RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 RNF8O76064 485 aa22.01■■□□□ 1.11
VPS29-206ENST00000549578 TRIM68Q6AZZ1 485 aa22.01■■□□□ 1.11
VPS29-206ENST00000549578 SCYL2Q6P3W7 929 aa22.01■■□□□ 1.11
VPS29-206ENST00000549578 SLC44A3Q8N4M1 653 aa22.01■■□□□ 1.11
VPS29-206ENST00000549578 NIPA2Q8N8Q9 360 aa22.01■■□□□ 1.11
VPS29-206ENST00000549578 NECAB3Q96P71 396 aaPredicted RBP22.01■■□□□ 1.11
VPS29-206ENST00000549578 TKTL2Q9H0I9 626 aa22.01■■□□□ 1.11
VPS29-206ENST00000549578 LINC00597Q9H2U6 94 aa22.01■■□□□ 1.11
VPS29-206ENST00000549578 THG1LQ9NWX6 298 aaKnown RBP22.01■■□□□ 1.11
VPS29-206ENST00000549578 PYCARDQ9ULZ3 195 aa22.01■■□□□ 1.11
VPS29-206ENST00000549578 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.01■■□□□ 1.11
VPS29-206ENST00000549578 VCANP13611 3396 aa22.01■■□□□ 1.11
VPS29-206ENST00000549578 KIF26AQ9ULI4 1882 aaPredicted RBP22■■□□□ 1.11
VPS29-206ENST00000549578 MACROD2A1Z1Q3 448 aa22■■□□□ 1.11
VPS29-206ENST00000549578 PROSCO94903 275 aa22■■□□□ 1.11
VPS29-206ENST00000549578 SLC2A3P11169 496 aa22■■□□□ 1.11
VPS29-206ENST00000549578 GDI1P31150 447 aa22■■□□□ 1.11
VPS29-206ENST00000549578 HADHBP55084 474 aaKnown RBP22■■□□□ 1.11
VPS29-206ENST00000549578 NAP1L1P55209 391 aaKnown RBP22■■□□□ 1.11
VPS29-206ENST00000549578 TJAP1Q5JTD0 557 aa22■■□□□ 1.11
VPS29-206ENST00000549578 BRMS1LQ5PSV4 323 aa22■■□□□ 1.11
VPS29-206ENST00000549578 CCDC185Q8N715 623 aa22■■□□□ 1.11
VPS29-206ENST00000549578 TRMT61BQ9BVS5 477 aaKnown RBP22■■□□□ 1.11
VPS29-206ENST00000549578 DUS2Q9NX74 493 aaKnown RBP22■■□□□ 1.11
VPS29-206ENST00000549578 ARHGEF38Q9NXL2 777 aa22■■□□□ 1.11
VPS29-206ENST00000549578 MIPP30301 263 aa21.99■■□□□ 1.11
VPS29-206ENST00000549578 ARHGAP25P42331 645 aa21.99■■□□□ 1.11
VPS29-206ENST00000549578 ACAP1Q15027 740 aa21.99■■□□□ 1.11
VPS29-206ENST00000549578 ATP6V0D2Q8N8Y2 350 aa21.99■■□□□ 1.11
VPS29-206ENST00000549578 OSCP1Q8WVF1 389 aa21.99■■□□□ 1.11
VPS29-206ENST00000549578 BTN2A3PQ96KV6 586 aa21.99■■□□□ 1.11
VPS29-206ENST00000549578 GOLPH3Q9H4A6 298 aa21.99■■□□□ 1.11
VPS29-206ENST00000549578 LZTFL1Q9NQ48 299 aa21.99■■□□□ 1.11
VPS29-206ENST00000549578 PCSK1NQ9UHG2 260 aa21.99■■□□□ 1.11
VPS29-206ENST00000549578 PAXBP1Q9Y5B6 917 aa21.99■■□□□ 1.11
VPS29-206ENST00000549578 GOLGA6L7A0A1B0GV03 622 aa21.98■■□□□ 1.11
VPS29-206ENST00000549578 ACSL4O60488 711 aa21.98■■□□□ 1.11
VPS29-206ENST00000549578 BUB1BO60566 1050 aaPredicted RBP21.98■■□□□ 1.11
VPS29-206ENST00000549578 TCF4P15884 667 aa21.98■■□□□ 1.11
VPS29-206ENST00000549578 IFNAR2P48551 515 aa21.98■■□□□ 1.11
VPS29-206ENST00000549578 SLC11A2P49281 568 aa21.98■■□□□ 1.11
VPS29-206ENST00000549578 VCPP55072 806 aaKnown RBP21.98■■□□□ 1.11
VPS29-206ENST00000549578 ARHGAP29Q52LW3 1261 aa21.98■■□□□ 1.11
VPS29-206ENST00000549578 NADSYN1Q6IA69 706 aa21.98■■□□□ 1.11
VPS29-206ENST00000549578 TPCN2Q8NHX9 752 aa21.98■■□□□ 1.11
VPS29-206ENST00000549578 PEBP4Q96S96 227 aa21.98■■□□□ 1.11
VPS29-206ENST00000549578 FAM83CQ9BQN1 747 aa21.98■■□□□ 1.11
VPS29-206ENST00000549578 TSGA10Q9BZW7 698 aa21.98■■□□□ 1.11
VPS29-206ENST00000549578 EBF3Q9H4W6 596 aa21.98■■□□□ 1.11
VPS29-206ENST00000549578 CD320Q9NPF0 282 aa21.98■■□□□ 1.11
VPS29-206ENST00000549578 TBC1D14Q9P2M4 693 aa21.98■■□□□ 1.11
VPS29-206ENST00000549578 SLC12A6Q9UHW9 1150 aa21.98■■□□□ 1.11
VPS29-206ENST00000549578 ZNF510Q9Y2H8 683 aa21.98■■□□□ 1.11
VPS29-206ENST00000549578 SLC9A3R1O14745 358 aaPredicted RBP21.97■■□□□ 1.11
VPS29-206ENST00000549578 CHADO15335 359 aa21.97■■□□□ 1.11
VPS29-206ENST00000549578 PAGE1O75459 146 aa21.97■■□□□ 1.11
VPS29-206ENST00000549578 ARSAP15289 507 aa21.97■■□□□ 1.11
VPS29-206ENST00000549578 PCK1P35558 622 aa21.97■■□□□ 1.11
VPS29-206ENST00000549578 GGCXP38435 758 aa21.97■■□□□ 1.11
VPS29-206ENST00000549578 TNK2Q07912 1038 aa21.97■■□□□ 1.11
VPS29-206ENST00000549578 EML3Q32P44 896 aa21.97■■□□□ 1.11
VPS29-206ENST00000549578 FAM133BQ5BKY9 247 aaKnown RBP21.97■■□□□ 1.11
VPS29-206ENST00000549578 GJD3Q8N144 294 aa21.97■■□□□ 1.11
VPS29-206ENST00000549578 KIAA1958Q8N8K9 716 aa21.97■■□□□ 1.11
VPS29-206ENST00000549578 BRD9Q9H8M2 597 aa21.97■■□□□ 1.11
VPS29-206ENST00000549578 TMEM51Q9NW97 253 aa21.97■■□□□ 1.11
VPS29-206ENST00000549578 LCMT1Q9UIC8 334 aa21.97■■□□□ 1.11
VPS29-206ENST00000549578 GUCA1BQ9UMX6 200 aa21.97■■□□□ 1.11
VPS29-206ENST00000549578 HYOU1Q9Y4L1 999 aa21.97■■□□□ 1.11
VPS29-206ENST00000549578 SNX10Q9Y5X0 201 aa21.97■■□□□ 1.11
VPS29-206ENST00000549578 TRDMT1O14717 391 aaKnown RBP21.96■■□□□ 1.11
VPS29-206ENST00000549578 NARSO43776 548 aaKnown RBP21.96■■□□□ 1.11
VPS29-206ENST00000549578 KRT86O43790 486 aa21.96■■□□□ 1.11
VPS29-206ENST00000549578 MOCS3O95396 460 aa21.96■■□□□ 1.11
VPS29-206ENST00000549578 LATS1O95835 1130 aa21.96■■□□□ 1.11
VPS29-206ENST00000549578 MAN1A1P33908 653 aa21.96■■□□□ 1.11
VPS29-206ENST00000549578 ADRA1BP35368 520 aa21.96■■□□□ 1.11
VPS29-206ENST00000549578 SSR1P43307 286 aaKnown RBP21.96■■□□□ 1.11
VPS29-206ENST00000549578 TDGQ13569 410 aa21.96■■□□□ 1.11
VPS29-206ENST00000549578 ADGRF1Q5T601 910 aa21.96■■□□□ 1.11
VPS29-206ENST00000549578 PIK3R6Q5UE93 754 aa21.96■■□□□ 1.11
VPS29-206ENST00000549578 RNF135Q8IUD6 432 aa21.96■■□□□ 1.11
VPS29-206ENST00000549578 AZIN2Q96A70 460 aa21.96■■□□□ 1.11
VPS29-206ENST00000549578 STOML2Q9UJZ1 356 aa21.96■■□□□ 1.11
VPS29-206ENST00000549578 USP18Q9UMW8 372 aa21.96■■□□□ 1.11
VPS29-206ENST00000549578 HS3ST4Q9Y661 456 aa21.96■■□□□ 1.11
VPS29-206ENST00000549578 PRPSAP2O60256 369 aa21.96■■□□□ 1.11
VPS29-206ENST00000549578 IL1R2P27930 398 aa21.96■■□□□ 1.11
VPS29-206ENST00000549578 SLC6A4P31645 630 aa21.96■■□□□ 1.11
VPS29-206ENST00000549578 PDGFRLQ15198 375 aa21.96■■□□□ 1.11
VPS29-206ENST00000549578 ARL13BQ3SXY8 428 aa21.96■■□□□ 1.11
VPS29-206ENST00000549578 MS4A13Q5J8X5 152 aa21.96■■□□□ 1.11
VPS29-206ENST00000549578 RAP1GAP2Q684P5 730 aa21.96■■□□□ 1.11
VPS29-206ENST00000549578 RFWD3Q6PCD5 774 aa21.96■■□□□ 1.11
VPS29-206ENST00000549578 ZNF662Q6ZS27 426 aa21.96■■□□□ 1.11
VPS29-206ENST00000549578 CYP4V2Q6ZWL3 525 aaPredicted RBP21.96■■□□□ 1.11
VPS29-206ENST00000549578 SLFN11Q7Z7L1 901 aa21.96■■□□□ 1.11
VPS29-206ENST00000549578 ADGRG2Q8IZP9 1017 aa21.96■■□□□ 1.11
VPS29-206ENST00000549578 NTAN1Q96AB6 310 aa21.96■■□□□ 1.11
VPS29-206ENST00000549578 OTUB2Q96DC9 234 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms