RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 TMEM74BQ9NUR3 256 aa14.04□□□□□ -0.16
NUP188-211ENST00000550219 APEX2Q9UBZ4 518 aa14.04□□□□□ -0.16
NUP188-211ENST00000550219 CYP8B1Q9UNU6 501 aa14.04□□□□□ -0.16
NUP188-211ENST00000550219 SPTBN2O15020 2390 aa14.04□□□□□ -0.16
NUP188-211ENST00000550219 TNRC6BQ9UPQ9 1833 aaKnown RBP14.04□□□□□ -0.16
NUP188-211ENST00000550219 NUP205Q92621 2012 aa14.03□□□□□ -0.16
NUP188-211ENST00000550219 A0A1W2PQF6 199 aa14.03□□□□□ -0.16
NUP188-211ENST00000550219 EPHB6O15197 1021 aa14.03□□□□□ -0.16
NUP188-211ENST00000550219 CD19P15391 556 aa14.03□□□□□ -0.16
NUP188-211ENST00000550219 ITPKAP23677 461 aa14.03□□□□□ -0.16
NUP188-211ENST00000550219 SLC8A3P57103 927 aa14.03□□□□□ -0.16
NUP188-211ENST00000550219 YWHAGP61981 247 aaKnown RBP eCLIP14.03□□□□□ -0.16
NUP188-211ENST00000550219 APBA1Q02410 837 aa14.03□□□□□ -0.16
NUP188-211ENST00000550219 GCNT1Q02742 428 aa14.03□□□□□ -0.16
NUP188-211ENST00000550219 KIAA1211LQ6NV74 962 aa14.03□□□□□ -0.16
NUP188-211ENST00000550219 KLHDC10Q6PID8 442 aa14.03□□□□□ -0.16
NUP188-211ENST00000550219 SYT12Q8IV01 421 aa14.03□□□□□ -0.16
NUP188-211ENST00000550219 ARHGEF19Q8IW93 802 aa14.03□□□□□ -0.16
NUP188-211ENST00000550219 TTC39CQ8N584 583 aa14.03□□□□□ -0.16
NUP188-211ENST00000550219 KCNV2Q8TDN2 545 aa14.03□□□□□ -0.16
NUP188-211ENST00000550219 IPO4Q8TEX9 1081 aaKnown RBP14.03□□□□□ -0.16
NUP188-211ENST00000550219 IQCDQ96DY2 449 aa14.03□□□□□ -0.16
NUP188-211ENST00000550219 FAM81BQ96LP2 452 aa14.03□□□□□ -0.16
NUP188-211ENST00000550219 CDK5RAP1Q96SZ6 601 aaKnown RBP14.03□□□□□ -0.16
NUP188-211ENST00000550219 NUP58Q9BVL2 599 aa14.03□□□□□ -0.16
NUP188-211ENST00000550219 TTYH3Q9C0H2 523 aa14.03□□□□□ -0.16
NUP188-211ENST00000550219 FAM124BQ9H5Z6 455 aaPredicted RBP14.03□□□□□ -0.16
NUP188-211ENST00000550219 CLIC5Q9NZA1 410 aa14.03□□□□□ -0.16
NUP188-211ENST00000550219 EVLQ9UI08 416 aaPredicted RBP14.03□□□□□ -0.16
NUP188-211ENST00000550219 STRIP2Q9ULQ0 834 aa14.03□□□□□ -0.16
NUP188-211ENST00000550219 USP3Q9Y6I4 520 aa14.03□□□□□ -0.16
NUP188-211ENST00000550219 IGHV1OR15-9A0A0B4J2B8 117 aa14.02□□□□□ -0.17
NUP188-211ENST00000550219 SLC12A8A0AV02 714 aa14.02□□□□□ -0.17
NUP188-211ENST00000550219 CDX4O14627 284 aaPredicted RBP14.02□□□□□ -0.17
NUP188-211ENST00000550219 KLKB1P03952 638 aa14.02□□□□□ -0.17
NUP188-211ENST00000550219 UCHL3P15374 230 aa14.02□□□□□ -0.17
NUP188-211ENST00000550219 ENGP17813 658 aa14.02□□□□□ -0.17
NUP188-211ENST00000550219 TBXAS1P24557 533 aaPredicted RBP14.02□□□□□ -0.17
NUP188-211ENST00000550219 TKTL1P51854 596 aa14.02□□□□□ -0.17
NUP188-211ENST00000550219 LMAN2Q12907 356 aa14.02□□□□□ -0.17
NUP188-211ENST00000550219 LRMPQ12912 555 aa14.02□□□□□ -0.17
NUP188-211ENST00000550219 FOXC1Q12948 553 aa14.02□□□□□ -0.17
NUP188-211ENST00000550219 CUL2Q13617 745 aa14.02□□□□□ -0.17
NUP188-211ENST00000550219 SPECC1LQ69YQ0 1117 aa14.02□□□□□ -0.17
NUP188-211ENST00000550219 SLC36A4Q6YBV0 504 aa14.02□□□□□ -0.17
NUP188-211ENST00000550219 ENOSF1Q7L5Y1 443 aa14.02□□□□□ -0.17
NUP188-211ENST00000550219 CACUL1Q86Y37 369 aa14.02□□□□□ -0.17
NUP188-211ENST00000550219 DENND1CQ8IV53 801 aa14.02□□□□□ -0.17
NUP188-211ENST00000550219 ARHGAP18Q8N392 663 aa14.02□□□□□ -0.17
NUP188-211ENST00000550219 UBR7Q8N806 425 aa14.02□□□□□ -0.17
NUP188-211ENST00000550219 DEFB124Q8NES8 71 aa14.02□□□□□ -0.17
NUP188-211ENST00000550219 NEK11Q8NG66 645 aa14.02□□□□□ -0.17
NUP188-211ENST00000550219 P2RY11Q96G91 374 aa14.02□□□□□ -0.17
NUP188-211ENST00000550219 KREMEN1Q96MU8 473 aa14.02□□□□□ -0.17
NUP188-211ENST00000550219 GTPBP2Q9BX10 602 aaKnown RBP14.02□□□□□ -0.17
NUP188-211ENST00000550219 ULBP1Q9BZM6 244 aa14.02□□□□□ -0.17
NUP188-211ENST00000550219 EDEM3Q9BZQ6 932 aa14.02□□□□□ -0.17
NUP188-211ENST00000550219 FAM207AQ9NSI2 230 aaPredicted RBP14.02□□□□□ -0.17
NUP188-211ENST00000550219 MARCH2Q9P0N8 246 aa14.02□□□□□ -0.17
NUP188-211ENST00000550219 TSPAN16Q9UKR8 245 aa14.02□□□□□ -0.17
NUP188-211ENST00000550219 STARD13Q9Y3M8 1113 aa14.02□□□□□ -0.17
NUP188-211ENST00000550219 ABCA7Q8IZY2 2146 aa14.02□□□□□ -0.17
NUP188-211ENST00000550219 PLXND1Q9Y4D7 1925 aa14.02□□□□□ -0.17
NUP188-211ENST00000550219 A0A1W2PQJ5 194 aa14.01□□□□□ -0.17
NUP188-211ENST00000550219 WASH3PC4AMC7 463 aa14.01□□□□□ -0.17
NUP188-211ENST00000550219 TULP2O00295 520 aa14.01□□□□□ -0.17
NUP188-211ENST00000550219 ATXN3P54252 364 aaPredicted RBP14.01□□□□□ -0.17
NUP188-211ENST00000550219 BCAT1P54687 386 aa14.01□□□□□ -0.17
NUP188-211ENST00000550219 COG7P83436 770 aa14.01□□□□□ -0.17
NUP188-211ENST00000550219 PDE4CQ08493 712 aa14.01□□□□□ -0.17
NUP188-211ENST00000550219 ADIGQ0VDE8 80 aa14.01□□□□□ -0.17
NUP188-211ENST00000550219 TBX2Q13207 712 aaPredicted RBP14.01□□□□□ -0.17
NUP188-211ENST00000550219 SGO2Q562F6 1265 aa14.01□□□□□ -0.17
NUP188-211ENST00000550219 ARHGAP17Q68EM7 881 aa14.01□□□□□ -0.17
NUP188-211ENST00000550219 GJB7Q6PEY0 223 aa14.01□□□□□ -0.17
NUP188-211ENST00000550219 RRAGAQ7L523 313 aa14.01□□□□□ -0.17
NUP188-211ENST00000550219 PPM1KQ8N3J5 372 aa14.01□□□□□ -0.17
NUP188-211ENST00000550219 NDRG1Q92597 394 aaKnown RBP14.01□□□□□ -0.17
NUP188-211ENST00000550219 KAT5Q92993 513 aa14.01□□□□□ -0.17
NUP188-211ENST00000550219 PCMTD1Q96MG8 357 aaPredicted RBP14.01□□□□□ -0.17
NUP188-211ENST00000550219 HSPA12BQ96MM6 686 aa14.01□□□□□ -0.17
NUP188-211ENST00000550219 GABRG3Q99928 467 aa14.01□□□□□ -0.17
NUP188-211ENST00000550219 STK33Q9BYT3 514 aa14.01□□□□□ -0.17
NUP188-211ENST00000550219 DCLK3Q9C098 648 aa14.01□□□□□ -0.17
NUP188-211ENST00000550219 LRRC4Q9HBW1 653 aa14.01□□□□□ -0.17
NUP188-211ENST00000550219 UBE2TQ9NPD8 197 aaPredicted RBP14.01□□□□□ -0.17
NUP188-211ENST00000550219 HESX1Q9UBX0 185 aa14.01□□□□□ -0.17
NUP188-211ENST00000550219 DNAJC12Q9UKB3 198 aa14.01□□□□□ -0.17
NUP188-211ENST00000550219 AJAP1Q9UKB5 411 aaPredicted RBP14.01□□□□□ -0.17
NUP188-211ENST00000550219 ZNF510Q9Y2H8 683 aa14.01□□□□□ -0.17
NUP188-211ENST00000550219 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.01□□□□□ -0.17
NUP188-211ENST00000550219 FHOD1Q9Y613 1164 aa14.01□□□□□ -0.17
NUP188-211ENST00000550219 STON1Q9Y6Q2 735 aa14.01□□□□□ -0.17
NUP188-211ENST00000550219 NDUFS2O75306 463 aa14□□□□□ -0.17
NUP188-211ENST00000550219 ZNF217O75362 1048 aa14□□□□□ -0.17
NUP188-211ENST00000550219 CYBBP04839 570 aa14□□□□□ -0.17
NUP188-211ENST00000550219 CISD3P0C7P0 127 aa14□□□□□ -0.17
NUP188-211ENST00000550219 SPINK2P20155 84 aa14□□□□□ -0.17
NUP188-211ENST00000550219 CHKAP35790 457 aa14□□□□□ -0.17
NUP188-211ENST00000550219 DPP6P42658 865 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms