RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 DPYSL3Q14195 570 aa18.03■□□□□ 0.48
LETMD1-220ENST00000549686 GRIN2CQ14957 1233 aa18.03■□□□□ 0.48
LETMD1-220ENST00000549686 LONRF2Q1L5Z9 754 aa18.03■□□□□ 0.48
LETMD1-220ENST00000549686 PRSS36Q5K4E3 855 aa18.03■□□□□ 0.48
LETMD1-220ENST00000549686 ANKRD54Q6NXT1 300 aa18.03■□□□□ 0.48
LETMD1-220ENST00000549686 MFSD7Q6UXD7 560 aa18.03■□□□□ 0.48
LETMD1-220ENST00000549686 GRASPQ7Z6J2 395 aaPredicted RBP18.03■□□□□ 0.48
LETMD1-220ENST00000549686 GPR149Q86SP6 731 aa18.03■□□□□ 0.48
LETMD1-220ENST00000549686 DDX42Q86XP3 938 aaKnown RBP eCLIP18.03■□□□□ 0.48
LETMD1-220ENST00000549686 SHKBP1Q8TBC3 707 aa18.03■□□□□ 0.48
LETMD1-220ENST00000549686 EPAS1Q99814 870 aa18.03■□□□□ 0.48
LETMD1-220ENST00000549686 KLF16Q9BXK1 252 aaPredicted RBP18.03■□□□□ 0.48
LETMD1-220ENST00000549686 CALN1Q9BXU9 219 aa18.03■□□□□ 0.48
LETMD1-220ENST00000549686 MAK16Q9BXY0 300 aaKnown RBP18.03■□□□□ 0.48
LETMD1-220ENST00000549686 DCLK3Q9C098 648 aa18.03■□□□□ 0.48
LETMD1-220ENST00000549686 TASP1Q9H6P5 420 aa18.03■□□□□ 0.48
LETMD1-220ENST00000549686 KLHL11Q9NVR0 708 aa18.03■□□□□ 0.48
LETMD1-220ENST00000549686 HCFC1R1Q9NWW0 138 aa18.03■□□□□ 0.48
LETMD1-220ENST00000549686 MTCH2Q9Y6C9 303 aa18.03■□□□□ 0.48
LETMD1-220ENST00000549686 hCG_1818297A0A087WSY0 165 aa18.02■□□□□ 0.48
LETMD1-220ENST00000549686 GOLGA6L10A0A0M3HER8 536 aa18.02■□□□□ 0.48
LETMD1-220ENST00000549686 CKMP06732 381 aa18.02■□□□□ 0.48
LETMD1-220ENST00000549686 ZFXP17010 805 aaPredicted RBP18.02■□□□□ 0.48
LETMD1-220ENST00000549686 TUBB4BP68371 445 aa18.02■□□□□ 0.48
LETMD1-220ENST00000549686 CYP4F8P98187 520 aa18.02■□□□□ 0.48
LETMD1-220ENST00000549686 PPP6R3Q5H9R7 873 aaPredicted RBP18.02■□□□□ 0.48
LETMD1-220ENST00000549686 TXNDC8Q6A555 127 aa18.02■□□□□ 0.48
LETMD1-220ENST00000549686 GPR153Q6NV75 609 aa18.02■□□□□ 0.48
LETMD1-220ENST00000549686 TMC5Q6UXY8 1006 aa18.02■□□□□ 0.48
LETMD1-220ENST00000549686 TSC1Q92574 1164 aa18.02■□□□□ 0.48
LETMD1-220ENST00000549686 ACSF2Q96CM8 615 aaPredicted RBP18.02■□□□□ 0.48
LETMD1-220ENST00000549686 FAF2Q96CS3 445 aa18.02■□□□□ 0.48
LETMD1-220ENST00000549686 GAS2L1Q99501 681 aaPredicted RBP18.02■□□□□ 0.48
LETMD1-220ENST00000549686 HOMER3Q9NSC5 361 aa18.02■□□□□ 0.48
LETMD1-220ENST00000549686 GPATCH2LQ9NWQ4 482 aa18.02■□□□□ 0.48
LETMD1-220ENST00000549686 MRPS23Q9Y3D9 190 aaKnown RBP18.02■□□□□ 0.48
LETMD1-220ENST00000549686 ZNF638Q14966 1978 aaKnown RBP18.02■□□□□ 0.47
LETMD1-220ENST00000549686 MYO7AQ13402 2215 aa18.02■□□□□ 0.47
LETMD1-220ENST00000549686 LAMA3Q16787 3333 aa18.01■□□□□ 0.47
LETMD1-220ENST00000549686 CTAGE15A4D2H0 777 aa18.01■□□□□ 0.47
LETMD1-220ENST00000549686 PI4K2BG5E9Z4 385 aa18.01■□□□□ 0.47
LETMD1-220ENST00000549686 PAGE1O75459 146 aa18.01■□□□□ 0.47
LETMD1-220ENST00000549686 GLP2RO95838 553 aa18.01■□□□□ 0.47
LETMD1-220ENST00000549686 CTAGE8P0CG41 777 aa18.01■□□□□ 0.47
LETMD1-220ENST00000549686 WEE1P30291 646 aa18.01■□□□□ 0.47
LETMD1-220ENST00000549686 GTF2F1P35269 517 aaKnown RBP eCLIP18.01■□□□□ 0.47
LETMD1-220ENST00000549686 SLC11A2P49281 568 aa18.01■□□□□ 0.47
LETMD1-220ENST00000549686 CA9Q16790 459 aa18.01■□□□□ 0.47
LETMD1-220ENST00000549686 GPR158Q5T848 1215 aa18.01■□□□□ 0.47
LETMD1-220ENST00000549686 CTAGE6Q86UF2 777 aa18.01■□□□□ 0.47
LETMD1-220ENST00000549686 CTAGE4Q8IX94 777 aa18.01■□□□□ 0.47
LETMD1-220ENST00000549686 ARL14EPQ8N8R7 260 aaPredicted RBP18.01■□□□□ 0.47
LETMD1-220ENST00000549686 MAB21L3Q8N8X9 362 aa18.01■□□□□ 0.47
LETMD1-220ENST00000549686 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.01■□□□□ 0.47
LETMD1-220ENST00000549686 MS4A14Q96JA4 679 aa18.01■□□□□ 0.47
LETMD1-220ENST00000549686 RNF157Q96PX1 679 aa18.01■□□□□ 0.47
LETMD1-220ENST00000549686 KCTD15Q96SI1 283 aaPredicted RBP18.01■□□□□ 0.47
LETMD1-220ENST00000549686 DDX50Q9BQ39 737 aaKnown RBP18.01■□□□□ 0.47
LETMD1-220ENST00000549686 FRMD8P1Q9BZ68 369 aaPredicted RBP18.01■□□□□ 0.47
LETMD1-220ENST00000549686 RNF38Q9H0F5 515 aa18.01■□□□□ 0.47
LETMD1-220ENST00000549686 MTMR10Q9NXD2 777 aa18.01■□□□□ 0.47
LETMD1-220ENST00000549686 OR12D3Q9UGF7 316 aa18.01■□□□□ 0.47
LETMD1-220ENST00000549686 ARHGAP26Q9UNA1 814 aa18.01■□□□□ 0.47
LETMD1-220ENST00000549686 ZNF510Q9Y2H8 683 aa18.01■□□□□ 0.47
LETMD1-220ENST00000549686 CCDC188H7C350 402 aa18■□□□□ 0.47
LETMD1-220ENST00000549686 EEF2KO00418 725 aaKnown RBP18■□□□□ 0.47
LETMD1-220ENST00000549686 MOSPD3O75425 235 aa18■□□□□ 0.47
LETMD1-220ENST00000549686 AVPR1AP37288 418 aa18■□□□□ 0.47
LETMD1-220ENST00000549686 CCR2P41597 374 aa18■□□□□ 0.47
LETMD1-220ENST00000549686 MLLT6P55198 1093 aaPredicted RBP18■□□□□ 0.47
LETMD1-220ENST00000549686 RBM10P98175 930 aaKnown RBP18■□□□□ 0.47
LETMD1-220ENST00000549686 SEMA3BQ13214 749 aa18■□□□□ 0.47
LETMD1-220ENST00000549686 KLF1Q13351 362 aaPredicted RBP18■□□□□ 0.47
LETMD1-220ENST00000549686 COL19A1Q14993 1142 aa18■□□□□ 0.47
LETMD1-220ENST00000549686 TEAD2Q15562 447 aa18■□□□□ 0.47
LETMD1-220ENST00000549686 CTC1Q2NKJ3 1217 aa18■□□□□ 0.47
LETMD1-220ENST00000549686 RARS2Q5T160 578 aaKnown RBP18■□□□□ 0.47
LETMD1-220ENST00000549686 CES5AQ6NT32 575 aa18■□□□□ 0.47
LETMD1-220ENST00000549686 LRRC31Q6UY01 552 aa18■□□□□ 0.47
LETMD1-220ENST00000549686 BBS12Q6ZW61 710 aa18■□□□□ 0.47
LETMD1-220ENST00000549686 C12orf76Q8N812 135 aaPredicted RBP18■□□□□ 0.47
LETMD1-220ENST00000549686 TTC13Q8NBP0 860 aa18■□□□□ 0.47
LETMD1-220ENST00000549686 CSPG4P5Q96PW8 444 aa18■□□□□ 0.47
LETMD1-220ENST00000549686 SLC46A2Q9BY10 475 aa18■□□□□ 0.47
LETMD1-220ENST00000549686 ADAM7Q9H2U9 754 aa18■□□□□ 0.47
LETMD1-220ENST00000549686 ANLNQ9NQW6 1124 aa18■□□□□ 0.47
LETMD1-220ENST00000549686 DONSONQ9NYP3 566 aa18■□□□□ 0.47
LETMD1-220ENST00000549686 STIM2Q9P246 746 aa18■□□□□ 0.47
LETMD1-220ENST00000549686 LSM7Q9UK45 103 aaKnown RBP18■□□□□ 0.47
LETMD1-220ENST00000549686 KRIT1O00522 736 aa17.99■□□□□ 0.47
LETMD1-220ENST00000549686 STC2O76061 302 aa17.99■□□□□ 0.47
LETMD1-220ENST00000549686 SLU7O95391 586 aaKnown RBP17.99■□□□□ 0.47
LETMD1-220ENST00000549686 MOCS2O96007 188 aaPredicted RBP17.99■□□□□ 0.47
LETMD1-220ENST00000549686 HMBSP08397 361 aa17.99■□□□□ 0.47
LETMD1-220ENST00000549686 CD48P09326 243 aa17.99■□□□□ 0.47
LETMD1-220ENST00000549686 IL4RP24394 825 aa17.99■□□□□ 0.47
LETMD1-220ENST00000549686 TPI1P60174 286 aa17.99■□□□□ 0.47
LETMD1-220ENST00000549686 SLC5A9Q2M3M2 681 aa17.99■□□□□ 0.47
LETMD1-220ENST00000549686 ANKRD20A8PQ5CZ79 823 aa17.99■□□□□ 0.47
LETMD1-220ENST00000549686 ATAT1Q5SQI0 421 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms