RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 TKTL2Q9H0I9 626 aa12.55□□□□□ -0.4
NR4A1-215ENST00000550557 MLXIPLQ9NP71 852 aa12.55□□□□□ -0.4
NR4A1-215ENST00000550557 CNTNAP1P78357 1384 aa12.55□□□□□ -0.4
NR4A1-215ENST00000550557 DOT1LQ8TEK3 1739 aa12.55□□□□□ -0.4
NR4A1-215ENST00000550557 SIPA1L3O60292 1781 aaPredicted RBP12.54□□□□□ -0.4
NR4A1-215ENST00000550557 SYNDIG1LA6NDD5 238 aa12.54□□□□□ -0.4
NR4A1-215ENST00000550557 E5RJQ4 531 aa12.54□□□□□ -0.4
NR4A1-215ENST00000550557 CASP5P51878 434 aa12.54□□□□□ -0.4
NR4A1-215ENST00000550557 KCNMA1Q12791 1236 aa12.54□□□□□ -0.4
NR4A1-215ENST00000550557 CLEC16AQ2KHT3 1053 aa12.54□□□□□ -0.4
NR4A1-215ENST00000550557 ACAD11Q709F0 780 aa12.54□□□□□ -0.4
NR4A1-215ENST00000550557 PIGZQ86VD9 579 aa12.54□□□□□ -0.4
NR4A1-215ENST00000550557 DENND1CQ8IV53 801 aa12.54□□□□□ -0.4
NR4A1-215ENST00000550557 CNPY4Q8N129 248 aa12.54□□□□□ -0.4
NR4A1-215ENST00000550557 TOP6BLQ8N6T0 577 aa12.54□□□□□ -0.4
NR4A1-215ENST00000550557 SLC20A1Q8WUM9 679 aa12.54□□□□□ -0.4
NR4A1-215ENST00000550557 LZICQ8WZA0 190 aa12.54□□□□□ -0.4
NR4A1-215ENST00000550557 BTBD6Q96KE9 485 aa12.54□□□□□ -0.4
NR4A1-215ENST00000550557 TGS1Q96RS0 853 aaKnown RBP12.54□□□□□ -0.4
NR4A1-215ENST00000550557 TBCBQ99426 244 aa12.54□□□□□ -0.4
NR4A1-215ENST00000550557 GOLGA2P5Q9HBQ8 144 aa12.54□□□□□ -0.4
NR4A1-215ENST00000550557 TRMT6Q9UJA5 497 aaKnown RBP12.54□□□□□ -0.4
NR4A1-215ENST00000550557 NUP98P52948 1817 aa12.54□□□□□ -0.4
NR4A1-215ENST00000550557 A0A1W2PQ45 241 aaPredicted RBP12.54□□□□□ -0.4
NR4A1-215ENST00000550557 A0A1W2PQY0 241 aa12.54□□□□□ -0.4
NR4A1-215ENST00000550557 DCTN3O75935 186 aa12.54□□□□□ -0.4
NR4A1-215ENST00000550557 TRUB2O95900 331 aaKnown RBP12.54□□□□□ -0.4
NR4A1-215ENST00000550557 PFKMP08237 780 aa12.54□□□□□ -0.4
NR4A1-215ENST00000550557 CYP2A6P11509 494 aaPredicted RBP12.54□□□□□ -0.4
NR4A1-215ENST00000550557 BRAFP15056 766 aa12.54□□□□□ -0.4
NR4A1-215ENST00000550557 ECM1Q16610 540 aa12.54□□□□□ -0.4
NR4A1-215ENST00000550557 HIST2H2ACQ16777 129 aaPredicted RBP12.54□□□□□ -0.4
NR4A1-215ENST00000550557 PHKG1Q16816 387 aa12.54□□□□□ -0.4
NR4A1-215ENST00000550557 HIST2H2AA3Q6FI13 130 aa12.54□□□□□ -0.4
NR4A1-215ENST00000550557 EPM2AIP1Q7L775 607 aaPredicted RBP12.54□□□□□ -0.4
NR4A1-215ENST00000550557 APTXQ7Z2E3 356 aaKnown RBP12.54□□□□□ -0.4
NR4A1-215ENST00000550557 PACS2Q86VP3 889 aa12.54□□□□□ -0.4
NR4A1-215ENST00000550557 ATAD1Q8NBU5 361 aa12.54□□□□□ -0.4
NR4A1-215ENST00000550557 MCRS1Q96EZ8 462 aa12.54□□□□□ -0.4
NR4A1-215ENST00000550557 AHCYL2Q96HN2 611 aaKnown RBP12.54□□□□□ -0.4
NR4A1-215ENST00000550557 KDM4CQ9H3R0 1056 aa12.54□□□□□ -0.4
NR4A1-215ENST00000550557 FAM96AQ9H5X1 160 aa12.54□□□□□ -0.4
NR4A1-215ENST00000550557 XAB2Q9HCS7 855 aaKnown RBP12.54□□□□□ -0.4
NR4A1-215ENST00000550557 FAF1Q9UNN5 650 aaPredicted RBP12.54□□□□□ -0.4
NR4A1-215ENST00000550557 DNM1LO00429 736 aa12.54□□□□□ -0.4
NR4A1-215ENST00000550557 PPFIA2O75334 1257 aa12.54□□□□□ -0.4
NR4A1-215ENST00000550557 SPRP35270 261 aaPredicted RBP12.54□□□□□ -0.4
NR4A1-215ENST00000550557 C1QTNF8P60827 252 aa12.54□□□□□ -0.4
NR4A1-215ENST00000550557 ESRRGP62508 458 aa12.54□□□□□ -0.4
NR4A1-215ENST00000550557 CAPRIN1Q14444 709 aaKnown RBP12.54□□□□□ -0.4
NR4A1-215ENST00000550557 JAMLQ86YT9 394 aa12.54□□□□□ -0.4
NR4A1-215ENST00000550557 GPR152Q8TDT2 470 aa12.54□□□□□ -0.4
NR4A1-215ENST00000550557 RBM15Q96T37 977 aaKnown RBP eCLIP12.54□□□□□ -0.4
NR4A1-215ENST00000550557 DEC1Q9P2X7 70 aa12.54□□□□□ -0.4
NR4A1-215ENST00000550557 MEI4A8MW99 385 aa12.54□□□□□ -0.4
NR4A1-215ENST00000550557 SMAPO00193 183 aa12.54□□□□□ -0.4
NR4A1-215ENST00000550557 ADAMTS3O15072 1205 aa12.54□□□□□ -0.4
NR4A1-215ENST00000550557 LDLRAD1Q5T700 205 aa12.54□□□□□ -0.4
NR4A1-215ENST00000550557 FAXCQ5TGI0 409 aa12.54□□□□□ -0.4
NR4A1-215ENST00000550557 SHISA4Q96DD7 197 aa12.54□□□□□ -0.4
NR4A1-215ENST00000550557 ERP44Q9BS26 406 aa12.54□□□□□ -0.4
NR4A1-215ENST00000550557 OXCT2Q9BYC2 517 aaPredicted RBP12.54□□□□□ -0.4
NR4A1-215ENST00000550557 DERAQ9Y315 318 aa12.54□□□□□ -0.4
NR4A1-215ENST00000550557 RCCD1A6NED2 376 aa12.53□□□□□ -0.4
NR4A1-215ENST00000550557 PDE2AO00408 941 aaPredicted RBP12.53□□□□□ -0.4
NR4A1-215ENST00000550557 SPATA31C1P0DKV0 1188 aa12.53□□□□□ -0.4
NR4A1-215ENST00000550557 SERPINA4P29622 427 aa12.53□□□□□ -0.4
NR4A1-215ENST00000550557 CNGA2Q16280 664 aa12.53□□□□□ -0.4
NR4A1-215ENST00000550557 SPDYAQ5MJ70 313 aa12.53□□□□□ -0.4
NR4A1-215ENST00000550557 FAM47EQ6ZV65 393 aa12.53□□□□□ -0.4
NR4A1-215ENST00000550557 PIK3R5Q8WYR1 880 aa12.53□□□□□ -0.4
NR4A1-215ENST00000550557 KCTD10Q9H3F6 313 aa12.53□□□□□ -0.4
NR4A1-215ENST00000550557 CHMP2BQ9UQN3 213 aa12.53□□□□□ -0.4
NR4A1-215ENST00000550557 MAFBQ9Y5Q3 323 aaPredicted RBP12.53□□□□□ -0.4
NR4A1-215ENST00000550557 CES2O00748 559 aa12.53□□□□□ -0.4
NR4A1-215ENST00000550557 SRP72O76094 671 aaKnown RBP12.53□□□□□ -0.4
NR4A1-215ENST00000550557 APODP05090 189 aa12.53□□□□□ -0.4
NR4A1-215ENST00000550557 MZF1P28698 734 aaPredicted RBP12.53□□□□□ -0.4
NR4A1-215ENST00000550557 NOS2P35228 1153 aa12.53□□□□□ -0.4
NR4A1-215ENST00000550557 CENPCQ03188 943 aa12.53□□□□□ -0.4
NR4A1-215ENST00000550557 MTM1Q13496 603 aa12.53□□□□□ -0.4
NR4A1-215ENST00000550557 ZC3H12AQ5D1E8 599 aaKnown RBP12.53□□□□□ -0.4
NR4A1-215ENST00000550557 RAP1GAP2Q684P5 730 aa12.53□□□□□ -0.4
NR4A1-215ENST00000550557 ARHGEF19Q8IW93 802 aa12.53□□□□□ -0.4
NR4A1-215ENST00000550557 HJURPQ8NCD3 748 aaPredicted RBP12.53□□□□□ -0.4
NR4A1-215ENST00000550557 TBC1D14Q9P2M4 693 aa12.53□□□□□ -0.4
NR4A1-215ENST00000550557 NEU2Q9Y3R4 380 aa12.53□□□□□ -0.4
NR4A1-215ENST00000550557 H2AFYO75367 372 aaKnown RBP12.53□□□□□ -0.4
NR4A1-215ENST00000550557 PROSCO94903 275 aa12.53□□□□□ -0.4
NR4A1-215ENST00000550557 NFATC1O95644 943 aa12.53□□□□□ -0.4
NR4A1-215ENST00000550557 IL1BP01584 269 aa12.53□□□□□ -0.4
NR4A1-215ENST00000550557 EPB42P16452 691 aa12.53□□□□□ -0.4
NR4A1-215ENST00000550557 PTPN2P17706 415 aa12.53□□□□□ -0.4
NR4A1-215ENST00000550557 TFDP3Q5H9I0 405 aa12.53□□□□□ -0.4
NR4A1-215ENST00000550557 C9orf57Q5W0N0 161 aa12.53□□□□□ -0.4
NR4A1-215ENST00000550557 WNT8BQ93098 351 aa12.53□□□□□ -0.4
NR4A1-215ENST00000550557 SEPT3Q9UH03 358 aa12.53□□□□□ -0.4
NR4A1-215ENST00000550557 VAV3Q9UKW4 847 aa12.53□□□□□ -0.4
NR4A1-215ENST00000550557 MRPL42Q9Y6G3 142 aaKnown RBP12.53□□□□□ -0.4
NR4A1-215ENST00000550557 CFLARO15519 480 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms