RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 CDK17Q00537 523 aa18.04■□□□□ 0.48
CDK4-208ENST00000551706 CENPCQ03188 943 aa18.04■□□□□ 0.48
CDK4-208ENST00000551706 TRIM14Q14142 442 aa18.04■□□□□ 0.48
CDK4-208ENST00000551706 PON2Q15165 354 aa18.04■□□□□ 0.48
CDK4-208ENST00000551706 TAF5Q15542 800 aa18.04■□□□□ 0.48
CDK4-208ENST00000551706 PREPLQ4J6C6 727 aaPredicted RBP18.04■□□□□ 0.48
CDK4-208ENST00000551706 TMEM196Q5HYL7 178 aa18.04■□□□□ 0.48
CDK4-208ENST00000551706 SYPL2Q5VXT5 272 aa18.04■□□□□ 0.48
CDK4-208ENST00000551706 SYNPOQ8N3V7 929 aa18.04■□□□□ 0.48
CDK4-208ENST00000551706 NETO1Q8TDF5 533 aa18.04■□□□□ 0.48
CDK4-208ENST00000551706 NELL1Q92832 810 aa18.04■□□□□ 0.48
CDK4-208ENST00000551706 CD101Q93033 1021 aa18.04■□□□□ 0.48
CDK4-208ENST00000551706 CHFRQ96EP1 664 aa18.04■□□□□ 0.48
CDK4-208ENST00000551706 PCDHB18PQ96TA0 734 aa18.04■□□□□ 0.48
CDK4-208ENST00000551706 TMEM51Q9NW97 253 aa18.04■□□□□ 0.48
CDK4-208ENST00000551706 MARK1Q9P0L2 795 aa18.04■□□□□ 0.48
CDK4-208ENST00000551706 AGO1Q9UL18 857 aaKnown RBP18.04■□□□□ 0.48
CDK4-208ENST00000551706 LUC7L2Q9Y383 392 aaKnown RBP18.04■□□□□ 0.48
CDK4-208ENST00000551706 BZW2Q9Y6E2 419 aaKnown RBP18.04■□□□□ 0.48
CDK4-208ENST00000551706 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.03■□□□□ 0.48
CDK4-208ENST00000551706 SLC30A4O14863 429 aa18.03■□□□□ 0.48
CDK4-208ENST00000551706 TRUB2O95900 331 aaKnown RBP18.03■□□□□ 0.48
CDK4-208ENST00000551706 CHRNB1P11230 501 aa18.03■□□□□ 0.48
CDK4-208ENST00000551706 TNFAIP3P21580 790 aa18.03■□□□□ 0.48
CDK4-208ENST00000551706 DMWDQ09019 674 aa18.03■□□□□ 0.48
CDK4-208ENST00000551706 KLHL30Q0D2K2 578 aa18.03■□□□□ 0.48
CDK4-208ENST00000551706 ANO4Q32M45 955 aa18.03■□□□□ 0.48
CDK4-208ENST00000551706 FAM102AQ5T9C2 384 aaPredicted RBP18.03■□□□□ 0.48
CDK4-208ENST00000551706 SPECC1LQ69YQ0 1117 aa18.03■□□□□ 0.48
CDK4-208ENST00000551706 SARM1Q6SZW1 724 aa18.03■□□□□ 0.48
CDK4-208ENST00000551706 MMS22LQ6ZRQ5 1243 aa18.03■□□□□ 0.48
CDK4-208ENST00000551706 ARCQ7LC44 396 aa18.03■□□□□ 0.48
CDK4-208ENST00000551706 TAC4Q86UU9 113 aa18.03■□□□□ 0.48
CDK4-208ENST00000551706 TMEM25Q86YD3 366 aa18.03■□□□□ 0.48
CDK4-208ENST00000551706 PHF13Q86YI8 300 aaPredicted RBP18.03■□□□□ 0.48
CDK4-208ENST00000551706 DEFB106AQ8N104 65 aa18.03■□□□□ 0.48
CDK4-208ENST00000551706 CPXM2Q8N436 756 aa18.03■□□□□ 0.48
CDK4-208ENST00000551706 AZIN2Q96A70 460 aa18.03■□□□□ 0.48
CDK4-208ENST00000551706 SYT11Q9BT88 431 aa18.03■□□□□ 0.48
CDK4-208ENST00000551706 LMAN1LQ9HAT1 526 aa18.03■□□□□ 0.48
CDK4-208ENST00000551706 STAP1Q9ULZ2 295 aa18.03■□□□□ 0.48
CDK4-208ENST00000551706 IRAK2O43187 625 aa18.02■□□□□ 0.48
CDK4-208ENST00000551706 GRAP2O75791 330 aa18.02■□□□□ 0.48
CDK4-208ENST00000551706 IGLV3-25P01717 112 aa18.02■□□□□ 0.48
CDK4-208ENST00000551706 GYPCP04921 128 aa18.02■□□□□ 0.48
CDK4-208ENST00000551706 CALB1P05937 261 aa18.02■□□□□ 0.48
CDK4-208ENST00000551706 MATKP42679 507 aa18.02■□□□□ 0.48
CDK4-208ENST00000551706 SLC11A2P49281 568 aa18.02■□□□□ 0.48
CDK4-208ENST00000551706 GALK1P51570 392 aa18.02■□□□□ 0.48
CDK4-208ENST00000551706 MTA1Q13330 715 aa18.02■□□□□ 0.48
CDK4-208ENST00000551706 FZD5Q13467 585 aa18.02■□□□□ 0.48
CDK4-208ENST00000551706 CCINQ13939 588 aa18.02■□□□□ 0.48
CDK4-208ENST00000551706 GAB4Q2WGN9 574 aa18.02■□□□□ 0.48
CDK4-208ENST00000551706 FBXO43Q4G163 708 aa18.02■□□□□ 0.48
CDK4-208ENST00000551706 FAM217AQ8IXS0 508 aa18.02■□□□□ 0.48
CDK4-208ENST00000551706 CCDC26Q8TAB7 109 aa18.02■□□□□ 0.48
CDK4-208ENST00000551706 SLC30A5Q8TAD4 765 aa18.02■□□□□ 0.48
CDK4-208ENST00000551706 CPLX3Q8WVH0 158 aa18.02■□□□□ 0.48
CDK4-208ENST00000551706 SLC39A13Q96H72 371 aa18.02■□□□□ 0.48
CDK4-208ENST00000551706 XPO6Q96QU8 1125 aaKnown RBP18.02■□□□□ 0.48
CDK4-208ENST00000551706 DDX50Q9BQ39 737 aaKnown RBP18.02■□□□□ 0.48
CDK4-208ENST00000551706 BBS2Q9BXC9 721 aa18.02■□□□□ 0.48
CDK4-208ENST00000551706 IRX2Q9BZI1 471 aaPredicted RBP18.02■□□□□ 0.48
CDK4-208ENST00000551706 HAUS4Q9H6D7 363 aa18.02■□□□□ 0.48
CDK4-208ENST00000551706 FAM204AQ9H8W3 233 aa18.02■□□□□ 0.48
CDK4-208ENST00000551706 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.02■□□□□ 0.48
CDK4-208ENST00000551706 ADAM22Q9P0K1 906 aa18.02■□□□□ 0.48
CDK4-208ENST00000551706 STOML2Q9UJZ1 356 aa18.02■□□□□ 0.48
CDK4-208ENST00000551706 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.02■□□□□ 0.48
CDK4-208ENST00000551706 COL4A3Q01955 1670 aa18.02■□□□□ 0.47
CDK4-208ENST00000551706 F5P12259 2224 aa18.02■□□□□ 0.47
CDK4-208ENST00000551706 APOEP02649 317 aa18.01■□□□□ 0.47
CDK4-208ENST00000551706 CYBBP04839 570 aa18.01■□□□□ 0.47
CDK4-208ENST00000551706 TPM1P09493 284 aa18.01■□□□□ 0.47
CDK4-208ENST00000551706 SLC2A3P11169 496 aa18.01■□□□□ 0.47
CDK4-208ENST00000551706 OPRD1P41143 372 aa18.01■□□□□ 0.47
CDK4-208ENST00000551706 GSCP56915 257 aaPredicted RBP18.01■□□□□ 0.47
CDK4-208ENST00000551706 RNASE9P60153 205 aaKnown RBP18.01■□□□□ 0.47
CDK4-208ENST00000551706 C1QBPQ07021 282 aaKnown RBP18.01■□□□□ 0.47
CDK4-208ENST00000551706 SPEM2Q0P670 501 aa18.01■□□□□ 0.47
CDK4-208ENST00000551706 ADGRF1Q5T601 910 aa18.01■□□□□ 0.47
CDK4-208ENST00000551706 E4F1Q66K89 784 aaPredicted RBP18.01■□□□□ 0.47
CDK4-208ENST00000551706 ACAD10Q6JQN1 1059 aa18.01■□□□□ 0.47
CDK4-208ENST00000551706 TPGS1Q6ZTW0 290 aa18.01■□□□□ 0.47
CDK4-208ENST00000551706 VSTM4Q8IW00 320 aa18.01■□□□□ 0.47
CDK4-208ENST00000551706 ADAM32Q8TC27 787 aa18.01■□□□□ 0.47
CDK4-208ENST00000551706 PNKPQ96T60 521 aa18.01■□□□□ 0.47
CDK4-208ENST00000551706 C11orf70Q9BRQ4 267 aa18.01■□□□□ 0.47
CDK4-208ENST00000551706 CHRDQ9H2X0 955 aa18.01■□□□□ 0.47
CDK4-208ENST00000551706 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.01■□□□□ 0.47
CDK4-208ENST00000551706 DDIT4Q9NX09 232 aa18.01■□□□□ 0.47
CDK4-208ENST00000551706 ANGPTL2Q9UKU9 493 aa18.01■□□□□ 0.47
CDK4-208ENST00000551706 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18■□□□□ 0.47
CDK4-208ENST00000551706 NEDD8-MDP1E9PL57 170 aa18■□□□□ 0.47
CDK4-208ENST00000551706 GOLGA8SH3BPF8 625 aa18■□□□□ 0.47
CDK4-208ENST00000551706 SERPING1P05155 500 aa18■□□□□ 0.47
CDK4-208ENST00000551706 TYRP14679 529 aa18■□□□□ 0.47
CDK4-208ENST00000551706 CCR1P32246 355 aa18■□□□□ 0.47
CDK4-208ENST00000551706 PTP4A2Q12974 167 aa18■□□□□ 0.47
CDK4-208ENST00000551706 EIF4EBP2Q13542 120 aaPredicted RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms