208ENST00000553846 BMP15O95972 392 aa9.51□□□□□ -0.89
PRKCH-208ENST00000553846 DLATP10515 647 aaKnown RBP9.51□□□□□ -0.89
PRKCH-208ENST00000553846 RARGP13631 454 aa9.51□□□□□ -0.89
PRKCH-208ENST00000553846 GLDCP23378 1020 aa9.51□□□□□ -0.89
PRKCH-208ENST00000553846 ACP1P24666 158 aa9.51□□□□□ -0.89
PRKCH-208ENST00000553846 CHKAP35790 457 aa9.51□□□□□ -0.89
PRKCH-208ENST00000553846 KIF11P52732 1056 aa9.51□□□□□ -0.89
PRKCH-208ENST00000553846 TMPRSS3P57727 454 aa9.51□□□□□ -0.89
PRKCH-208ENST00000553846 NXPH1P58417 271 aa9.51□□□□□ -0.89
PRKCH-208ENST00000553846 GOLGA8FQ08AF8 430 aa9.51□□□□□ -0.89
PRKCH-208ENST00000553846 GOLGA8DPQ0D2H9 430 aa9.51□□□□□ -0.89
PRKCH-208ENST00000553846 USP30Q70CQ3 517 aa9.51□□□□□ -0.89
PRKCH-208ENST00000553846 SPATS2Q86XZ4 545 aaKnown RBP9.51□□□□□ -0.89
PRKCH-208ENST00000553846 EID2Q8N6I1 236 aa9.51□□□□□ -0.89
PRKCH-208ENST00000553846 C12orf29Q8N999 325 aa9.51□□□□□ -0.89
PRKCH-208ENST00000553846 ZNF248Q8NDW4 579 aa9.51□□□□□ -0.89
PRKCH-208ENST00000553846 HPS3Q969F9 1004 aa9.51□□□□□ -0.89
PRKCH-208ENST00000553846 SYAP1Q96A49 352 aaPredicted RBP9.51□□□□□ -0.89
PRKCH-208ENST00000553846 MED8Q96G25 268 aa9.51□□□□□ -0.89
PRKCH-208ENST00000553846 TNIP3Q96KP6 325 aa9.51□□□□□ -0.89
PRKCH-208ENST00000553846 LMLNQ96KR4 655 aa9.51□□□□□ -0.89
PRKCH-208ENST00000553846 TWNKQ96RR1 684 aa9.51□□□□□ -0.89
PRKCH-208ENST00000553846 ACE2Q9BYF1 805 aaPredicted RBP9.51□□□□□ -0.89
PRKCH-208ENST00000553846 CIPCQ9C0C6 399 aa9.51□□□□□ -0.89
PRKCH-208ENST00000553846 RSPH9Q9H1X1 276 aaPredicted RBP9.51□□□□□ -0.89
PRKCH-208ENST00000553846 KIAA1586Q9HCI6 787 aa9.51□□□□□ -0.89
PRKCH-208ENST00000553846 CLIC5Q9NZA1 410 aa9.51□□□□□ -0.89
PRKCH-208ENST00000553846 STOML2Q9UJZ1 356 aa9.51□□□□□ -0.89
PRKCH-208ENST00000553846 CLCA2Q9UQC9 943 aa9.51□□□□□ -0.89
PRKCH-208ENST00000553846 ZNF510Q9Y2H8 683 aa9.51□□□□□ -0.89
PRKCH-208ENST00000553846 PCDHB1Q9Y5F3 818 aa9.51□□□□□ -0.89
PRKCH-208ENST00000553846 PCDHA5Q9Y5H7 936 aa9.51□□□□□ -0.89
PRKCH-208ENST00000553846 A0A1W2PNU3 283 aaPredicted RBP9.5□□□□□ -0.89
PRKCH-208ENST00000553846 EIF3DO15371 548 aaKnown RBP eCLIP9.5□□□□□ -0.89
PRKCH-208ENST00000553846 CKMT2P17540 419 aa9.5□□□□□ -0.89
PRKCH-208ENST00000553846 CORO1AP31146 461 aaKnown RBP9.5□□□□□ -0.89
PRKCH-208ENST00000553846 ASPAP45381 313 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms