RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 NOX5Q96PH1 765 aa11.87□□□□□ -0.51
BEST3-209ENST00000548658 CRACR2AQ9BSW2 395 aa11.87□□□□□ -0.51
BEST3-209ENST00000548658 SLC4A5Q9BY07 1137 aa11.87□□□□□ -0.51
BEST3-209ENST00000548658 MIS12Q9H081 205 aa11.87□□□□□ -0.51
BEST3-209ENST00000548658 ZDHHC4Q9NPG8 344 aa11.87□□□□□ -0.51
BEST3-209ENST00000548658 TYW5A2RUC4 315 aaKnown RBP11.86□□□□□ -0.51
BEST3-209ENST00000548658 PIK3R2O00459 728 aa11.86□□□□□ -0.51
BEST3-209ENST00000548658 KHNYNO15037 678 aaKnown RBP11.86□□□□□ -0.51
BEST3-209ENST00000548658 THAP12O43422 761 aa11.86□□□□□ -0.51
BEST3-209ENST00000548658 SYNCRIPO60506 623 aaKnown RBP11.86□□□□□ -0.51
BEST3-209ENST00000548658 IGLV3-27P01718 113 aa11.86□□□□□ -0.51
BEST3-209ENST00000548658 GABRG2P18507 467 aa11.86□□□□□ -0.51
BEST3-209ENST00000548658 PON1P27169 355 aa11.86□□□□□ -0.51
BEST3-209ENST00000548658 HOXD12P35452 270 aa11.86□□□□□ -0.51
BEST3-209ENST00000548658 USP8P40818 1118 aa11.86□□□□□ -0.51
BEST3-209ENST00000548658 DHPSP49366 369 aaPredicted RBP11.86□□□□□ -0.51
BEST3-209ENST00000548658 TBX4P57082 545 aa11.86□□□□□ -0.51
BEST3-209ENST00000548658 BPIFB4P59827 614 aa11.86□□□□□ -0.51
BEST3-209ENST00000548658 PDAP1Q13442 181 aaKnown RBP11.86□□□□□ -0.51
BEST3-209ENST00000548658 SF3A2Q15428 464 aaKnown RBP11.86□□□□□ -0.51
BEST3-209ENST00000548658 GEN1Q17RS7 908 aa11.86□□□□□ -0.51
BEST3-209ENST00000548658 MAP7D1Q3KQU3 841 aa11.86□□□□□ -0.51
BEST3-209ENST00000548658 CYP2U1Q7Z449 544 aa11.86□□□□□ -0.51
BEST3-209ENST00000548658 TMEM110Q86TL2 294 aa11.86□□□□□ -0.51
BEST3-209ENST00000548658 IRF2BP1Q8IU81 584 aa11.86□□□□□ -0.51
BEST3-209ENST00000548658 CCDC117Q8IWD4 279 aaPredicted RBP11.86□□□□□ -0.51
BEST3-209ENST00000548658 WFIKKN2Q8TEU8 576 aa11.86□□□□□ -0.51
BEST3-209ENST00000548658 RLN3Q8WXF3 142 aa11.86□□□□□ -0.51
BEST3-209ENST00000548658 SHC3Q92529 594 aa11.86□□□□□ -0.51
BEST3-209ENST00000548658 FAM149B1Q96BN6 582 aa11.86□□□□□ -0.51
BEST3-209ENST00000548658 PIWIL1Q96J94 861 aaKnown RBP11.86□□□□□ -0.51
BEST3-209ENST00000548658 GBP4Q96PP9 640 aa11.86□□□□□ -0.51
BEST3-209ENST00000548658 ACOX2Q99424 681 aa11.86□□□□□ -0.51
BEST3-209ENST00000548658 ELOVL2Q9NXB9 296 aa11.86□□□□□ -0.51
BEST3-209ENST00000548658 THAP10Q9P2Z0 257 aaPredicted RBP11.86□□□□□ -0.51
BEST3-209ENST00000548658 HCN2Q9UL51 889 aa11.86□□□□□ -0.51
BEST3-209ENST00000548658 PLA2G4CQ9UP65 541 aa11.86□□□□□ -0.51
BEST3-209ENST00000548658 TLR6Q9Y2C9 796 aa11.86□□□□□ -0.51
BEST3-209ENST00000548658 STON1Q9Y6Q2 735 aa11.86□□□□□ -0.51
BEST3-209ENST00000548658 ABCA7Q8IZY2 2146 aa11.86□□□□□ -0.51
BEST3-209ENST00000548658 GOLGA6L22H0YM25 854 aa11.85□□□□□ -0.51
BEST3-209ENST00000548658 MSI1O43347 362 aaKnown RBP11.85□□□□□ -0.51
BEST3-209ENST00000548658 GDF9O60383 454 aa11.85□□□□□ -0.51
BEST3-209ENST00000548658 BCKDHBP21953 392 aa11.85□□□□□ -0.51
BEST3-209ENST00000548658 HOXD9P28356 352 aaPredicted RBP11.85□□□□□ -0.51
BEST3-209ENST00000548658 WASP42768 502 aa11.85□□□□□ -0.51
BEST3-209ENST00000548658 YWHAZP63104 245 aaKnown RBP11.85□□□□□ -0.51
BEST3-209ENST00000548658 ENPP2Q13822 863 aa11.85□□□□□ -0.51
BEST3-209ENST00000548658 CCDC6Q16204 474 aa11.85□□□□□ -0.51
BEST3-209ENST00000548658 ARHGAP44Q17R89 818 aa11.85□□□□□ -0.51
BEST3-209ENST00000548658 DPCR1Q3MIW9 517 aa11.85□□□□□ -0.51
BEST3-209ENST00000548658 VWA3BQ502W6 1294 aa11.85□□□□□ -0.51
BEST3-209ENST00000548658 RABEPKQ7Z6M1 372 aa11.85□□□□□ -0.51
BEST3-209ENST00000548658 METTL3Q86U44 580 aaKnown RBP11.85□□□□□ -0.51
BEST3-209ENST00000548658 SYT12Q8IV01 421 aa11.85□□□□□ -0.51
BEST3-209ENST00000548658 CLEC4CQ8WTT0 213 aa11.85□□□□□ -0.51
BEST3-209ENST00000548658 TUBGCP2Q9BSJ2 902 aa11.85□□□□□ -0.51
BEST3-209ENST00000548658 CIPCQ9C0C6 399 aa11.85□□□□□ -0.51
BEST3-209ENST00000548658 LHX5Q9H2C1 402 aa11.85□□□□□ -0.51
BEST3-209ENST00000548658 NDST4Q9H3R1 872 aa11.85□□□□□ -0.51
BEST3-209ENST00000548658 POPDC2Q9HBU9 364 aa11.85□□□□□ -0.51
BEST3-209ENST00000548658 CACNA2D2Q9NY47 1150 aa11.85□□□□□ -0.51
BEST3-209ENST00000548658 CALCOCO1Q9P1Z2 691 aa11.85□□□□□ -0.51
BEST3-209ENST00000548658 CEP83Q9Y592 693 aa11.85□□□□□ -0.51
BEST3-209ENST00000548658 THADAQ6YHU6 1953 aa11.85□□□□□ -0.51
BEST3-209ENST00000548658 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.84□□□□□ -0.51
BEST3-209ENST00000548658 DCDC2BA2VCK2 349 aa11.84□□□□□ -0.51
BEST3-209ENST00000548658 ACSL4O60488 711 aa11.84□□□□□ -0.51
BEST3-209ENST00000548658 ATP5BP06576 529 aaKnown RBP11.84□□□□□ -0.51
BEST3-209ENST00000548658 GLI1P08151 1106 aa11.84□□□□□ -0.51
BEST3-209ENST00000548658 SLC2A3P11169 496 aa11.84□□□□□ -0.51
BEST3-209ENST00000548658 NDUFV2P19404 249 aa11.84□□□□□ -0.51
BEST3-209ENST00000548658 EEF1GP26641 437 aaKnown RBP11.84□□□□□ -0.51
BEST3-209ENST00000548658 KRT9P35527 623 aa11.84□□□□□ -0.51
BEST3-209ENST00000548658 RPL6Q02878 288 aaKnown RBP11.84□□□□□ -0.51
BEST3-209ENST00000548658 LMAN2Q12907 356 aa11.84□□□□□ -0.51
BEST3-209ENST00000548658 MTA1Q13330 715 aa11.84□□□□□ -0.51
BEST3-209ENST00000548658 PDCLQ13371 301 aa11.84□□□□□ -0.51
BEST3-209ENST00000548658 EFHC1Q5JVL4 640 aa11.84□□□□□ -0.51
BEST3-209ENST00000548658 STPG1Q5TH74 334 aa11.84□□□□□ -0.51
BEST3-209ENST00000548658 PIK3R6Q5UE93 754 aa11.84□□□□□ -0.51
BEST3-209ENST00000548658 LYSMD4Q5XG99 296 aa11.84□□□□□ -0.51
BEST3-209ENST00000548658 RNF43Q68DV7 783 aa11.84□□□□□ -0.51
BEST3-209ENST00000548658 DENND1BQ6P3S1 775 aa11.84□□□□□ -0.51
BEST3-209ENST00000548658 SERPINA13PQ6UXR4 307 aa11.84□□□□□ -0.51
BEST3-209ENST00000548658 TMEFF1Q8IYR6 380 aa11.84□□□□□ -0.51
BEST3-209ENST00000548658 AHI1Q8N157 1196 aa11.84□□□□□ -0.51
BEST3-209ENST00000548658 CEP76Q8TAP6 659 aa11.84□□□□□ -0.51
BEST3-209ENST00000548658 DQX1Q8TE96 717 aaKnown RBP11.84□□□□□ -0.51
BEST3-209ENST00000548658 PIGKQ92643 395 aa11.84□□□□□ -0.51
BEST3-209ENST00000548658 MRGPRX1Q96LB2 322 aa11.84□□□□□ -0.51
BEST3-209ENST00000548658 CD248Q9HCU0 757 aa11.84□□□□□ -0.51
BEST3-209ENST00000548658 RTN4Q9NQC3 1192 aaKnown RBP11.84□□□□□ -0.51
BEST3-209ENST00000548658 TMEM51Q9NW97 253 aa11.84□□□□□ -0.51
BEST3-209ENST00000548658 SLC12A6Q9UHW9 1150 aa11.84□□□□□ -0.51
BEST3-209ENST00000548658 EVLQ9UI08 416 aaPredicted RBP11.84□□□□□ -0.51
BEST3-209ENST00000548658 DNAJC12Q9UKB3 198 aa11.84□□□□□ -0.51
BEST3-209ENST00000548658 PCDHGC3Q9UN70 934 aa11.84□□□□□ -0.51
BEST3-209ENST00000548658 NAALADL1Q9UQQ1 740 aa11.84□□□□□ -0.51
BEST3-209ENST00000548658 BECN2A8MW95 431 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms