RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 ZNF366Q8N895 744 aa11.34□□□□□ -0.59
TRAFD1-206ENST00000549358 RBBP8NLQ8NC74 664 aaPredicted RBP11.34□□□□□ -0.59
TRAFD1-206ENST00000549358 DDI1Q8WTU0 396 aa11.34□□□□□ -0.59
TRAFD1-206ENST00000549358 ELF4Q99607 663 aaPredicted RBP11.34□□□□□ -0.59
TRAFD1-206ENST00000549358 ORAI3Q9BRQ5 295 aa11.34□□□□□ -0.59
TRAFD1-206ENST00000549358 SDCBP2Q9H190 292 aa11.34□□□□□ -0.59
TRAFD1-206ENST00000549358 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.34□□□□□ -0.59
TRAFD1-206ENST00000549358 NAGPAQ9UK23 515 aa11.34□□□□□ -0.59
TRAFD1-206ENST00000549358 ZNF510Q9Y2H8 683 aa11.34□□□□□ -0.59
TRAFD1-206ENST00000549358 FAM47DPA6NHR8 397 aa11.33□□□□□ -0.6
TRAFD1-206ENST00000549358 B8ZZF3 427 aa11.33□□□□□ -0.6
TRAFD1-206ENST00000549358 CLIC2O15247 247 aa11.33□□□□□ -0.6
TRAFD1-206ENST00000549358 IGHV4-34P06331 123 aa11.33□□□□□ -0.6
TRAFD1-206ENST00000549358 CYP2J2P51589 502 aa11.33□□□□□ -0.6
TRAFD1-206ENST00000549358 RPS14P62263 151 aaKnown RBP11.33□□□□□ -0.6
TRAFD1-206ENST00000549358 RACK1P63244 317 aaKnown RBP11.33□□□□□ -0.6
TRAFD1-206ENST00000549358 CYP24A1Q07973 514 aa11.33□□□□□ -0.6
TRAFD1-206ENST00000549358 SHBQ15464 509 aa11.33□□□□□ -0.6
TRAFD1-206ENST00000549358 ZNF699Q32M78 642 aa11.33□□□□□ -0.6
TRAFD1-206ENST00000549358 FNDC3BQ53EP0 1204 aaKnown RBP11.33□□□□□ -0.6
TRAFD1-206ENST00000549358 ZNF667Q5HYK9 610 aa11.33□□□□□ -0.6
TRAFD1-206ENST00000549358 SCARA5Q6ZMJ2 495 aa11.33□□□□□ -0.6
TRAFD1-206ENST00000549358 STXBP4Q6ZWJ1 553 aa11.33□□□□□ -0.6
TRAFD1-206ENST00000549358 TADA2BQ86TJ2 420 aa11.33□□□□□ -0.6
TRAFD1-206ENST00000549358 ERICH1Q86X53 443 aa11.33□□□□□ -0.6
TRAFD1-206ENST00000549358 DENND1CQ8IV53 801 aa11.33□□□□□ -0.6
TRAFD1-206ENST00000549358 CCDC65Q8IXS2 484 aa11.33□□□□□ -0.6
TRAFD1-206ENST00000549358 C12orf29Q8N999 325 aa11.33□□□□□ -0.6
TRAFD1-206ENST00000549358 SAP25Q8TEE9 199 aa11.33□□□□□ -0.6
TRAFD1-206ENST00000549358 CYB5D2Q8WUJ1 264 aa11.33□□□□□ -0.6
TRAFD1-206ENST00000549358 TSC1Q92574 1164 aa11.33□□□□□ -0.6
TRAFD1-206ENST00000549358 NAF1Q96HR8 494 aaKnown RBP11.33□□□□□ -0.6
TRAFD1-206ENST00000549358 SLC6A18Q96N87 628 aa11.33□□□□□ -0.6
TRAFD1-206ENST00000549358 SEMA4CQ9C0C4 833 aa11.33□□□□□ -0.6
TRAFD1-206ENST00000549358 FAM49BQ9NUQ9 324 aa11.33□□□□□ -0.6
TRAFD1-206ENST00000549358 AGO1Q9UL18 857 aaKnown RBP11.33□□□□□ -0.6
TRAFD1-206ENST00000549358 PLA2G4CQ9UP65 541 aa11.33□□□□□ -0.6
TRAFD1-206ENST00000549358 MAST4O15021 2626 aa11.33□□□□□ -0.6
TRAFD1-206ENST00000549358 ATMQ13315 3056 aa11.32□□□□□ -0.6
TRAFD1-206ENST00000549358 GLDCP23378 1020 aa11.32□□□□□ -0.6
TRAFD1-206ENST00000549358 ADORA2BP29275 332 aa11.32□□□□□ -0.6
TRAFD1-206ENST00000549358 CORO1AP31146 461 aaKnown RBP11.32□□□□□ -0.6
TRAFD1-206ENST00000549358 TXLNAP40222 546 aa11.32□□□□□ -0.6
TRAFD1-206ENST00000549358 CASP4P49662 377 aa11.32□□□□□ -0.6
TRAFD1-206ENST00000549358 NDST1P52848 882 aa11.32□□□□□ -0.6
TRAFD1-206ENST00000549358 COG7P83436 770 aa11.32□□□□□ -0.6
TRAFD1-206ENST00000549358 BIRC3Q13489 604 aa11.32□□□□□ -0.6
TRAFD1-206ENST00000549358 LY6DQ14210 128 aa11.32□□□□□ -0.6
TRAFD1-206ENST00000549358 BMT2Q1RMZ1 405 aa11.32□□□□□ -0.6
TRAFD1-206ENST00000549358 TBC1D25Q3MII6 688 aa11.32□□□□□ -0.6
TRAFD1-206ENST00000549358 ARHGAP40Q5TG30 622 aa11.32□□□□□ -0.6
TRAFD1-206ENST00000549358 KIAA0895LQ68EN5 471 aa11.32□□□□□ -0.6
TRAFD1-206ENST00000549358 CLEC20AQ6ZU45 233 aa11.32□□□□□ -0.6
TRAFD1-206ENST00000549358 SCD5Q86SK9 330 aa11.32□□□□□ -0.6
TRAFD1-206ENST00000549358 CRYBG2Q8N1P7 616 aa11.32□□□□□ -0.6
TRAFD1-206ENST00000549358 GANCQ8TET4 914 aa11.32□□□□□ -0.6
TRAFD1-206ENST00000549358 SKA1Q96BD8 255 aa11.32□□□□□ -0.6
TRAFD1-206ENST00000549358 CLIC6Q96NY7 704 aa11.32□□□□□ -0.6
TRAFD1-206ENST00000549358 LGMNQ99538 433 aa11.32□□□□□ -0.6
TRAFD1-206ENST00000549358 SLC2A11Q9BYW1 496 aa11.32□□□□□ -0.6
TRAFD1-206ENST00000549358 DCLK3Q9C098 648 aa11.32□□□□□ -0.6
TRAFD1-206ENST00000549358 GZF1Q9H116 711 aaPredicted RBP11.32□□□□□ -0.6
TRAFD1-206ENST00000549358 TMEM245Q9H330 911 aa11.32□□□□□ -0.6
TRAFD1-206ENST00000549358 SGK2Q9HBY8 427 aa11.32□□□□□ -0.6
TRAFD1-206ENST00000549358 CPNE5Q9HCH3 593 aa11.32□□□□□ -0.6
TRAFD1-206ENST00000549358 PRSS16Q9NQE7 514 aa11.32□□□□□ -0.6
TRAFD1-206ENST00000549358 AGPAT3Q9NRZ7 376 aa11.32□□□□□ -0.6
TRAFD1-206ENST00000549358 HMGXB4Q9UGU5 601 aa11.32□□□□□ -0.6
TRAFD1-206ENST00000549358 RASAL2Q9UJF2 1139 aa11.32□□□□□ -0.6
TRAFD1-206ENST00000549358 FBXO2Q9UK22 296 aaPredicted RBP11.32□□□□□ -0.6
TRAFD1-206ENST00000549358 CLCA2Q9UQC9 943 aa11.32□□□□□ -0.6
TRAFD1-206ENST00000549358 CLIC4Q9Y696 253 aa11.32□□□□□ -0.6
TRAFD1-206ENST00000549358 ASXL3Q9C0F0 2248 aa11.32□□□□□ -0.6
TRAFD1-206ENST00000549358 ZNF462Q96JM2 2506 aa11.32□□□□□ -0.6
TRAFD1-206ENST00000549358 TMEM131Q92545 1883 aa11.32□□□□□ -0.6
TRAFD1-206ENST00000549358 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.31□□□□□ -0.6
TRAFD1-206ENST00000549358 A0A1W2PPC4 97 aa11.31□□□□□ -0.6
TRAFD1-206ENST00000549358 HHLA1C9JL84 531 aa11.31□□□□□ -0.6
TRAFD1-206ENST00000549358 TGFB1I1O43294 461 aa11.31□□□□□ -0.6
TRAFD1-206ENST00000549358 WNT1P04628 370 aa11.31□□□□□ -0.6
TRAFD1-206ENST00000549358 FAM200BP0CF97 657 aa11.31□□□□□ -0.6
TRAFD1-206ENST00000549358 RALAP11233 206 aa11.31□□□□□ -0.6
TRAFD1-206ENST00000549358 STAT6P42226 847 aa11.31□□□□□ -0.6
TRAFD1-206ENST00000549358 RHDQ02161 417 aa11.31□□□□□ -0.6
TRAFD1-206ENST00000549358 ZBTB16Q05516 673 aa11.31□□□□□ -0.6
TRAFD1-206ENST00000549358 EFEMP1Q12805 493 aa11.31□□□□□ -0.6
TRAFD1-206ENST00000549358 BROXQ5VW32 411 aa11.31□□□□□ -0.6
TRAFD1-206ENST00000549358 CCDC73Q6ZRK6 1079 aa11.31□□□□□ -0.6
TRAFD1-206ENST00000549358 XXYLT1Q8NBI6 393 aa11.31□□□□□ -0.6
TRAFD1-206ENST00000549358 ZNF248Q8NDW4 579 aa11.31□□□□□ -0.6
TRAFD1-206ENST00000549358 WBP1Q96G27 269 aa11.31□□□□□ -0.6
TRAFD1-206ENST00000549358 VRTNQ9H8Y1 702 aa11.31□□□□□ -0.6
TRAFD1-206ENST00000549358 EBF2Q9HAK2 575 aa11.31□□□□□ -0.6
TRAFD1-206ENST00000549358 AASDHPPTQ9NRN7 309 aa11.31□□□□□ -0.6
TRAFD1-206ENST00000549358 NCKAP1Q9Y2A7 1128 aa11.31□□□□□ -0.6
TRAFD1-206ENST00000549358 PCDHA5Q9Y5H7 936 aa11.31□□□□□ -0.6
TRAFD1-206ENST00000549358 COL5A1P20908 1838 aaPredicted RBP11.3□□□□□ -0.6
TRAFD1-206ENST00000549358 KIF20AO95235 890 aa11.3□□□□□ -0.6
TRAFD1-206ENST00000549358 WISP1O95388 367 aa11.3□□□□□ -0.6
TRAFD1-206ENST00000549358 C6P13671 934 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms