RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 RAB21Q9UL25 225 aa16.77■□□□□ 0.28
ACTN1-209ENST00000553659 MYO18AQ92614 2054 aaKnown RBP16.77■□□□□ 0.27
ACTN1-209ENST00000553659 PTPRJQ12913 1337 aa16.76■□□□□ 0.27
ACTN1-209ENST00000553659 K7EQS6 105 aa16.76■□□□□ 0.27
ACTN1-209ENST00000553659 PHACTR2O75167 634 aa16.76■□□□□ 0.27
ACTN1-209ENST00000553659 PDGFRBP09619 1106 aa16.76■□□□□ 0.27
ACTN1-209ENST00000553659 PNMA6AP0CW24 399 aaPredicted RBP16.76■□□□□ 0.27
ACTN1-209ENST00000553659 CYP11B1P15538 503 aa16.76■□□□□ 0.27
ACTN1-209ENST00000553659 WARSP23381 471 aaKnown RBP16.76■□□□□ 0.27
ACTN1-209ENST00000553659 GBP1P32455 592 aa16.76■□□□□ 0.27
ACTN1-209ENST00000553659 OPRD1P41143 372 aa16.76■□□□□ 0.27
ACTN1-209ENST00000553659 PPP3CCP48454 512 aa16.76■□□□□ 0.27
ACTN1-209ENST00000553659 PSMC1P62191 440 aaKnown RBP16.76■□□□□ 0.27
ACTN1-209ENST00000553659 YWHAEP62258 255 aaKnown RBP16.76■□□□□ 0.27
ACTN1-209ENST00000553659 ZXDBP98169 803 aa16.76■□□□□ 0.27
ACTN1-209ENST00000553659 USP39Q53GS9 565 aaKnown RBP16.76■□□□□ 0.27
ACTN1-209ENST00000553659 TDRD10Q5VZ19 366 aaKnown RBP16.76■□□□□ 0.27
ACTN1-209ENST00000553659 TCEAL6Q6IPX3 200 aa16.76■□□□□ 0.27
ACTN1-209ENST00000553659 TRIM72Q6ZMU5 477 aa16.76■□□□□ 0.27
ACTN1-209ENST00000553659 C11orf74Q86VG3 221 aa16.76■□□□□ 0.27
ACTN1-209ENST00000553659 CREG2Q8IUH2 290 aa16.76■□□□□ 0.27
ACTN1-209ENST00000553659 MMGT1Q8N4V1 131 aa16.76■□□□□ 0.27
ACTN1-209ENST00000553659 KIAA1958Q8N8K9 716 aa16.76■□□□□ 0.27
ACTN1-209ENST00000553659 TSTD1Q8NFU3 115 aa16.76■□□□□ 0.27
ACTN1-209ENST00000553659 OLIG1Q8TAK6 271 aa16.76■□□□□ 0.27
ACTN1-209ENST00000553659 HNRNPLLQ8WVV9 542 aaKnown RBP16.76■□□□□ 0.27
ACTN1-209ENST00000553659 TCEAL3Q969E4 200 aa16.76■□□□□ 0.27
ACTN1-209ENST00000553659 SELENOOQ9BVL4 669 aa16.76■□□□□ 0.27
ACTN1-209ENST00000553659 TRPM5Q9NZQ8 1165 aa16.76■□□□□ 0.27
ACTN1-209ENST00000553659 NOCTQ9UK39 431 aaKnown RBP16.76■□□□□ 0.27
ACTN1-209ENST00000553659 LEFTY2O00292 366 aa16.75■□□□□ 0.27
ACTN1-209ENST00000553659 TRIM66O15016 1216 aa16.75■□□□□ 0.27
ACTN1-209ENST00000553659 USP46P62068 366 aa16.75■□□□□ 0.27
ACTN1-209ENST00000553659 GLE1Q53GS7 698 aaKnown RBP16.75■□□□□ 0.27
ACTN1-209ENST00000553659 C2orf27AQ580R0 203 aa16.75■□□□□ 0.27
ACTN1-209ENST00000553659 WDR93Q6P2C0 686 aa16.75■□□□□ 0.27
ACTN1-209ENST00000553659 RASSF3Q86WH2 238 aa16.75■□□□□ 0.27
ACTN1-209ENST00000553659 ADGRG2Q8IZP9 1017 aa16.75■□□□□ 0.27
ACTN1-209ENST00000553659 LRRC57Q8N9N7 239 aa16.75■□□□□ 0.27
ACTN1-209ENST00000553659 MYCBPAPQ8TBZ2 947 aa16.75■□□□□ 0.27
ACTN1-209ENST00000553659 ZNF516Q92618 1163 aa16.75■□□□□ 0.27
ACTN1-209ENST00000553659 PCED1BQ96HM7 432 aa16.75■□□□□ 0.27
ACTN1-209ENST00000553659 CAPZA3Q96KX2 299 aa16.75■□□□□ 0.27
ACTN1-209ENST00000553659 MMS19Q96T76 1030 aa16.75■□□□□ 0.27
ACTN1-209ENST00000553659 EDEM2Q9BV94 578 aa16.75■□□□□ 0.27
ACTN1-209ENST00000553659 TTLL2Q9BWV7 592 aa16.75■□□□□ 0.27
ACTN1-209ENST00000553659 PARD6BQ9BYG5 372 aa16.75■□□□□ 0.27
ACTN1-209ENST00000553659 INVSQ9Y283 1065 aa16.75■□□□□ 0.27
ACTN1-209ENST00000553659 CEP192Q8TEP8 1941 aa16.74■□□□□ 0.27
ACTN1-209ENST00000553659 ZNF840PA6NDX5 716 aa16.74■□□□□ 0.27
ACTN1-209ENST00000553659 CYP26A1O43174 497 aa16.74■□□□□ 0.27
ACTN1-209ENST00000553659 SRGAP2O75044 1071 aa16.74■□□□□ 0.27
ACTN1-209ENST00000553659 MTA2O94776 668 aa16.74■□□□□ 0.27
ACTN1-209ENST00000553659 FAM163BP0C2L3 166 aa16.74■□□□□ 0.27
ACTN1-209ENST00000553659 MYBL1P10243 752 aa16.74■□□□□ 0.27
ACTN1-209ENST00000553659 GNL1P36915 607 aaPredicted RBP16.74■□□□□ 0.27
ACTN1-209ENST00000553659 PI4KAP42356 2102 aa16.74■□□□□ 0.27
ACTN1-209ENST00000553659 CLCN6P51797 869 aa16.74■□□□□ 0.27
ACTN1-209ENST00000553659 SEC13P55735 322 aa16.74■□□□□ 0.27
ACTN1-209ENST00000553659 NOP14P78316 857 aaKnown RBP16.74■□□□□ 0.27
ACTN1-209ENST00000553659 SLC7A9P82251 487 aa16.74■□□□□ 0.27
ACTN1-209ENST00000553659 CUL2Q13617 745 aa16.74■□□□□ 0.27
ACTN1-209ENST00000553659 NCOA4Q13772 614 aa16.74■□□□□ 0.27
ACTN1-209ENST00000553659 SGSM1Q2NKQ1 1148 aa16.74■□□□□ 0.27
ACTN1-209ENST00000553659 GAB4Q2WGN9 574 aa16.74■□□□□ 0.27
ACTN1-209ENST00000553659 MAP9Q49MG5 647 aa16.74■□□□□ 0.27
ACTN1-209ENST00000553659 PMS2CLQ68D20 193 aa16.74■□□□□ 0.27
ACTN1-209ENST00000553659 PEX26Q7Z412 305 aa16.74■□□□□ 0.27
ACTN1-209ENST00000553659 NOP9Q86U38 636 aaKnown RBP16.74■□□□□ 0.27
ACTN1-209ENST00000553659 C8orf48Q96LL4 319 aa16.74■□□□□ 0.27
ACTN1-209ENST00000553659 RNF38Q9H0F5 515 aa16.74■□□□□ 0.27
ACTN1-209ENST00000553659 ARFGAP3Q9NP61 516 aa16.74■□□□□ 0.27
ACTN1-209ENST00000553659 UVRAGQ9P2Y5 699 aa16.74■□□□□ 0.27
ACTN1-209ENST00000553659 AMFRQ9UKV5 643 aa16.74■□□□□ 0.27
ACTN1-209ENST00000553659 MMP17Q9ULZ9 603 aa16.74■□□□□ 0.27
ACTN1-209ENST00000553659 CHD8Q9HCK8 2581 aa16.73■□□□□ 0.27
ACTN1-209ENST00000553659 PLXND1Q9Y4D7 1925 aa16.73■□□□□ 0.27
ACTN1-209ENST00000553659 C4orf47A7E2U8 309 aa16.73■□□□□ 0.27
ACTN1-209ENST00000553659 SLC9A3R1O14745 358 aaPredicted RBP16.73■□□□□ 0.27
ACTN1-209ENST00000553659 OLFM2O95897 454 aa16.73■□□□□ 0.27
ACTN1-209ENST00000553659 CST3P01034 146 aaPredicted RBP16.73■□□□□ 0.27
ACTN1-209ENST00000553659 KRT5P13647 590 aa16.73■□□□□ 0.27
ACTN1-209ENST00000553659 MRPS21P82921 87 aaKnown RBP16.73■□□□□ 0.27
ACTN1-209ENST00000553659 TRPC3Q13507 836 aa16.73■□□□□ 0.27
ACTN1-209ENST00000553659 CRY1Q16526 586 aa16.73■□□□□ 0.27
ACTN1-209ENST00000553659 PSAPL1Q6NUJ1 521 aa16.73■□□□□ 0.27
ACTN1-209ENST00000553659 C11orf63Q6NUN7 778 aa16.73■□□□□ 0.27
ACTN1-209ENST00000553659 CCDC33Q8N5R6 958 aa16.73■□□□□ 0.27
ACTN1-209ENST00000553659 SLC35G2Q8TBE7 412 aa16.73■□□□□ 0.27
ACTN1-209ENST00000553659 KAT5Q92993 513 aa16.73■□□□□ 0.27
ACTN1-209ENST00000553659 MRPL45Q9BRJ2 306 aaKnown RBP16.73■□□□□ 0.27
ACTN1-209ENST00000553659 TPSD1Q9BZJ3 242 aa16.73■□□□□ 0.27
ACTN1-209ENST00000553659 SNX25Q9H3E2 840 aa16.73■□□□□ 0.27
ACTN1-209ENST00000553659 FAM124BQ9H5Z6 455 aaPredicted RBP16.73■□□□□ 0.27
ACTN1-209ENST00000553659 ANKZF1Q9H8Y5 726 aa16.73■□□□□ 0.27
ACTN1-209ENST00000553659 CNTN6Q9UQ52 1028 aa16.73■□□□□ 0.27
ACTN1-209ENST00000553659 MYH10P35580 1976 aa16.73■□□□□ 0.27
ACTN1-209ENST00000553659 TNRC6BQ9UPQ9 1833 aaKnown RBP16.73■□□□□ 0.27
ACTN1-209ENST00000553659 LNP1A1A4G5 178 aa16.72■□□□□ 0.27
ACTN1-209ENST00000553659 ANTXRLA6NF34 631 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms