RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 CD93Q9NPY3 652 aa24.12■■□□□ 1.45
SMARCD1-209ENST00000550477 KLK13Q9UKR3 277 aa24.12■■□□□ 1.45
SMARCD1-209ENST00000550477 KIAA1257Q9ULG3 409 aa24.12■■□□□ 1.45
SMARCD1-209ENST00000550477 APOBEC2Q9Y235 224 aaKnown RBP24.12■■□□□ 1.45
SMARCD1-209ENST00000550477 PCDH15Q96QU1 1955 aa24.12■■□□□ 1.45
SMARCD1-209ENST00000550477 METTL12A8MUP2 240 aa24.11■■□□□ 1.45
SMARCD1-209ENST00000550477 BCAT2O15382 392 aaPredicted RBP24.11■■□□□ 1.45
SMARCD1-209ENST00000550477 CD19P15391 556 aa24.11■■□□□ 1.45
SMARCD1-209ENST00000550477 GRIK2Q13002 908 aa24.11■■□□□ 1.45
SMARCD1-209ENST00000550477 TRIP4Q15650 581 aaPredicted RBP24.11■■□□□ 1.45
SMARCD1-209ENST00000550477 GOLGA7BQ2TAP0 167 aa24.11■■□□□ 1.45
SMARCD1-209ENST00000550477 FMNL3Q8IVF7 1028 aa24.11■■□□□ 1.45
SMARCD1-209ENST00000550477 NAXDQ8IW45 347 aa24.11■■□□□ 1.45
SMARCD1-209ENST00000550477 FAM217AQ8IXS0 508 aa24.11■■□□□ 1.45
SMARCD1-209ENST00000550477 CHCHD4Q8N4Q1 142 aa24.11■■□□□ 1.45
SMARCD1-209ENST00000550477 TATDN2Q93075 761 aa24.11■■□□□ 1.45
SMARCD1-209ENST00000550477 TMA16Q96EY4 203 aaKnown RBP24.11■■□□□ 1.45
SMARCD1-209ENST00000550477 ARID3AQ99856 593 aa24.11■■□□□ 1.45
SMARCD1-209ENST00000550477 ABCC13Q9NSE7 274 aa24.11■■□□□ 1.45
SMARCD1-209ENST00000550477 TSPAN16Q9UKR8 245 aa24.11■■□□□ 1.45
SMARCD1-209ENST00000550477 FAM208BQ5VWN6 2430 aa24.11■■□□□ 1.45
SMARCD1-209ENST00000550477 FAM221BA6H8Z2 402 aa24.1■■□□□ 1.45
SMARCD1-209ENST00000550477 SLC16A3O15427 465 aaKnown RBP24.1■■□□□ 1.45
SMARCD1-209ENST00000550477 LATS1O95835 1130 aa24.1■■□□□ 1.45
SMARCD1-209ENST00000550477 VDRP11473 427 aa24.1■■□□□ 1.45
SMARCD1-209ENST00000550477 TBXAS1P24557 533 aaPredicted RBP24.1■■□□□ 1.45
SMARCD1-209ENST00000550477 FKBP3Q00688 224 aaKnown RBP24.1■■□□□ 1.45
SMARCD1-209ENST00000550477 PDE4CQ08493 712 aa24.1■■□□□ 1.45
SMARCD1-209ENST00000550477 ZCCHC9Q8N567 271 aaKnown RBP24.1■■□□□ 1.45
SMARCD1-209ENST00000550477 ZNF557Q8N988 423 aaPredicted RBP24.1■■□□□ 1.45
SMARCD1-209ENST00000550477 OR2T3Q8NH03 318 aa24.1■■□□□ 1.45
SMARCD1-209ENST00000550477 EEF2KMTQ96G04 330 aa24.1■■□□□ 1.45
SMARCD1-209ENST00000550477 FBRSQ9HAH7 460 aa24.1■■□□□ 1.45
SMARCD1-209ENST00000550477 SRRM3A6NNA2 597 aaPredicted RBP24.09■■□□□ 1.45
SMARCD1-209ENST00000550477 GJB3O75712 270 aa24.09■■□□□ 1.45
SMARCD1-209ENST00000550477 IGLV3-19P01714 112 aa24.09■■□□□ 1.45
SMARCD1-209ENST00000550477 MATKP42679 507 aa24.09■■□□□ 1.45
SMARCD1-209ENST00000550477 CUL2Q13617 745 aa24.09■■□□□ 1.45
SMARCD1-209ENST00000550477 SUZ12Q15022 739 aaKnown RBP24.09■■□□□ 1.45
SMARCD1-209ENST00000550477 FNDC3BQ53EP0 1204 aaKnown RBP24.09■■□□□ 1.45
SMARCD1-209ENST00000550477 ADGRF1Q5T601 910 aa24.09■■□□□ 1.45
SMARCD1-209ENST00000550477 BSPRYQ5W0U4 402 aa24.09■■□□□ 1.45
SMARCD1-209ENST00000550477 SETD7Q8WTS6 366 aaKnown RBP24.09■■□□□ 1.45
SMARCD1-209ENST00000550477 GOLGA1Q92805 767 aa24.09■■□□□ 1.45
SMARCD1-209ENST00000550477 CNGB3Q9NQW8 809 aa24.09■■□□□ 1.45
SMARCD1-209ENST00000550477 COQ4Q9Y3A0 265 aa24.09■■□□□ 1.45
SMARCD1-209ENST00000550477 GOLGA6L4A6NEF3 574 aa24.08■■□□□ 1.45
SMARCD1-209ENST00000550477 ATP5BP06576 529 aaKnown RBP24.08■■□□□ 1.45
SMARCD1-209ENST00000550477 ZNF883P0CG24 379 aa24.08■■□□□ 1.45
SMARCD1-209ENST00000550477 SETSIPP0DME0 302 aa24.08■■□□□ 1.45
SMARCD1-209ENST00000550477 FAM193AP78312 1265 aa24.08■■□□□ 1.45
SMARCD1-209ENST00000550477 ADIGQ0VDE8 80 aa24.08■■□□□ 1.45
SMARCD1-209ENST00000550477 RAB44Q7Z6P3 723 aaPredicted RBP24.08■■□□□ 1.45
SMARCD1-209ENST00000550477 UNC45BQ8IWX7 931 aa24.08■■□□□ 1.45
SMARCD1-209ENST00000550477 IRX2Q9BZI1 471 aaPredicted RBP24.08■■□□□ 1.45
SMARCD1-209ENST00000550477 GAREM1Q9H706 876 aa24.08■■□□□ 1.45
SMARCD1-209ENST00000550477 SFMBT1Q9UHJ3 866 aa24.08■■□□□ 1.45
SMARCD1-209ENST00000550477 EIF2B4Q9UI10 523 aaKnown RBP24.08■■□□□ 1.45
SMARCD1-209ENST00000550477 KCNJ18B7U540 433 aa24.07■■□□□ 1.44
SMARCD1-209ENST00000550477 TSPAN3O60637 253 aa24.07■■□□□ 1.44
SMARCD1-209ENST00000550477 SMC2O95347 1197 aa24.07■■□□□ 1.44
SMARCD1-209ENST00000550477 PRKCHP24723 683 aa24.07■■□□□ 1.44
SMARCD1-209ENST00000550477 COPAP53621 1224 aa24.07■■□□□ 1.44
SMARCD1-209ENST00000550477 TEAD4Q15561 434 aa24.07■■□□□ 1.44
SMARCD1-209ENST00000550477 SMYD4Q8IYR2 804 aaPredicted RBP24.07■■□□□ 1.44
SMARCD1-209ENST00000550477 AHI1Q8N157 1196 aa24.07■■□□□ 1.44
SMARCD1-209ENST00000550477 SCML4Q8N228 414 aa24.07■■□□□ 1.44
SMARCD1-209ENST00000550477 ADAMTS14Q8WXS8 1223 aa24.07■■□□□ 1.44
SMARCD1-209ENST00000550477 SORCS1Q8WY21 1168 aa24.07■■□□□ 1.44
SMARCD1-209ENST00000550477 KCTD13Q8WZ19 329 aa24.07■■□□□ 1.44
SMARCD1-209ENST00000550477 SNX19Q92543 992 aa24.07■■□□□ 1.44
SMARCD1-209ENST00000550477 P2RY11Q96G91 374 aa24.07■■□□□ 1.44
SMARCD1-209ENST00000550477 CAMK1GQ96NX5 476 aa24.07■■□□□ 1.44
SMARCD1-209ENST00000550477 GSDMAQ96QA5 445 aa24.07■■□□□ 1.44
SMARCD1-209ENST00000550477 LHX5Q9H2C1 402 aa24.07■■□□□ 1.44
SMARCD1-209ENST00000550477 ARMCX3Q9UH62 379 aaPredicted RBP24.07■■□□□ 1.44
SMARCD1-209ENST00000550477 SUN2Q9UH99 717 aa24.07■■□□□ 1.44
SMARCD1-209ENST00000550477 HOOK1Q9UJC3 728 aaKnown RBP24.07■■□□□ 1.44
SMARCD1-209ENST00000550477 CLEC4EQ9ULY5 219 aa24.07■■□□□ 1.44
SMARCD1-209ENST00000550477 FTH1P19P0C7X4 201 aa24.06■■□□□ 1.44
SMARCD1-209ENST00000550477 HOXD9P28356 352 aaPredicted RBP24.06■■□□□ 1.44
SMARCD1-209ENST00000550477 SLC11A2P49281 568 aa24.06■■□□□ 1.44
SMARCD1-209ENST00000550477 ZBTB16Q05516 673 aa24.06■■□□□ 1.44
SMARCD1-209ENST00000550477 CETN1Q12798 172 aa24.06■■□□□ 1.44
SMARCD1-209ENST00000550477 CAMK2GQ13555 558 aaPredicted RBP24.06■■□□□ 1.44
SMARCD1-209ENST00000550477 STIM1Q13586 685 aa24.06■■□□□ 1.44
SMARCD1-209ENST00000550477 ZNF658Q5TYW1 1059 aaPredicted RBP24.06■■□□□ 1.44
SMARCD1-209ENST00000550477 CHST9Q7L1S5 443 aa24.06■■□□□ 1.44
SMARCD1-209ENST00000550477 CCDC117Q8IWD4 279 aaPredicted RBP24.06■■□□□ 1.44
SMARCD1-209ENST00000550477 UBA3Q8TBC4 463 aa24.06■■□□□ 1.44
SMARCD1-209ENST00000550477 EDEM1Q92611 657 aa24.06■■□□□ 1.44
SMARCD1-209ENST00000550477 METTL14Q9HCE5 456 aaKnown RBP24.06■■□□□ 1.44
SMARCD1-209ENST00000550477 STOML2Q9UJZ1 356 aa24.06■■□□□ 1.44
SMARCD1-209ENST00000550477 ZDHHC9Q9Y397 364 aa24.06■■□□□ 1.44
SMARCD1-209ENST00000550477 CKAP5Q14008 2032 aa24.06■■□□□ 1.44
SMARCD1-209ENST00000550477 CHD6Q8TD26 2715 aa24.05■■□□□ 1.44
SMARCD1-209ENST00000550477 TYW5A2RUC4 315 aaKnown RBP24.05■■□□□ 1.44
SMARCD1-209ENST00000550477 DNTTP04053 509 aa24.05■■□□□ 1.44
SMARCD1-209ENST00000550477 PRCPP42785 496 aa24.05■■□□□ 1.44
SMARCD1-209ENST00000550477 AFF3P51826 1226 aaKnown RBP24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms