RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 ACSL4O60488 711 aa15.95■□□□□ 0.14
SHMT2-204ENST00000553324 GFPT2O94808 682 aa15.95■□□□□ 0.14
SHMT2-204ENST00000553324 APOEP02649 317 aa15.95■□□□□ 0.14
SHMT2-204ENST00000553324 ATP1A3P13637 1013 aa15.95■□□□□ 0.14
SHMT2-204ENST00000553324 SCNN1AP37088 669 aa15.95■□□□□ 0.14
SHMT2-204ENST00000553324 GABRB2P47870 512 aa15.95■□□□□ 0.14
SHMT2-204ENST00000553324 MESP2Q0VG99 397 aa15.95■□□□□ 0.14
SHMT2-204ENST00000553324 SIM2Q14190 667 aaPredicted RBP15.95■□□□□ 0.14
SHMT2-204ENST00000553324 PTPN20Q4JDL3 420 aa15.95■□□□□ 0.14
SHMT2-204ENST00000553324 EMC10Q5UCC4 262 aa15.95■□□□□ 0.14
SHMT2-204ENST00000553324 TRIM72Q6ZMU5 477 aa15.95■□□□□ 0.14
SHMT2-204ENST00000553324 SLC26A9Q7LBE3 791 aa15.95■□□□□ 0.14
SHMT2-204ENST00000553324 CACNA2D4Q7Z3S7 1137 aa15.95■□□□□ 0.14
SHMT2-204ENST00000553324 CCDC33Q8N5R6 958 aa15.95■□□□□ 0.14
SHMT2-204ENST00000553324 ALLCQ8N6M5 410 aa15.95■□□□□ 0.14
SHMT2-204ENST00000553324 ZNF397Q8NF99 534 aaPredicted RBP15.95■□□□□ 0.14
SHMT2-204ENST00000553324 UCMAQ8WVF2 138 aa15.95■□□□□ 0.14
SHMT2-204ENST00000553324 SLC39A13Q96H72 371 aa15.95■□□□□ 0.14
SHMT2-204ENST00000553324 SLC2A13Q96QE2 648 aa15.95■□□□□ 0.14
SHMT2-204ENST00000553324 RTN4Q9NQC3 1192 aaKnown RBP15.95■□□□□ 0.14
SHMT2-204ENST00000553324 GFRA2O00451 464 aa15.94■□□□□ 0.14
SHMT2-204ENST00000553324 KLF8O95600 359 aaPredicted RBP15.94■□□□□ 0.14
SHMT2-204ENST00000553324 TRUB2O95900 331 aaKnown RBP15.94■□□□□ 0.14
SHMT2-204ENST00000553324 ERBB2P04626 1255 aa15.94■□□□□ 0.14
SHMT2-204ENST00000553324 NTSR1P30989 418 aa15.94■□□□□ 0.14
SHMT2-204ENST00000553324 NOS2P35228 1153 aa15.94■□□□□ 0.14
SHMT2-204ENST00000553324 CDR2Q01850 454 aa15.94■□□□□ 0.14
SHMT2-204ENST00000553324 DMWDQ09019 674 aa15.94■□□□□ 0.14
SHMT2-204ENST00000553324 TAF3Q5VWG9 929 aa15.94■□□□□ 0.14
SHMT2-204ENST00000553324 OLFML1Q6UWY5 402 aa15.94■□□□□ 0.14
SHMT2-204ENST00000553324 FAM183BPQ6ZVS7 135 aa15.94■□□□□ 0.14
SHMT2-204ENST00000553324 CEP68Q76N32 757 aa15.94■□□□□ 0.14
SHMT2-204ENST00000553324 NOP9Q86U38 636 aaKnown RBP15.94■□□□□ 0.14
SHMT2-204ENST00000553324 CCDC117Q8IWD4 279 aaPredicted RBP15.94■□□□□ 0.14
SHMT2-204ENST00000553324 SFTPA1Q8IWL2 248 aa15.94■□□□□ 0.14
SHMT2-204ENST00000553324 DEFB106AQ8N104 65 aa15.94■□□□□ 0.14
SHMT2-204ENST00000553324 GPR161Q8N6U8 529 aaKnown RBP15.94■□□□□ 0.14
SHMT2-204ENST00000553324 GAB3Q8WWW8 586 aa15.94■□□□□ 0.14
SHMT2-204ENST00000553324 BTN2A3PQ96KV6 586 aa15.94■□□□□ 0.14
SHMT2-204ENST00000553324 FCRL2Q96LA5 508 aaPredicted RBP15.94■□□□□ 0.14
SHMT2-204ENST00000553324 HHIPQ96QV1 700 aa15.94■□□□□ 0.14
SHMT2-204ENST00000553324 SMG5Q9UPR3 1016 aaKnown RBP15.94■□□□□ 0.14
SHMT2-204ENST00000553324 PRRT4C9JH25 899 aa15.93■□□□□ 0.14
SHMT2-204ENST00000553324 TRIM24O15164 1050 aa15.93■□□□□ 0.14
SHMT2-204ENST00000553324 TSPAN3O60637 253 aa15.93■□□□□ 0.14
SHMT2-204ENST00000553324 RPP40O75818 363 aaKnown RBP15.93■□□□□ 0.14
SHMT2-204ENST00000553324 IGLV3-25P01717 112 aa15.93■□□□□ 0.14
SHMT2-204ENST00000553324 MMEP08473 750 aa15.93■□□□□ 0.14
SHMT2-204ENST00000553324 HNRNPLP14866 589 aaKnown RBP eCLIP15.93■□□□□ 0.14
SHMT2-204ENST00000553324 ABCB4P21439 1286 aa15.93■□□□□ 0.14
SHMT2-204ENST00000553324 CCR1P32246 355 aa15.93■□□□□ 0.14
SHMT2-204ENST00000553324 MATKP42679 507 aa15.93■□□□□ 0.14
SHMT2-204ENST00000553324 EIF4EBP2Q13542 120 aaPredicted RBP15.93■□□□□ 0.14
SHMT2-204ENST00000553324 IQCB1Q15051 598 aa15.93■□□□□ 0.14
SHMT2-204ENST00000553324 EIF4HQ15056 248 aaKnown RBP15.93■□□□□ 0.14
SHMT2-204ENST00000553324 TAF5Q15542 800 aa15.93■□□□□ 0.14
SHMT2-204ENST00000553324 USP39Q53GS9 565 aaKnown RBP15.93■□□□□ 0.14
SHMT2-204ENST00000553324 PIK3R6Q5UE93 754 aa15.93■□□□□ 0.14
SHMT2-204ENST00000553324 PRR23BQ6ZRT6 265 aa15.93■□□□□ 0.14
SHMT2-204ENST00000553324 ANKS1BQ7Z6G8 1248 aa15.93■□□□□ 0.14
SHMT2-204ENST00000553324 TAC4Q86UU9 113 aa15.93■□□□□ 0.14
SHMT2-204ENST00000553324 C11orf74Q86VG3 221 aa15.93■□□□□ 0.14
SHMT2-204ENST00000553324 CHPFQ8IZ52 775 aa15.93■□□□□ 0.14
SHMT2-204ENST00000553324 ATP6V0D2Q8N8Y2 350 aa15.93■□□□□ 0.14
SHMT2-204ENST00000553324 ADAM32Q8TC27 787 aa15.93■□□□□ 0.14
SHMT2-204ENST00000553324 RNF34Q969K3 372 aa15.93■□□□□ 0.14
SHMT2-204ENST00000553324 PIWIL1Q96J94 861 aaKnown RBP15.93■□□□□ 0.14
SHMT2-204ENST00000553324 HINFPQ9BQA5 517 aa15.93■□□□□ 0.14
SHMT2-204ENST00000553324 TJP2Q9UDY2 1190 aa15.93■□□□□ 0.14
SHMT2-204ENST00000553324 GMEB2Q9UKD1 530 aa15.93■□□□□ 0.14
SHMT2-204ENST00000553324 MYO6Q9UM54 1294 aa15.93■□□□□ 0.14
SHMT2-204ENST00000553324 PAXBP1Q9Y5B6 917 aa15.93■□□□□ 0.14
SHMT2-204ENST00000553324 SGK1O00141 431 aa15.92■□□□□ 0.14
SHMT2-204ENST00000553324 EPHB6O15197 1021 aa15.92■□□□□ 0.14
SHMT2-204ENST00000553324 F9P00740 461 aa15.92■□□□□ 0.14
SHMT2-204ENST00000553324 SERPINC1P01008 464 aa15.92■□□□□ 0.14
SHMT2-204ENST00000553324 CHRM1P11229 460 aaPredicted RBP15.92■□□□□ 0.14
SHMT2-204ENST00000553324 HOXD9P28356 352 aaPredicted RBP15.92■□□□□ 0.14
SHMT2-204ENST00000553324 PXNP49023 591 aaPredicted RBP15.92■□□□□ 0.14
SHMT2-204ENST00000553324 ARID5AQ03989 594 aa15.92■□□□□ 0.14
SHMT2-204ENST00000553324 BYSLQ13895 437 aaKnown RBP15.92■□□□□ 0.14
SHMT2-204ENST00000553324 FAM133BQ5BKY9 247 aaKnown RBP15.92■□□□□ 0.14
SHMT2-204ENST00000553324 ZC3H12AQ5D1E8 599 aaKnown RBP15.92■□□□□ 0.14
SHMT2-204ENST00000553324 LAIR1Q6GTX8 287 aa15.92■□□□□ 0.14
SHMT2-204ENST00000553324 ARCQ7LC44 396 aa15.92■□□□□ 0.14
SHMT2-204ENST00000553324 RASSF3Q86WH2 238 aa15.92■□□□□ 0.14
SHMT2-204ENST00000553324 WFIKKN2Q8TEU8 576 aa15.92■□□□□ 0.14
SHMT2-204ENST00000553324 FAM204AQ9H8W3 233 aa15.92■□□□□ 0.14
SHMT2-204ENST00000553324 DDIT4Q9NX09 232 aa15.92■□□□□ 0.14
SHMT2-204ENST00000553324 ELOVL2Q9NXB9 296 aa15.92■□□□□ 0.14
SHMT2-204ENST00000553324 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.92■□□□□ 0.14
SHMT2-204ENST00000553324 NCDNQ9UBB6 729 aa15.92■□□□□ 0.14
SHMT2-204ENST00000553324 NOCTQ9UK39 431 aaKnown RBP15.92■□□□□ 0.14
SHMT2-204ENST00000553324 STAP1Q9ULZ2 295 aa15.92■□□□□ 0.14
SHMT2-204ENST00000553324 A0A1W2PQC6 194 aa15.91■□□□□ 0.14
SHMT2-204ENST00000553324 KCNU1A8MYU2 1149 aa15.91■□□□□ 0.14
SHMT2-204ENST00000553324 GOLGA6L19H0YKK7 550 aa15.91■□□□□ 0.14
SHMT2-204ENST00000553324 TBL1XO60907 577 aa15.91■□□□□ 0.14
SHMT2-204ENST00000553324 ADAM23O75077 832 aa15.91■□□□□ 0.14
SHMT2-204ENST00000553324 DAB1O75553 588 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms