RNA–Protein interactions for RNA: ENST00000548068.5

RAB5B-204, Transcript of RAB5B, member RAS oncogene family, human

TSL 4

Gene RAB5B, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5B-204	ENST00000548068	TRPM5	Q9NZQ8	1165 aa		12.82	□□□□□ -0.36
RAB5B-204	ENST00000548068	CWC15	Q9P013	229 aa	Known RBP	12.82	□□□□□ -0.36
RAB5B-204	ENST00000548068	ASIC3	Q9UHC3	531 aa		12.82	□□□□□ -0.36
RAB5B-204	ENST00000548068	SLC12A6	Q9UHW9	1150 aa		12.82	□□□□□ -0.36
RAB5B-204	ENST00000548068	DNPEP	Q9ULA0	475 aa		12.82	□□□□□ -0.36
RAB5B-204	ENST00000548068	MAGED2	Q9UNF1	606 aa	Predicted RBP	12.82	□□□□□ -0.36
RAB5B-204	ENST00000548068	INSL5	Q9Y5Q6	135 aa		12.82	□□□□□ -0.36
RAB5B-204	ENST00000548068	RAD54B	Q9Y620	910 aa		12.82	□□□□□ -0.36
RAB5B-204	ENST00000548068	ESYT3	A0FGR9	886 aa		12.81	□□□□□ -0.36
RAB5B-204	ENST00000548068	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	12.81	□□□□□ -0.36
RAB5B-204	ENST00000548068	CREB3	O43889	395 aa		12.81	□□□□□ -0.36
RAB5B-204	ENST00000548068	GOT1	P17174	413 aa		12.81	□□□□□ -0.36
RAB5B-204	ENST00000548068	TUB	P50607	506 aa		12.81	□□□□□ -0.36
RAB5B-204	ENST00000548068	TBX4	P57082	545 aa		12.81	□□□□□ -0.36
RAB5B-204	ENST00000548068	CAV1	Q03135	178 aa		12.81	□□□□□ -0.36
RAB5B-204	ENST00000548068	RING1	Q06587	406 aa		12.81	□□□□□ -0.36
RAB5B-204	ENST00000548068	SEMA3B	Q13214	749 aa		12.81	□□□□□ -0.36
RAB5B-204	ENST00000548068	XRCC4	Q13426	336 aa		12.81	□□□□□ -0.36
RAB5B-204	ENST00000548068	MTMR3	Q13615	1198 aa		12.81	□□□□□ -0.36
RAB5B-204	ENST00000548068	PDE12	Q6L8Q7	609 aa	Known RBP	12.81	□□□□□ -0.36
RAB5B-204	ENST00000548068	RFX8	Q6ZV50	586 aa		12.81	□□□□□ -0.36
RAB5B-204	ENST00000548068	RTL10	Q7L3V2	364 aa		12.81	□□□□□ -0.36
RAB5B-204	ENST00000548068	CDKL3	Q8IVW4	592 aa	Predicted RBP	12.81	□□□□□ -0.36
RAB5B-204	ENST00000548068	ELMOD1	Q8N336	334 aa		12.81	□□□□□ -0.36
RAB5B-204	ENST00000548068	ALLC	Q8N6M5	410 aa		12.81	□□□□□ -0.36
RAB5B-204	ENST00000548068	PQLC3	Q8N755	202 aa		12.81	□□□□□ -0.36
RAB5B-204	ENST00000548068	ATP6V0D2	Q8N8Y2	350 aa		12.81	□□□□□ -0.36
RAB5B-204	ENST00000548068	AEN	Q8WTP8	325 aa	Known RBP	12.81	□□□□□ -0.36
RAB5B-204	ENST00000548068	RSAD2	Q8WXG1	361 aa		12.81	□□□□□ -0.36
RAB5B-204	ENST00000548068	SNF8	Q96H20	258 aa		12.81	□□□□□ -0.36
RAB5B-204	ENST00000548068	ABHD8	Q96I13	439 aa		12.81	□□□□□ -0.36
RAB5B-204	ENST00000548068	ZNF512	Q96ME7	567 aa	Predicted RBP	12.81	□□□□□ -0.36
RAB5B-204	ENST00000548068	TCF25	Q9BQ70	676 aa		12.81	□□□□□ -0.36
RAB5B-204	ENST00000548068	DPH5	Q9H2P9	285 aa		12.81	□□□□□ -0.36
RAB5B-204	ENST00000548068	PLEKHA4	Q9H4M7	779 aa		12.81	□□□□□ -0.36
RAB5B-204	ENST00000548068	PCDH9	Q9HC56	1237 aa		12.81	□□□□□ -0.36
RAB5B-204	ENST00000548068	ARHGEF4	Q9NR80	690 aa		12.81	□□□□□ -0.36
RAB5B-204	ENST00000548068	TLR9	Q9NR96	1032 aa		12.81	□□□□□ -0.36
RAB5B-204	ENST00000548068	OSER1	Q9NX31	292 aa		12.81	□□□□□ -0.36
RAB5B-204	ENST00000548068	MARCH2	Q9P0N8	246 aa		12.81	□□□□□ -0.36
RAB5B-204	ENST00000548068	WHRN	Q9P202	907 aa		12.81	□□□□□ -0.36
RAB5B-204	ENST00000548068	MTRF1L	Q9UGC7	380 aa	Known RBP	12.81	□□□□□ -0.36
RAB5B-204	ENST00000548068	NFU1	Q9UMS0	254 aa		12.81	□□□□□ -0.36
RAB5B-204	ENST00000548068	HBS1L	Q9Y450	684 aa	Known RBP	12.81	□□□□□ -0.36
RAB5B-204	ENST00000548068	CLUH	O75153	1309 aa		12.81	□□□□□ -0.36
RAB5B-204	ENST00000548068	GBF1	Q92538	1859 aa		12.8	□□□□□ -0.36
RAB5B-204	ENST00000548068	LCHN	A4D1U4	455 aa		12.8	□□□□□ -0.36
RAB5B-204	ENST00000548068	HACD1	B0YJ81	288 aa		12.8	□□□□□ -0.36
RAB5B-204	ENST00000548068		H7C0C1	242 aa		12.8	□□□□□ -0.36
RAB5B-204	ENST00000548068	SGK1	O00141	431 aa		12.8	□□□□□ -0.36
RAB5B-204	ENST00000548068	FGF10	O15520	208 aa	Predicted RBP	12.8	□□□□□ -0.36
RAB5B-204	ENST00000548068	TLR5	O60602	858 aa		12.8	□□□□□ -0.36
RAB5B-204	ENST00000548068	KRT14	P02533	472 aa		12.8	□□□□□ -0.36
RAB5B-204	ENST00000548068	LRG1	P02750	347 aa		12.8	□□□□□ -0.36
RAB5B-204	ENST00000548068	CNP	P09543	421 aa	Known RBP	12.8	□□□□□ -0.36
RAB5B-204	ENST00000548068	RBP3	P10745	1247 aa		12.8	□□□□□ -0.36
RAB5B-204	ENST00000548068	PECAM1	P16284	738 aa	Predicted RBP	12.8	□□□□□ -0.36
RAB5B-204	ENST00000548068	KLRC2	P26717	231 aa		12.8	□□□□□ -0.36
RAB5B-204	ENST00000548068	STIP1	P31948	543 aa	Known RBP	12.8	□□□□□ -0.36
RAB5B-204	ENST00000548068	SERPINB6	P35237	376 aa		12.8	□□□□□ -0.36
RAB5B-204	ENST00000548068	TNNT3	P45378	269 aa	Predicted RBP	12.8	□□□□□ -0.36
RAB5B-204	ENST00000548068	ATP5O	P48047	213 aa		12.8	□□□□□ -0.36
RAB5B-204	ENST00000548068	CARS	P49589	748 aa	Known RBP	12.8	□□□□□ -0.36
RAB5B-204	ENST00000548068	NRG1	Q02297	640 aa	Predicted RBP	12.8	□□□□□ -0.36
RAB5B-204	ENST00000548068	TWF1	Q12792	350 aa		12.8	□□□□□ -0.36
RAB5B-204	ENST00000548068	EFEMP1	Q12805	493 aa		12.8	□□□□□ -0.36
RAB5B-204	ENST00000548068	DPYS	Q14117	519 aa		12.8	□□□□□ -0.36
RAB5B-204	ENST00000548068	PABPC1L	Q4VXU2	614 aa	Known RBP	12.8	□□□□□ -0.36
RAB5B-204	ENST00000548068	BEND6	Q5SZJ8	279 aa	Predicted RBP	12.8	□□□□□ -0.36
RAB5B-204	ENST00000548068	HECTD3	Q5T447	861 aa		12.8	□□□□□ -0.36
RAB5B-204	ENST00000548068	DARS2	Q6PI48	645 aa	Known RBP	12.8	□□□□□ -0.36
RAB5B-204	ENST00000548068	KLHDC10	Q6PID8	442 aa		12.8	□□□□□ -0.36
RAB5B-204	ENST00000548068	C1orf228	Q6PIY5	440 aa		12.8	□□□□□ -0.36
RAB5B-204	ENST00000548068	HDX	Q7Z353	690 aa		12.8	□□□□□ -0.36
RAB5B-204	ENST00000548068	PYROXD2	Q8N2H3	581 aa		12.8	□□□□□ -0.36
RAB5B-204	ENST00000548068	CAVIN3	Q969G5	261 aa		12.8	□□□□□ -0.36
RAB5B-204	ENST00000548068	PSMG2	Q969U7	264 aa		12.8	□□□□□ -0.36
RAB5B-204	ENST00000548068	LRRC45	Q96CN5	670 aa		12.8	□□□□□ -0.36
RAB5B-204	ENST00000548068	KLHL5	Q96PQ7	755 aa		12.8	□□□□□ -0.36
RAB5B-204	ENST00000548068	FAM118B	Q9BPY3	351 aa		12.8	□□□□□ -0.36
RAB5B-204	ENST00000548068	TRIM31	Q9BZY9	425 aa		12.8	□□□□□ -0.36
RAB5B-204	ENST00000548068	NACA2	Q9H009	215 aa		12.8	□□□□□ -0.36
RAB5B-204	ENST00000548068	TSPYL1	Q9H0U9	437 aa		12.8	□□□□□ -0.36
RAB5B-204	ENST00000548068	ACBD3	Q9H3P7	528 aa		12.8	□□□□□ -0.36
RAB5B-204	ENST00000548068	DONSON	Q9NYP3	566 aa		12.8	□□□□□ -0.36
RAB5B-204	ENST00000548068	PCDH10	Q9P2E7	1040 aa		12.8	□□□□□ -0.36
RAB5B-204	ENST00000548068	OR12D3	Q9UGF7	316 aa		12.8	□□□□□ -0.36
RAB5B-204	ENST00000548068	SFMBT1	Q9UHJ3	866 aa		12.8	□□□□□ -0.36
RAB5B-204	ENST00000548068	DNMT3L	Q9UJW3	386 aa		12.8	□□□□□ -0.36
RAB5B-204	ENST00000548068	PCDHA11	Q9Y5I1	949 aa		12.8	□□□□□ -0.36
RAB5B-204	ENST00000548068	HEY1	Q9Y5J3	304 aa		12.8	□□□□□ -0.36
RAB5B-204	ENST00000548068	NCAM2	O15394	837 aa		12.79	□□□□□ -0.36
RAB5B-204	ENST00000548068	MSI1	O43347	362 aa	Known RBP	12.79	□□□□□ -0.36
RAB5B-204	ENST00000548068	TGM5	O43548	720 aa		12.79	□□□□□ -0.36
RAB5B-204	ENST00000548068	GLUD1	P00367	558 aa		12.79	□□□□□ -0.36
RAB5B-204	ENST00000548068	MYBL2	P10244	700 aa		12.79	□□□□□ -0.36
RAB5B-204	ENST00000548068	HMGA1	P17096	107 aa	Known RBP	12.79	□□□□□ -0.36
RAB5B-204	ENST00000548068	ITIH2	P19823	946 aa		12.79	□□□□□ -0.36
RAB5B-204	ENST00000548068	AMPD1	P23109	780 aa		12.79	□□□□□ -0.36
RAB5B-204	ENST00000548068	ACTN2	P35609	894 aa		12.79	□□□□□ -0.36

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