RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 HACE1Q8IYU2 909 aa16.03■□□□□ 0.16
BRF1-212ENST00000547562 KCTD13Q8WZ19 329 aa16.03■□□□□ 0.16
BRF1-212ENST00000547562 MTBPQ96DY7 904 aa16.03■□□□□ 0.16
BRF1-212ENST00000547562 TMEM237Q96Q45 408 aa16.03■□□□□ 0.16
BRF1-212ENST00000547562 NPY6RQ99463 290 aa16.03■□□□□ 0.16
BRF1-212ENST00000547562 CYB561D2O14569 222 aa16.03■□□□□ 0.16
BRF1-212ENST00000547562 IL1BP01584 269 aa16.03■□□□□ 0.16
BRF1-212ENST00000547562 CDK16Q00536 496 aa16.03■□□□□ 0.16
BRF1-212ENST00000547562 BMPR2Q13873 1038 aa16.03■□□□□ 0.16
BRF1-212ENST00000547562 NBPF20Q3BBV1 942 aa16.03■□□□□ 0.16
BRF1-212ENST00000547562 MTDHQ86UE4 582 aaKnown RBP16.03■□□□□ 0.16
BRF1-212ENST00000547562 NME8Q8N427 588 aa16.03■□□□□ 0.16
BRF1-212ENST00000547562 AGAP11Q8TF27 550 aa16.03■□□□□ 0.16
BRF1-212ENST00000547562 RNF139Q8WU17 664 aa16.03■□□□□ 0.16
BRF1-212ENST00000547562 UTP4Q969X6 686 aaKnown RBP16.03■□□□□ 0.16
BRF1-212ENST00000547562 MKS1Q9NXB0 559 aa16.03■□□□□ 0.16
BRF1-212ENST00000547562 PLLPQ9Y342 182 aa16.03■□□□□ 0.16
BRF1-212ENST00000547562 A0A0G2JND7 137 aa16.02■□□□□ 0.16
BRF1-212ENST00000547562 H3BRJ5 948 aa16.02■□□□□ 0.16
BRF1-212ENST00000547562 KLF11O14901 512 aa16.02■□□□□ 0.16
BRF1-212ENST00000547562 MLNP12872 115 aa16.02■□□□□ 0.16
BRF1-212ENST00000547562 EZRP15311 586 aaKnown RBP16.02■□□□□ 0.16
BRF1-212ENST00000547562 NDUFV1P49821 464 aa16.02■□□□□ 0.16
BRF1-212ENST00000547562 WSCD1Q658N2 575 aa16.02■□□□□ 0.16
BRF1-212ENST00000547562 ZNF449Q6P9G9 518 aa16.02■□□□□ 0.16
BRF1-212ENST00000547562 CLEC20AQ6ZU45 233 aa16.02■□□□□ 0.16
BRF1-212ENST00000547562 CLNKQ7Z7G1 428 aa16.02■□□□□ 0.16
BRF1-212ENST00000547562 C2orf69Q8N8R5 385 aa16.02■□□□□ 0.16
BRF1-212ENST00000547562 SLC7A6OSQ96CW6 309 aaPredicted RBP16.02■□□□□ 0.16
BRF1-212ENST00000547562 ZFP42Q96MM3 310 aa16.02■□□□□ 0.16
BRF1-212ENST00000547562 PPP1R10Q96QC0 940 aaKnown RBP16.02■□□□□ 0.16
BRF1-212ENST00000547562 KATNAL1Q9BW62 490 aa16.02■□□□□ 0.16
BRF1-212ENST00000547562 LRRC4Q9HBW1 653 aa16.02■□□□□ 0.16
BRF1-212ENST00000547562 TMPRSS4Q9NRS4 437 aa16.02■□□□□ 0.16
BRF1-212ENST00000547562 STAP1Q9ULZ2 295 aa16.02■□□□□ 0.16
BRF1-212ENST00000547562 NUMBLQ9Y6R0 609 aa16.02■□□□□ 0.16
BRF1-212ENST00000547562 SYNJ2BP-COX16A0A087WUM0 186 aa16.02■□□□□ 0.15
BRF1-212ENST00000547562 M0QYT0 321 aa16.02■□□□□ 0.15
BRF1-212ENST00000547562 GABRDO14764 452 aa16.02■□□□□ 0.15
BRF1-212ENST00000547562 CBX6O95503 412 aa16.02■□□□□ 0.15
BRF1-212ENST00000547562 CCL14Q16627 93 aa16.02■□□□□ 0.15
BRF1-212ENST00000547562 CYS1Q717R9 158 aa16.02■□□□□ 0.15
BRF1-212ENST00000547562 SIX6OS1Q8N1H7 587 aa16.02■□□□□ 0.15
BRF1-212ENST00000547562 COLGALT1Q8NBJ5 622 aa16.02■□□□□ 0.15
BRF1-212ENST00000547562 STAMBPL1Q96FJ0 436 aa16.02■□□□□ 0.15
BRF1-212ENST00000547562 OXNAD1Q96HP4 312 aaPredicted RBP16.02■□□□□ 0.15
BRF1-212ENST00000547562 SLC2A13Q96QE2 648 aa16.02■□□□□ 0.15
BRF1-212ENST00000547562 AP5M1Q9H0R1 490 aa16.02■□□□□ 0.15
BRF1-212ENST00000547562 SAR1AQ9NR31 198 aa16.02■□□□□ 0.15
BRF1-212ENST00000547562 MOCS1Q9NZB8 636 aa16.02■□□□□ 0.15
BRF1-212ENST00000547562 COX16Q9P0S2 106 aa16.02■□□□□ 0.15
BRF1-212ENST00000547562 SF3B1O75533 1304 aaKnown RBP eCLIP16.01■□□□□ 0.156e-8■■■■■ 80.2
BRF1-212ENST00000547562 HMX2A2RU54 273 aa16.01■□□□□ 0.15
BRF1-212ENST00000547562 OPHN1O60890 802 aa16.01■□□□□ 0.15
BRF1-212ENST00000547562 STK10O94804 968 aaKnown RBP16.01■□□□□ 0.15
BRF1-212ENST00000547562 FAM163BP0C2L3 166 aa16.01■□□□□ 0.15
BRF1-212ENST00000547562 HOXC8P31273 242 aa16.01■□□□□ 0.15
BRF1-212ENST00000547562 SERPINB9P50453 376 aa16.01■□□□□ 0.15
BRF1-212ENST00000547562 RASSF2P50749 326 aa16.01■□□□□ 0.15
BRF1-212ENST00000547562 AP1B1Q10567 949 aa16.01■□□□□ 0.15
BRF1-212ENST00000547562 CTC1Q2NKJ3 1217 aa16.01■□□□□ 0.15
BRF1-212ENST00000547562 MDH1BQ5I0G3 518 aa16.01■□□□□ 0.15
BRF1-212ENST00000547562 SYPL2Q5VXT5 272 aa16.01■□□□□ 0.15
BRF1-212ENST00000547562 STEAP4Q687X5 459 aa16.01■□□□□ 0.15
BRF1-212ENST00000547562 P2RY11Q96G91 374 aa16.01■□□□□ 0.15
BRF1-212ENST00000547562 KCNK13Q9HB14 408 aa16.01■□□□□ 0.15
BRF1-212ENST00000547562 EIF2B3Q9NR50 452 aaKnown RBP16.01■□□□□ 0.15
BRF1-212ENST00000547562 F5H423 210 aaPredicted RBP16■□□□□ 0.15
BRF1-212ENST00000547562 RNF103O00237 685 aa16■□□□□ 0.15
BRF1-212ENST00000547562 DLDP09622 509 aaKnown RBP16■□□□□ 0.15
BRF1-212ENST00000547562 GNAT1P11488 350 aa16■□□□□ 0.15
BRF1-212ENST00000547562 GLUD2P49448 558 aa16■□□□□ 0.15
BRF1-212ENST00000547562 ARFIP2P53365 341 aa16■□□□□ 0.15
BRF1-212ENST00000547562 KIAA0319Q5VV43 1072 aa16■□□□□ 0.15
BRF1-212ENST00000547562 DEPDC1BQ8WUY9 529 aa16■□□□□ 0.15
BRF1-212ENST00000547562 WNT8BQ93098 351 aa16■□□□□ 0.15
BRF1-212ENST00000547562 FERMT1Q9BQL6 677 aa16■□□□□ 0.15
BRF1-212ENST00000547562 MED10Q9BTT4 135 aa16■□□□□ 0.15
BRF1-212ENST00000547562 SLC13A1Q9BZW2 595 aa16■□□□□ 0.15
BRF1-212ENST00000547562 EPB41L3Q9Y2J2 1087 aaPredicted RBP16■□□□□ 0.15
BRF1-212ENST00000547562 Q9Y3F1 56 aa16■□□□□ 0.15
BRF1-212ENST00000547562 TRPM7Q96QT4 1865 aa16■□□□□ 0.15
BRF1-212ENST00000547562 WDR27A2RRH5 827 aa16■□□□□ 0.15
BRF1-212ENST00000547562 TRAFD1O14545 582 aaPredicted RBP16■□□□□ 0.15
BRF1-212ENST00000547562 CREB3O43889 395 aa16■□□□□ 0.15
BRF1-212ENST00000547562 ALDH1A2O94788 518 aa16■□□□□ 0.15
BRF1-212ENST00000547562 CELF2O95319 508 aaKnown RBP16■□□□□ 0.15
BRF1-212ENST00000547562 CCND1P24385 295 aa16■□□□□ 0.15
BRF1-212ENST00000547562 IGFBP6P24592 240 aaPredicted RBP16■□□□□ 0.15
BRF1-212ENST00000547562 TKTL1P51854 596 aa16■□□□□ 0.15
BRF1-212ENST00000547562 MAP3K7CLP57077 242 aa16■□□□□ 0.15
BRF1-212ENST00000547562 DEUP1Q05D60 604 aa16■□□□□ 0.15
BRF1-212ENST00000547562 NME3Q13232 169 aa16■□□□□ 0.15
BRF1-212ENST00000547562 PDK1Q15118 436 aa16■□□□□ 0.15
BRF1-212ENST00000547562 MROH9Q5TGP6 573 aa16■□□□□ 0.15
BRF1-212ENST00000547562 LRRC8BQ6P9F7 803 aa16■□□□□ 0.15
BRF1-212ENST00000547562 HFE2Q6ZVN8 426 aa16■□□□□ 0.15
BRF1-212ENST00000547562 PDCD7Q8N8D1 485 aaKnown RBP16■□□□□ 0.15
BRF1-212ENST00000547562 NETO2Q8NC67 525 aa16■□□□□ 0.15
BRF1-212ENST00000547562 KRT82Q9NSB4 513 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms