RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 TTC30AQ86WT1 665 aa11.91□□□□□ -0.5
TMEM116-218ENST00000552839 TTC16Q8NEE8 873 aa11.91□□□□□ -0.5
TMEM116-218ENST00000552839 USP33Q8TEY7 942 aa11.91□□□□□ -0.5
TMEM116-218ENST00000552839 PIGKQ92643 395 aa11.91□□□□□ -0.5
TMEM116-218ENST00000552839 ATP2A3Q93084 1043 aa11.91□□□□□ -0.5
TMEM116-218ENST00000552839 SPATA17Q96L03 361 aa11.91□□□□□ -0.5
TMEM116-218ENST00000552839 CEP295NLQ96MC4 621 aa11.91□□□□□ -0.5
TMEM116-218ENST00000552839 SLC22A12Q96S37 553 aa11.91□□□□□ -0.5
TMEM116-218ENST00000552839 DNAJC7Q99615 494 aa11.91□□□□□ -0.5
TMEM116-218ENST00000552839 SMOQ99835 787 aa11.91□□□□□ -0.5
TMEM116-218ENST00000552839 NACA2Q9H009 215 aa11.91□□□□□ -0.5
TMEM116-218ENST00000552839 PNPLA8Q9NP80 782 aa11.91□□□□□ -0.5
TMEM116-218ENST00000552839 NOCTQ9UK39 431 aaKnown RBP11.91□□□□□ -0.5
TMEM116-218ENST00000552839 MYO18AQ92614 2054 aaKnown RBP11.91□□□□□ -0.5
TMEM116-218ENST00000552839 TMCO5BA8MYB1 307 aa11.9□□□□□ -0.5
TMEM116-218ENST00000552839 K7EQS6 105 aa11.9□□□□□ -0.5
TMEM116-218ENST00000552839 PIK3R2O00459 728 aa11.9□□□□□ -0.5
TMEM116-218ENST00000552839 SART1O43290 800 aaKnown RBP11.9□□□□□ -0.5
TMEM116-218ENST00000552839 FBXO21O94952 628 aa11.9□□□□□ -0.5
TMEM116-218ENST00000552839 IGF2RP11717 2491 aa11.9□□□□□ -0.5
TMEM116-218ENST00000552839 DESP17661 470 aa11.9□□□□□ -0.5
TMEM116-218ENST00000552839 YWHAQP27348 245 aa11.9□□□□□ -0.5
TMEM116-218ENST00000552839 PRKCIP41743 596 aa11.9□□□□□ -0.5
TMEM116-218ENST00000552839 PLA2G4AP47712 749 aa11.9□□□□□ -0.5
TMEM116-218ENST00000552839 IFNAR2P48551 515 aa11.9□□□□□ -0.5
TMEM116-218ENST00000552839 TKTL1P51854 596 aa11.9□□□□□ -0.5
TMEM116-218ENST00000552839 ADIGQ0VDE8 80 aa11.9□□□□□ -0.5
TMEM116-218ENST00000552839 TBX2Q13207 712 aaPredicted RBP11.9□□□□□ -0.5
TMEM116-218ENST00000552839 PDCLQ13371 301 aa11.9□□□□□ -0.5
TMEM116-218ENST00000552839 C2orf27AQ580R0 203 aa11.9□□□□□ -0.5
TMEM116-218ENST00000552839 TOGARAM2Q6ZUX3 1019 aa11.9□□□□□ -0.5
TMEM116-218ENST00000552839 PAQR9Q6ZVX9 377 aa11.9□□□□□ -0.5
TMEM116-218ENST00000552839 ERICH1Q86X53 443 aa11.9□□□□□ -0.5
TMEM116-218ENST00000552839 PDZD8Q8NEN9 1154 aa11.9□□□□□ -0.5
TMEM116-218ENST00000552839 MDGA1Q8NFP4 955 aa11.9□□□□□ -0.5
TMEM116-218ENST00000552839 TRIM11Q96F44 468 aa11.9□□□□□ -0.5
TMEM116-218ENST00000552839 PPP1R13BQ96KQ4 1090 aa11.9□□□□□ -0.5
TMEM116-218ENST00000552839 HSFY1Q96LI6 401 aa11.9□□□□□ -0.5
TMEM116-218ENST00000552839 PANX2Q96RD6 677 aa11.9□□□□□ -0.5
TMEM116-218ENST00000552839 KCNK16Q96T55 309 aa11.9□□□□□ -0.5
TMEM116-218ENST00000552839 LINC00597Q9H2U6 94 aa11.9□□□□□ -0.5
TMEM116-218ENST00000552839 TRPC7Q9HCX4 862 aa11.9□□□□□ -0.5
TMEM116-218ENST00000552839 EVLQ9UI08 416 aaPredicted RBP11.9□□□□□ -0.5
TMEM116-218ENST00000552839 KLK13Q9UKR3 277 aa11.9□□□□□ -0.5
TMEM116-218ENST00000552839 MSRB2Q9Y3D2 182 aa11.9□□□□□ -0.5
TMEM116-218ENST00000552839 NEUROG3Q9Y4Z2 214 aa11.9□□□□□ -0.5
TMEM116-218ENST00000552839 ANKRD62A6NC57 917 aa11.89□□□□□ -0.51
TMEM116-218ENST00000552839 CALB1P05937 261 aa11.89□□□□□ -0.51
TMEM116-218ENST00000552839 USP17L7P0C7H9 530 aa11.89□□□□□ -0.51
TMEM116-218ENST00000552839 HNRNPLP14866 589 aaKnown RBP eCLIP11.89□□□□□ -0.51
TMEM116-218ENST00000552839 EIF4A3P38919 411 aaKnown RBP11.89□□□□□ -0.51
TMEM116-218ENST00000552839 OPRD1P41143 372 aa11.89□□□□□ -0.51
TMEM116-218ENST00000552839 CACNA2D1P54289 1103 aa11.89□□□□□ -0.51
TMEM116-218ENST00000552839 SEC13P55735 322 aa11.89□□□□□ -0.51
TMEM116-218ENST00000552839 FMO1Q01740 532 aa11.89□□□□□ -0.51
TMEM116-218ENST00000552839 CCDC173Q0VFZ6 552 aa11.89□□□□□ -0.51
TMEM116-218ENST00000552839 NR1H3Q13133 447 aa11.89□□□□□ -0.51
TMEM116-218ENST00000552839 SPA17Q15506 151 aa11.89□□□□□ -0.51
TMEM116-218ENST00000552839 CLEC16AQ2KHT3 1053 aa11.89□□□□□ -0.51
TMEM116-218ENST00000552839 TRIM61Q5EBN2 209 aa11.89□□□□□ -0.51
TMEM116-218ENST00000552839 E4F1Q66K89 784 aaPredicted RBP11.89□□□□□ -0.51
TMEM116-218ENST00000552839 OR6B2Q6IFH4 312 aa11.89□□□□□ -0.51
TMEM116-218ENST00000552839 TMEM92Q6UXU6 159 aa11.89□□□□□ -0.51
TMEM116-218ENST00000552839 RSRC2Q7L4I2 434 aaKnown RBP11.89□□□□□ -0.51
TMEM116-218ENST00000552839 CCDC186Q7Z3E2 898 aa11.89□□□□□ -0.51
TMEM116-218ENST00000552839 ZNF571Q7Z3V5 609 aaPredicted RBP11.89□□□□□ -0.51
TMEM116-218ENST00000552839 IRF2BP2Q7Z5L9 587 aa11.89□□□□□ -0.51
TMEM116-218ENST00000552839 TMTC1Q8IUR5 882 aa11.89□□□□□ -0.51
TMEM116-218ENST00000552839 ARHGAP18Q8N392 663 aa11.89□□□□□ -0.51
TMEM116-218ENST00000552839 CCDC33Q8N5R6 958 aa11.89□□□□□ -0.51
TMEM116-218ENST00000552839 FRMD1Q8N878 549 aa11.89□□□□□ -0.51
TMEM116-218ENST00000552839 ARL14EPQ8N8R7 260 aaPredicted RBP11.89□□□□□ -0.51
TMEM116-218ENST00000552839 TC2NQ8N9U0 490 aa11.89□□□□□ -0.51
TMEM116-218ENST00000552839 CCDC112Q8NEF3 446 aa11.89□□□□□ -0.51
TMEM116-218ENST00000552839 OLIG1Q8TAK6 271 aa11.89□□□□□ -0.51
TMEM116-218ENST00000552839 SH3RF2Q8TEC5 729 aa11.89□□□□□ -0.51
TMEM116-218ENST00000552839 RLN3Q8WXF3 142 aa11.89□□□□□ -0.51
TMEM116-218ENST00000552839 CPA5Q8WXQ8 436 aa11.89□□□□□ -0.51
TMEM116-218ENST00000552839 FAM149B1Q96BN6 582 aa11.89□□□□□ -0.51
TMEM116-218ENST00000552839 BAG1Q99933 345 aaPredicted RBP11.89□□□□□ -0.51
TMEM116-218ENST00000552839 C11orf70Q9BRQ4 267 aa11.89□□□□□ -0.51
TMEM116-218ENST00000552839 TRIM62Q9BVG3 475 aa11.89□□□□□ -0.51
TMEM116-218ENST00000552839 LHX5Q9H2C1 402 aa11.89□□□□□ -0.51
TMEM116-218ENST00000552839 SLC32A1Q9H598 525 aa11.89□□□□□ -0.51
TMEM116-218ENST00000552839 CSNK1G1Q9HCP0 422 aa11.89□□□□□ -0.51
TMEM116-218ENST00000552839 TMEM74BQ9NUR3 256 aa11.89□□□□□ -0.51
TMEM116-218ENST00000552839 COMMD8Q9NX08 183 aa11.89□□□□□ -0.51
TMEM116-218ENST00000552839 TRPM5Q9NZQ8 1165 aa11.89□□□□□ -0.51
TMEM116-218ENST00000552839 STRIP2Q9ULQ0 834 aa11.89□□□□□ -0.51
TMEM116-218ENST00000552839 MMP17Q9ULZ9 603 aa11.89□□□□□ -0.51
TMEM116-218ENST00000552839 CEP295Q9C0D2 2601 aa11.89□□□□□ -0.51
TMEM116-218ENST00000552839 WDFY3Q8IZQ1 3526 aa11.88□□□□□ -0.51
TMEM116-218ENST00000552839 TRAV19A0A0A6YYK7 116 aa11.88□□□□□ -0.51
TMEM116-218ENST00000552839 SPAARA0A1B0GVQ0 90 aa11.88□□□□□ -0.51
TMEM116-218ENST00000552839 SSU72P8A0A1W2PR75 194 aa11.88□□□□□ -0.51
TMEM116-218ENST00000552839 C2orf78A6NCI8 922 aa11.88□□□□□ -0.51
TMEM116-218ENST00000552839 E5RJQ4 531 aa11.88□□□□□ -0.51
TMEM116-218ENST00000552839 GOLGA8SH3BPF8 625 aa11.88□□□□□ -0.51
TMEM116-218ENST00000552839 TAF4O00268 1085 aa11.88□□□□□ -0.51
TMEM116-218ENST00000552839 CAPN9O14815 690 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms