RNA–Protein interactions for RNA: ENST00000551552.1

AC004217.3-201, humanhuman

BASIC

Gene AC004217.3, Length 878 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004217.3-201ENST00000551552 TBC1D3EA0A087X179 549 aa4.87□□□□□ -1.63
AC004217.3-201ENST00000551552 TBC1D3KA0A087X1G2 549 aa4.87□□□□□ -1.63
AC004217.3-201ENST00000551552 TBC1D3BA6NDS4 549 aa4.87□□□□□ -1.63
AC004217.3-201ENST00000551552 TBC1D3FA6NER0 549 aaPredicted RBP4.87□□□□□ -1.63
AC004217.3-201ENST00000551552 TBC1D3LB9A6J9 549 aa4.87□□□□□ -1.63
AC004217.3-201ENST00000551552 KIAA0355O15063 1070 aa4.87□□□□□ -1.63
AC004217.3-201ENST00000551552 SLC16A3O15427 465 aaKnown RBP4.87□□□□□ -1.63
AC004217.3-201ENST00000551552 KLK10O43240 276 aa4.87□□□□□ -1.63
AC004217.3-201ENST00000551552 CBFA2T3O75081 653 aa4.87□□□□□ -1.63
AC004217.3-201ENST00000551552 CDKL5O76039 1030 aa4.87□□□□□ -1.63
AC004217.3-201ENST00000551552 TBC1D3HP0C7X1 549 aa4.87□□□□□ -1.63
AC004217.3-201ENST00000551552 NR4A1P22736 598 aa4.87□□□□□ -1.63
AC004217.3-201ENST00000551552 MMP8P22894 467 aa4.87□□□□□ -1.63
AC004217.3-201ENST00000551552 LIPAP38571 399 aa4.87□□□□□ -1.63
AC004217.3-201ENST00000551552 NAP1L1P55209 391 aaKnown RBP4.87□□□□□ -1.63
AC004217.3-201ENST00000551552 FAM189BP81408 668 aa4.87□□□□□ -1.63
AC004217.3-201ENST00000551552 ITIH3Q06033 890 aa4.87□□□□□ -1.63
AC004217.3-201ENST00000551552 CBFBQ13951 182 aa4.87□□□□□ -1.63
AC004217.3-201ENST00000551552 PTPAQ15257 358 aa4.87□□□□□ -1.63
AC004217.3-201ENST00000551552 ST3GAL2Q16842 350 aa4.87□□□□□ -1.63
AC004217.3-201ENST00000551552 HAUS3Q68CZ6 603 aa4.87□□□□□ -1.63
AC004217.3-201ENST00000551552 TBC1D3GQ6DHY5 549 aa4.87□□□□□ -1.63
AC004217.3-201ENST00000551552 TBC1D3CQ6IPX1 549 aa4.87□□□□□ -1.63
AC004217.3-201ENST00000551552 ACAD10Q6JQN1 1059 aa4.87□□□□□ -1.63
AC004217.3-201ENST00000551552 PIK3AP1Q6ZUJ8 805 aa4.87□□□□□ -1.63
AC004217.3-201ENST00000551552 DTX2Q86UW9 622 aa4.87□□□□□ -1.63
AC004217.3-201ENST00000551552 TBC1D3Q8IZP1 549 aaPredicted RBP4.87□□□□□ -1.63
AC004217.3-201ENST00000551552 ZNF276Q8N554 614 aa4.87□□□□□ -1.63
AC004217.3-201ENST00000551552 FAM71DQ8N9W8 422 aa4.87□□□□□ -1.63
AC004217.3-201ENST00000551552 CPEB3Q8NE35 698 aaKnown RBP4.87□□□□□ -1.63
AC004217.3-201ENST00000551552 TOR1AIP2Q8NFQ8 470 aa4.87□□□□□ -1.63
AC004217.3-201ENST00000551552 RFFLQ8WZ73 363 aa4.87□□□□□ -1.63
AC004217.3-201ENST00000551552 R3HDM4Q96D70 268 aa4.87□□□□□ -1.63
AC004217.3-201ENST00000551552 BARD1Q99728 777 aaKnown RBP4.87□□□□□ -1.63
AC004217.3-201ENST00000551552 MLST8Q9BVC4 326 aa4.87□□□□□ -1.63
AC004217.3-201ENST00000551552 ACAD9Q9H845 621 aa4.87□□□□□ -1.63
AC004217.3-201ENST00000551552 TMEM74BQ9NUR3 256 aa4.87□□□□□ -1.63
AC004217.3-201ENST00000551552 NRBP1Q9UHY1 535 aa4.87□□□□□ -1.63
AC004217.3-201ENST00000551552 RAB21Q9UL25 225 aa4.87□□□□□ -1.63
AC004217.3-201ENST00000551552 TBX20Q9UMR3 447 aa4.87□□□□□ -1.63
AC004217.3-201ENST00000551552 ANKRD18BA2A2Z9 1011 aa4.86□□□□□ -1.63
AC004217.3-201ENST00000551552 VWA3AA6NCI4 1184 aa4.86□□□□□ -1.63
AC004217.3-201ENST00000551552 FAM90A20PA6NIJ5 464 aa4.86□□□□□ -1.63
AC004217.3-201ENST00000551552 SAC3D1A6NKF1 404 aa4.86□□□□□ -1.63
AC004217.3-201ENST00000551552 CTIFO43310 598 aaKnown RBP4.86□□□□□ -1.63
AC004217.3-201ENST00000551552 RTN3O95197 1032 aaPredicted RBP4.86□□□□□ -1.63
AC004217.3-201ENST00000551552 DDX58O95786 925 aaKnown RBP4.86□□□□□ -1.63
AC004217.3-201ENST00000551552 CYP21A2P08686 494 aa4.86□□□□□ -1.63
AC004217.3-201ENST00000551552 CREB1P16220 341 aa4.86□□□□□ -1.63
AC004217.3-201ENST00000551552 PPP3CBP16298 524 aa4.86□□□□□ -1.63
AC004217.3-201ENST00000551552 DDX6P26196 483 aaKnown RBP eCLIP4.86□□□□□ -1.63
AC004217.3-201ENST00000551552 ZFP36P26651 326 aaKnown RBP4.86□□□□□ -1.63
AC004217.3-201ENST00000551552 PAFAH1B1P43034 410 aa4.86□□□□□ -1.63
AC004217.3-201ENST00000551552 PCP4P48539 62 aa4.86□□□□□ -1.63
AC004217.3-201ENST00000551552 CLNS1AP54105 237 aaKnown RBP4.86□□□□□ -1.63
AC004217.3-201ENST00000551552 NXPH1P58417 271 aa4.86□□□□□ -1.63
AC004217.3-201ENST00000551552 RBM6P78332 1123 aaKnown RBP4.86□□□□□ -1.63
AC004217.3-201ENST00000551552 IRX6P78412 446 aaPredicted RBP4.86□□□□□ -1.63
AC004217.3-201ENST00000551552 MTAPQ13126 283 aa4.86□□□□□ -1.63
AC004217.3-201ENST00000551552 KRT32Q14532 448 aa4.86□□□□□ -1.63
AC004217.3-201ENST00000551552 TOMM20Q15388 145 aa4.86□□□□□ -1.63
AC004217.3-201ENST00000551552 GPR68Q15743 365 aa4.86□□□□□ -1.63
AC004217.3-201ENST00000551552 TBCCQ15814 346 aa4.86□□□□□ -1.63
AC004217.3-201ENST00000551552 NFIL3Q16649 462 aa4.86□□□□□ -1.63
AC004217.3-201ENST00000551552 ZNF484Q5JVG2 852 aa4.86□□□□□ -1.63
AC004217.3-201ENST00000551552 WDR45BQ5MNZ6 344 aa4.86□□□□□ -1.63
AC004217.3-201ENST00000551552 TREML2Q5T2D2 321 aa4.86□□□□□ -1.63
AC004217.3-201ENST00000551552 GPATCH4Q5T3I0 446 aaKnown RBP4.86□□□□□ -1.63
AC004217.3-201ENST00000551552 SLC9C2Q5TAH2 1124 aa4.86□□□□□ -1.63
AC004217.3-201ENST00000551552 RASGRP2Q7LDG7 609 aa4.86□□□□□ -1.63
AC004217.3-201ENST00000551552 LRRC71Q8N4P6 559 aa4.86□□□□□ -1.63
AC004217.3-201ENST00000551552 PROKR1Q8TCW9 393 aa4.86□□□□□ -1.63
AC004217.3-201ENST00000551552 RNF125Q96EQ8 232 aa4.86□□□□□ -1.63
AC004217.3-201ENST00000551552 FAR2Q96K12 515 aa4.86□□□□□ -1.63
AC004217.3-201ENST00000551552 PIGSQ96S52 555 aa4.86□□□□□ -1.63
AC004217.3-201ENST00000551552 PLEKHA2Q9HB19 425 aa4.86□□□□□ -1.63
AC004217.3-201ENST00000551552 TRIM36Q9NQ86 728 aa4.86□□□□□ -1.63
AC004217.3-201ENST00000551552 TBCCD1Q9NVR7 557 aa4.86□□□□□ -1.63
AC004217.3-201ENST00000551552 ORC3Q9UBD5 711 aaPredicted RBP4.86□□□□□ -1.63
AC004217.3-201ENST00000551552 TESQ9UGI8 421 aaKnown RBP4.86□□□□□ -1.63
AC004217.3-201ENST00000551552 CNOT7Q9UIV1 285 aaKnown RBP4.86□□□□□ -1.63
AC004217.3-201ENST00000551552 SUFUQ9UMX1 484 aa4.86□□□□□ -1.63
AC004217.3-201ENST00000551552 SLC12A4Q9UP95 1085 aa4.86□□□□□ -1.63
AC004217.3-201ENST00000551552 ZBTB1Q9Y2K1 713 aa4.86□□□□□ -1.63
AC004217.3-201ENST00000551552 RPS6KL1Q9Y6S9 549 aa4.86□□□□□ -1.63
AC004217.3-201ENST00000551552 A0A1W2PPH5 198 aa4.85□□□□□ -1.63
AC004217.3-201ENST00000551552 AGAP5A6NIR3 686 aa4.85□□□□□ -1.63
AC004217.3-201ENST00000551552 SLC38A8A6NNN8 435 aa4.85□□□□□ -1.63
AC004217.3-201ENST00000551552 CES2O00748 559 aa4.85□□□□□ -1.63
AC004217.3-201ENST00000551552 HNRNPRO43390 633 aaKnown RBP4.85□□□□□ -1.63
AC004217.3-201ENST00000551552 FIBPO43427 364 aa4.85□□□□□ -1.63
AC004217.3-201ENST00000551552 ZBED4O75132 1171 aa4.85□□□□□ -1.63
AC004217.3-201ENST00000551552 FESP07332 822 aa4.85□□□□□ -1.63
AC004217.3-201ENST00000551552 ALADP13716 330 aa4.85□□□□□ -1.63
AC004217.3-201ENST00000551552 GRK5P34947 590 aa4.85□□□□□ -1.63
AC004217.3-201ENST00000551552 HNRNPMP52272 730 aaKnown RBP eCLIP4.85□□□□□ -1.63
AC004217.3-201ENST00000551552 SF3B3Q15393 1217 aaKnown RBP4.85□□□□□ -1.63
AC004217.3-201ENST00000551552 LRRC24Q50LG9 513 aa4.85□□□□□ -1.63
AC004217.3-201ENST00000551552 SLC45A4Q5BKX6 768 aa4.85□□□□□ -1.63
AC004217.3-201ENST00000551552 LY6G5CQ5SRR4 150 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms