RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 SH3PXD2BA1X283 911 aa12.46□□□□□ -0.41
VDR-208ENST00000550325 FBP2O00757 339 aa12.46□□□□□ -0.41
VDR-208ENST00000550325 SNNO75324 88 aaPredicted RBP12.46□□□□□ -0.41
VDR-208ENST00000550325 MCF2P10911 925 aa12.46□□□□□ -0.41
VDR-208ENST00000550325 EPHA3P29320 983 aa12.46□□□□□ -0.41
VDR-208ENST00000550325 OXCT1P55809 520 aa12.46□□□□□ -0.41
VDR-208ENST00000550325 C21orf59P57076 290 aa12.46□□□□□ -0.41
VDR-208ENST00000550325 CES3Q6UWW8 571 aa12.46□□□□□ -0.41
VDR-208ENST00000550325 BBS12Q6ZW61 710 aa12.46□□□□□ -0.41
VDR-208ENST00000550325 SIAH1Q8IUQ4 282 aa12.46□□□□□ -0.41
VDR-208ENST00000550325 LILRA2Q8N149 483 aa12.46□□□□□ -0.41
VDR-208ENST00000550325 BBS5Q8N3I7 341 aa12.46□□□□□ -0.41
VDR-208ENST00000550325 KYQ8NBH2 561 aa12.46□□□□□ -0.41
VDR-208ENST00000550325 ATP6V1E2Q96A05 226 aa12.46□□□□□ -0.41
VDR-208ENST00000550325 CIB1Q99828 191 aa12.46□□□□□ -0.41
VDR-208ENST00000550325 GCOM2Q9BZD3 368 aaPredicted RBP12.46□□□□□ -0.41
VDR-208ENST00000550325 MYRFQ9Y2G1 1151 aa12.46□□□□□ -0.41
VDR-208ENST00000550325 MYH9P35579 1960 aaKnown RBP12.46□□□□□ -0.41
VDR-208ENST00000550325 LRCH4O75427 683 aa12.46□□□□□ -0.41
VDR-208ENST00000550325 SPAG6O75602 509 aa12.46□□□□□ -0.41
VDR-208ENST00000550325 ZBTB11O95625 1053 aaPredicted RBP12.46□□□□□ -0.41
VDR-208ENST00000550325 RBL1P28749 1068 aa12.46□□□□□ -0.41
VDR-208ENST00000550325 HOXD12P35452 270 aa12.46□□□□□ -0.41
VDR-208ENST00000550325 NUP107P57740 925 aa12.46□□□□□ -0.41
VDR-208ENST00000550325 CCDC142Q17RM4 750 aa12.46□□□□□ -0.41
VDR-208ENST00000550325 ZBTB41Q5SVQ8 909 aa12.46□□□□□ -0.41
VDR-208ENST00000550325 MAVSQ7Z434 540 aa12.46□□□□□ -0.41
VDR-208ENST00000550325 DSELQ8IZU8 1212 aa12.46□□□□□ -0.41
VDR-208ENST00000550325 MFSD14AQ96MC6 490 aa12.46□□□□□ -0.41
VDR-208ENST00000550325 ZNF696Q9H7X3 374 aa12.46□□□□□ -0.41
VDR-208ENST00000550325 COQ10BQ9H8M1 238 aa12.46□□□□□ -0.41
VDR-208ENST00000550325 PI4KBQ9UBF8 816 aa12.46□□□□□ -0.41
VDR-208ENST00000550325 NR2E3Q9Y5X4 410 aa12.46□□□□□ -0.41
VDR-208ENST00000550325 PTPRJQ12913 1337 aa12.46□□□□□ -0.41
VDR-208ENST00000550325 MYH14Q7Z406 1995 aaKnown RBP12.46□□□□□ -0.42
VDR-208ENST00000550325 GOLGB1Q14789 3259 aaKnown RBP12.46□□□□□ -0.42
VDR-208ENST00000550325 LRRIQ4A6NIV6 560 aa12.46□□□□□ -0.42
VDR-208ENST00000550325 LSM1O15116 133 aaKnown RBP12.46□□□□□ -0.42
VDR-208ENST00000550325 E2F6O75461 281 aa12.46□□□□□ -0.42
VDR-208ENST00000550325 SERPINE1P05121 402 aa12.46□□□□□ -0.42
VDR-208ENST00000550325 IL1R1P14778 569 aa12.46□□□□□ -0.42
VDR-208ENST00000550325 GRIA1P42261 906 aa12.46□□□□□ -0.42
VDR-208ENST00000550325 NDST2P52849 883 aa12.46□□□□□ -0.42
VDR-208ENST00000550325 PHEXP78562 749 aa12.46□□□□□ -0.42
VDR-208ENST00000550325 MTMR1Q13613 665 aa12.46□□□□□ -0.42
VDR-208ENST00000550325 SLC9A4Q6AI14 798 aa12.46□□□□□ -0.42
VDR-208ENST00000550325 LAYNQ6UX15 382 aa12.46□□□□□ -0.42
VDR-208ENST00000550325 TMEM179Q6ZVK1 233 aa12.46□□□□□ -0.42
VDR-208ENST00000550325 NANOGNBQ7Z5D8 188 aa12.46□□□□□ -0.42
VDR-208ENST00000550325 ZNF781Q8N8C0 355 aa12.46□□□□□ -0.42
VDR-208ENST00000550325 ACER1Q8TDN7 264 aa12.46□□□□□ -0.42
VDR-208ENST00000550325 ARHGEF1Q92888 912 aaKnown RBP12.46□□□□□ -0.42
VDR-208ENST00000550325 VCPIP1Q96JH7 1222 aa12.46□□□□□ -0.42
VDR-208ENST00000550325 COX4I2Q96KJ9 171 aa12.46□□□□□ -0.42
VDR-208ENST00000550325 CORO1BQ9BR76 489 aa12.46□□□□□ -0.42
VDR-208ENST00000550325 TMEM247A6NEH6 219 aa12.45□□□□□ -0.42
VDR-208ENST00000550325 BTBD19C9JJ37 291 aa12.45□□□□□ -0.42
VDR-208ENST00000550325 RAD17O75943 681 aa12.45□□□□□ -0.42
VDR-208ENST00000550325 CRHR1P34998 444 aa12.45□□□□□ -0.42
VDR-208ENST00000550325 MS4A2Q01362 244 aa12.45□□□□□ -0.42
VDR-208ENST00000550325 RELAQ04206 551 aa12.45□□□□□ -0.42
VDR-208ENST00000550325 TRAPPC3LQ5T215 181 aa12.45□□□□□ -0.42
VDR-208ENST00000550325 GPR107Q5VW38 600 aa12.45□□□□□ -0.42
VDR-208ENST00000550325 ZBTB33Q86T24 672 aa12.45□□□□□ -0.42
VDR-208ENST00000550325 CROCCP3Q8IVE0 287 aa12.45□□□□□ -0.42
VDR-208ENST00000550325 MAP4K3Q8IVH8 894 aa12.45□□□□□ -0.42
VDR-208ENST00000550325 KCTD17Q8N5Z5 321 aa12.45□□□□□ -0.42
VDR-208ENST00000550325 PCDH20Q8N6Y1 951 aaKnown RBP12.45□□□□□ -0.42
VDR-208ENST00000550325 FAM47BQ8NA70 645 aa12.45□□□□□ -0.42
VDR-208ENST00000550325 OR5B17Q8NGF7 314 aa12.45□□□□□ -0.42
VDR-208ENST00000550325 PDCD6IPQ8WUM4 868 aaKnown RBP12.45□□□□□ -0.42
VDR-208ENST00000550325 OR52B2Q96RD2 323 aa12.45□□□□□ -0.42
VDR-208ENST00000550325 MAF1Q9H063 256 aa12.45□□□□□ -0.42
VDR-208ENST00000550325 BCAP29Q9UHQ4 241 aa12.45□□□□□ -0.42
VDR-208ENST00000550325 AGO2Q9UKV8 859 aaKnown RBP12.45□□□□□ -0.42
VDR-208ENST00000550325 MRPL11Q9Y3B7 192 aaKnown RBP12.45□□□□□ -0.42
VDR-208ENST00000550325 PSMD12O00232 456 aaPredicted RBP12.45□□□□□ -0.42
VDR-208ENST00000550325 SPTLC1O15269 473 aa12.45□□□□□ -0.42
VDR-208ENST00000550325 AP1G1O43747 822 aa12.45□□□□□ -0.42
VDR-208ENST00000550325 TPST1O60507 370 aa12.45□□□□□ -0.42
VDR-208ENST00000550325 FGF3P11487 239 aaPredicted RBP12.45□□□□□ -0.42
VDR-208ENST00000550325 KPNA1P52294 538 aaPredicted RBP12.45□□□□□ -0.42
VDR-208ENST00000550325 EN1Q05925 392 aaPredicted RBP12.45□□□□□ -0.42
VDR-208ENST00000550325 VPS72Q15906 364 aa12.45□□□□□ -0.42
VDR-208ENST00000550325 MBLAC2Q68D91 279 aa12.45□□□□□ -0.42
VDR-208ENST00000550325 C16orf89Q6UX73 402 aa12.45□□□□□ -0.42
VDR-208ENST00000550325 TCF7L2Q9NQB0 619 aa12.45□□□□□ -0.42
VDR-208ENST00000550325 STK39Q9UEW8 545 aa12.45□□□□□ -0.42
VDR-208ENST00000550325 SEPT9Q9UHD8 586 aaPredicted RBP12.45□□□□□ -0.42
VDR-208ENST00000550325 CDC14AQ9UNH5 594 aa12.45□□□□□ -0.42
VDR-208ENST00000550325 CBFA2T3O75081 653 aa12.45□□□□□ -0.42
VDR-208ENST00000550325 FBXO21O94952 628 aa12.45□□□□□ -0.42
VDR-208ENST00000550325 KRT19P08727 400 aa12.45□□□□□ -0.42
VDR-208ENST00000550325 SOX11P35716 441 aa12.45□□□□□ -0.42
VDR-208ENST00000550325 CDK9P50750 372 aaKnown RBP12.45□□□□□ -0.42
VDR-208ENST00000550325 ABCE1P61221 599 aaKnown RBP12.45□□□□□ -0.42
VDR-208ENST00000550325 RPS6P62753 249 aaKnown RBP12.45□□□□□ -0.42
VDR-208ENST00000550325 TUBB3Q13509 450 aa12.45□□□□□ -0.42
VDR-208ENST00000550325 MTX3Q5HYI7 312 aa12.45□□□□□ -0.42
VDR-208ENST00000550325 C6orf183Q5T699 404 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms