RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 GAB4Q2WGN9 574 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 ARHGAP29Q52LW3 1261 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 INO80DQ53TQ3 878 aaPredicted RBP5.1□□□□□ -1.59
SCAF11-212ENST00000549162 VPS36Q86VN1 386 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 MPP5Q8N3R9 675 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 SH2D3CQ8N5H7 860 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 TMEM35BQ8NCS4 154 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 MZB1Q8WU39 189 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 SNRNP27Q8WVK2 155 aaKnown RBP5.1□□□□□ -1.59
SCAF11-212ENST00000549162 ZNF606Q8WXB4 792 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 TRIM43Q96BQ3 446 aaPredicted RBP5.1□□□□□ -1.59
SCAF11-212ENST00000549162 HHIPQ96QV1 700 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 DCLK3Q9C098 648 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 BCAS3Q9H6U6 928 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 SLC39A2Q9NP94 309 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 CISHQ9NSE2 258 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 HACD3Q9P035 362 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 CPA4Q9UI42 421 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 IGLV3-16A0A075B6K0 115 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 A0A087WZ62 844 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 NPHP3-ACAD11A0A0J9YXS1 232 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 TRIM49BA6NDI0 452 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 UPK3BL1B0FP48 263 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 UPK3BL2E5RIL1 263 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 SLC16A4O15374 487 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 KCNJ13O60928 360 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 MOSPD3O75425 235 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 FKBP9O95302 570 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 TRUB2O95900 331 aaKnown RBP5.1□□□□□ -1.59
SCAF11-212ENST00000549162 GALTP07902 379 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 CCNCP24863 283 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 MRPS5P82675 430 aaKnown RBP5.1□□□□□ -1.59
SCAF11-212ENST00000549162 SKOR1P84550 965 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 RNASELQ05823 741 aaKnown RBP5.1□□□□□ -1.59
SCAF11-212ENST00000549162 PDCLQ13371 301 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 HABP4Q5JVS0 413 aaKnown RBP5.1□□□□□ -1.59
SCAF11-212ENST00000549162 KIAA1841Q6NSI8 718 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 HIBCHQ6NVY1 386 aaPredicted RBP5.1□□□□□ -1.59
SCAF11-212ENST00000549162 EMBQ6PCB8 327 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 BZW1Q7L1Q6 419 aaKnown RBP5.1□□□□□ -1.59
SCAF11-212ENST00000549162 FUKQ8N0W3 1084 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 IFT43Q96FT9 208 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 RHOVQ96L33 236 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 ZIC5Q96T25 663 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 FDXACB1Q9BRP7 624 aaPredicted RBP5.1□□□□□ -1.59
SCAF11-212ENST00000549162 TNKS2Q9H2K2 1166 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 AAASQ9NRG9 546 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 HESX1Q9UBX0 185 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 CYTH4Q9UIA0 394 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 TRHDEQ9UKU6 1024 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 COG5Q9UP83 839 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 AP1M2Q9Y6Q5 423 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 hCG_1818297A0A087WSY0 165 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 E2F8A0AVK6 867 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 CCDC151A5D8V7 595 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 A6NJY4 79 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 ALG1L2C9J202 215 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 TRDMT1O14717 391 aaKnown RBP5.09□□□□□ -1.59
SCAF11-212ENST00000549162 PHF2O75151 1096 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 LUC7L3O95232 432 aaKnown RBP5.09□□□□□ -1.59
SCAF11-212ENST00000549162 TDGF1P13385 188 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 ITGA4P13612 1032 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 PRKCHP24723 683 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 CNTFP26441 200 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 CASP14P31944 242 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 SOX4Q06945 474 aaPredicted RBP5.09□□□□□ -1.59
SCAF11-212ENST00000549162 NR1D2Q14995 579 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 CCDC85BQ15834 202 aaPredicted RBP5.09□□□□□ -1.59
SCAF11-212ENST00000549162 ZDHHC20Q5W0Z9 365 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 PACS1Q6VY07 963 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 CLEC20AQ6ZU45 233 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 NEK10Q6ZWH5 1172 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 NECAB2Q7Z6G3 386 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 OSTM1Q86WC4 334 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 MFN1Q8IWA4 741 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 TAS1R2Q8TE23 839 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 U2AF1L4Q8WU68 220 aaKnown RBP5.09□□□□□ -1.59
SCAF11-212ENST00000549162 KRT35Q92764 455 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 GLT1D1Q96MS3 346 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 RAD9AQ99638 391 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 GORASP1Q9BQQ3 440 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 UCK1Q9HA47 277 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 CASS4Q9NQ75 786 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 CRTAC1Q9NQ79 661 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 SEMA5BQ9P283 1151 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 CTDP1Q9Y5B0 961 aaPredicted RBP5.09□□□□□ -1.59
SCAF11-212ENST00000549162 TCAF2A6NFQ2 919 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 LOC730098B7Z3J9 87 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 APOC4-APOC2K7ER74 178 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 KLK8O60259 260 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 PPFIA3O75145 1194 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 GJB5O95377 273 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 APOC2P02655 101 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 THP07101 528 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 PGK2P07205 417 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 RPS3P23396 243 aaKnown RBP eCLIP5.09□□□□□ -1.59
SCAF11-212ENST00000549162 NUMBP49757 651 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 KCNJ11Q14654 390 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 AGBL2Q5U5Z8 902 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 SCARA3Q6AZY7 606 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms