RNA–Protein interactions for RNA: ENST00000551931.5

LETMD1-231, Transcript of LETM1 domain containing 1, human

TSL 3

Gene LETMD1, Length 705 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LETMD1-231	ENST00000551931	CIPC	Q9C0C6	399 aa		13.18	□□□□□ -0.3
LETMD1-231	ENST00000551931	EIF2B4	Q9UI10	523 aa	Known RBP	13.18	□□□□□ -0.3
LETMD1-231	ENST00000551931	PCOLCE2	Q9UKZ9	415 aa		13.18	□□□□□ -0.3
LETMD1-231	ENST00000551931	FNDC3A	Q9Y2H6	1198 aa	Known RBP	13.18	□□□□□ -0.3
LETMD1-231	ENST00000551931	URB1	O60287	2271 aa	Known RBP	13.18	□□□□□ -0.3
LETMD1-231	ENST00000551931	DOCK9	Q9BZ29	2069 aa		13.17	□□□□□ -0.3
LETMD1-231	ENST00000551931	MYLK	Q15746	1914 aa		13.17	□□□□□ -0.3
LETMD1-231	ENST00000551931	SLC12A8	A0AV02	714 aa		13.17	□□□□□ -0.3
LETMD1-231	ENST00000551931	TULP2	O00295	520 aa		13.17	□□□□□ -0.3
LETMD1-231	ENST00000551931	BCAT2	O15382	392 aa	Predicted RBP	13.17	□□□□□ -0.3
LETMD1-231	ENST00000551931	RHOBTB3	O94955	611 aa		13.17	□□□□□ -0.3
LETMD1-231	ENST00000551931	MYL1	P05976	194 aa		13.17	□□□□□ -0.3
LETMD1-231	ENST00000551931	EPHX1	P07099	455 aa		13.17	□□□□□ -0.3
LETMD1-231	ENST00000551931	KRT13	P13646	458 aa		13.17	□□□□□ -0.3
LETMD1-231	ENST00000551931	HLA-E	P13747	358 aa		13.17	□□□□□ -0.3
LETMD1-231	ENST00000551931	YWHAG	P61981	247 aa	Known RBP eCLIP	13.17	□□□□□ -0.3
LETMD1-231	ENST00000551931	EIF4H	Q15056	248 aa	Known RBP	13.17	□□□□□ -0.3
LETMD1-231	ENST00000551931	RSRC2	Q7L4I2	434 aa	Known RBP	13.17	□□□□□ -0.3
LETMD1-231	ENST00000551931	GLRX5	Q86SX6	157 aa		13.17	□□□□□ -0.3
LETMD1-231	ENST00000551931	FAM124A	Q86V42	546 aa		13.17	□□□□□ -0.3
LETMD1-231	ENST00000551931	DDI1	Q8WTU0	396 aa		13.17	□□□□□ -0.3
LETMD1-231	ENST00000551931	GAREM1	Q9H706	876 aa		13.17	□□□□□ -0.3
LETMD1-231	ENST00000551931	TMEM8A	Q9HCN3	771 aa		13.17	□□□□□ -0.3
LETMD1-231	ENST00000551931	CISH	Q9NSE2	258 aa		13.17	□□□□□ -0.3
LETMD1-231	ENST00000551931	USP25	Q9UHP3	1055 aa		13.17	□□□□□ -0.3
LETMD1-231	ENST00000551931	KNTC1	P50748	2209 aa		13.17	□□□□□ -0.3
LETMD1-231	ENST00000551931	CYBB	P04839	570 aa		13.16	□□□□□ -0.3
LETMD1-231	ENST00000551931	CMA1	P23946	247 aa		13.16	□□□□□ -0.3
LETMD1-231	ENST00000551931	HOXD9	P28356	352 aa	Predicted RBP	13.16	□□□□□ -0.3
LETMD1-231	ENST00000551931	OXTR	P30559	389 aa		13.16	□□□□□ -0.3
LETMD1-231	ENST00000551931	PSMC2	P35998	433 aa	Known RBP	13.16	□□□□□ -0.3
LETMD1-231	ENST00000551931	MATK	P42679	507 aa		13.16	□□□□□ -0.3
LETMD1-231	ENST00000551931	TKTL1	P51854	596 aa		13.16	□□□□□ -0.3
LETMD1-231	ENST00000551931	ENPEP	Q07075	957 aa		13.16	□□□□□ -0.3
LETMD1-231	ENST00000551931	HLA-B	Q31612	363 aa		13.16	□□□□□ -0.3
LETMD1-231	ENST00000551931	ZCWPW2	Q504Y3	356 aa		13.16	□□□□□ -0.3
LETMD1-231	ENST00000551931	ARHGAP17	Q68EM7	881 aa		13.16	□□□□□ -0.3
LETMD1-231	ENST00000551931	KRT39	Q6A163	491 aa		13.16	□□□□□ -0.3
LETMD1-231	ENST00000551931	SERPINA13P	Q6UXR4	307 aa		13.16	□□□□□ -0.3
LETMD1-231	ENST00000551931	CCNI2	Q6ZMN8	369 aa	Predicted RBP	13.16	□□□□□ -0.3
LETMD1-231	ENST00000551931	ARHGAP18	Q8N392	663 aa		13.16	□□□□□ -0.3
LETMD1-231	ENST00000551931	ZNF366	Q8N895	744 aa		13.16	□□□□□ -0.3
LETMD1-231	ENST00000551931	CCDC150	Q8NCX0	1101 aa		13.16	□□□□□ -0.3
LETMD1-231	ENST00000551931	BAHD1	Q8TBE0	780 aa	Predicted RBP	13.16	□□□□□ -0.3
LETMD1-231	ENST00000551931	SETD7	Q8WTS6	366 aa	Known RBP	13.16	□□□□□ -0.3
LETMD1-231	ENST00000551931	EEF2KMT	Q96G04	330 aa		13.16	□□□□□ -0.3
LETMD1-231	ENST00000551931	TMEM176A	Q96HP8	235 aa		13.16	□□□□□ -0.3
LETMD1-231	ENST00000551931	NUP58	Q9BVL2	599 aa		13.16	□□□□□ -0.3
LETMD1-231	ENST00000551931	SLC2A11	Q9BYW1	496 aa		13.16	□□□□□ -0.3
LETMD1-231	ENST00000551931	ULBP1	Q9BZM6	244 aa		13.16	□□□□□ -0.3
LETMD1-231	ENST00000551931	UBXN6	Q9BZV1	441 aa		13.16	□□□□□ -0.3
LETMD1-231	ENST00000551931	TM7SF3	Q9NS93	570 aa		13.16	□□□□□ -0.3
LETMD1-231	ENST00000551931	TOR4A	Q9NXH8	423 aa		13.16	□□□□□ -0.3
LETMD1-231	ENST00000551931	STRIP2	Q9ULQ0	834 aa		13.16	□□□□□ -0.3
LETMD1-231	ENST00000551931	APOBEC2	Q9Y235	224 aa	Known RBP	13.16	□□□□□ -0.3
LETMD1-231	ENST00000551931	GPSM3	Q9Y4H4	160 aa		13.16	□□□□□ -0.3
LETMD1-231	ENST00000551931	SHROOM3	Q8TF72	1996 aa		13.15	□□□□□ -0.3
LETMD1-231	ENST00000551931		A0A1B0GVT2	93 aa		13.15	□□□□□ -0.3
LETMD1-231	ENST00000551931	TSPAN3	O60637	253 aa		13.15	□□□□□ -0.3
LETMD1-231	ENST00000551931	CER1	O95813	267 aa		13.15	□□□□□ -0.3
LETMD1-231	ENST00000551931	ZBED1	O96006	694 aa		13.15	□□□□□ -0.3
LETMD1-231	ENST00000551931	HSP90AA1	P07900	732 aa	Known RBP	13.15	□□□□□ -0.3
LETMD1-231	ENST00000551931	ZNF883	P0CG24	379 aa		13.15	□□□□□ -0.3
LETMD1-231	ENST00000551931	ACADM	P11310	421 aa		13.15	□□□□□ -0.3
LETMD1-231	ENST00000551931	HLA-F	P30511	346 aa		13.15	□□□□□ -0.3
LETMD1-231	ENST00000551931	ACSL1	P33121	698 aa		13.15	□□□□□ -0.3
LETMD1-231	ENST00000551931	MXI1	P50539	228 aa		13.15	□□□□□ -0.3
LETMD1-231	ENST00000551931	NDUFA8	P51970	172 aa		13.15	□□□□□ -0.3
LETMD1-231	ENST00000551931	MCCD1	P59942	119 aa	Predicted RBP	13.15	□□□□□ -0.3
LETMD1-231	ENST00000551931	DPYD	Q12882	1025 aa		13.15	□□□□□ -0.3
LETMD1-231	ENST00000551931	ADAM9	Q13443	819 aa		13.15	□□□□□ -0.3
LETMD1-231	ENST00000551931	CAMK2G	Q13555	558 aa	Predicted RBP	13.15	□□□□□ -0.3
LETMD1-231	ENST00000551931	TRIP4	Q15650	581 aa	Predicted RBP	13.15	□□□□□ -0.3
LETMD1-231	ENST00000551931	PM20D1	Q6GTS8	502 aa		13.15	□□□□□ -0.3
LETMD1-231	ENST00000551931	C19orf48	Q6RUI8	117 aa		13.15	□□□□□ -0.3
LETMD1-231	ENST00000551931	FMNL3	Q8IVF7	1028 aa		13.15	□□□□□ -0.3
LETMD1-231	ENST00000551931	GUF1	Q8N442	669 aa	Known RBP	13.15	□□□□□ -0.3
LETMD1-231	ENST00000551931	ANKRD52	Q8NB46	1076 aa		13.15	□□□□□ -0.3
LETMD1-231	ENST00000551931	OR2T3	Q8NH03	318 aa		13.15	□□□□□ -0.3
LETMD1-231	ENST00000551931	MDM1	Q8TC05	714 aa		13.15	□□□□□ -0.3
LETMD1-231	ENST00000551931	CYB5D2	Q8WUJ1	264 aa		13.15	□□□□□ -0.3
LETMD1-231	ENST00000551931	TATDN2	Q93075	761 aa		13.15	□□□□□ -0.3
LETMD1-231	ENST00000551931	PLD4	Q96BZ4	506 aa		13.15	□□□□□ -0.3
LETMD1-231	ENST00000551931	DNAI2	Q9GZS0	605 aa		13.15	□□□□□ -0.3
LETMD1-231	ENST00000551931	C6orf106	Q9H6K1	298 aa	Predicted RBP	13.15	□□□□□ -0.3
LETMD1-231	ENST00000551931	FAM237A	A0A1B0GTK4	181 aa		13.14	□□□□□ -0.31
LETMD1-231	ENST00000551931	ATXN1L	P0C7T5	689 aa	Known RBP	13.14	□□□□□ -0.31
LETMD1-231	ENST00000551931	RPL13	P26373	211 aa	Known RBP	13.14	□□□□□ -0.31
LETMD1-231	ENST00000551931	GTF2H1	P32780	548 aa		13.14	□□□□□ -0.31
LETMD1-231	ENST00000551931	SYK	P43405	635 aa		13.14	□□□□□ -0.31
LETMD1-231	ENST00000551931	CSNK1E	P49674	416 aa	Known RBP	13.14	□□□□□ -0.31
LETMD1-231	ENST00000551931	SGSH	P51688	502 aa		13.14	□□□□□ -0.31
LETMD1-231	ENST00000551931	PDE4C	Q08493	712 aa		13.14	□□□□□ -0.31
LETMD1-231	ENST00000551931	ACAP1	Q15027	740 aa		13.14	□□□□□ -0.31
LETMD1-231	ENST00000551931	GOLGA7B	Q2TAP0	167 aa		13.14	□□□□□ -0.31
LETMD1-231	ENST00000551931	MPPE1	Q53F39	396 aa		13.14	□□□□□ -0.31
LETMD1-231	ENST00000551931	LAYN	Q6UX15	382 aa		13.14	□□□□□ -0.31
LETMD1-231	ENST00000551931	DBX2	Q6ZNG2	339 aa		13.14	□□□□□ -0.31
LETMD1-231	ENST00000551931	MARCH9	Q86YJ5	346 aa		13.14	□□□□□ -0.31
LETMD1-231	ENST00000551931	HSCB	Q8IWL3	235 aa		13.14	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms