RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 AZIN2Q96A70 460 aa17.48■□□□□ 0.39
LTBR-215ENST00000546296 TRIM11Q96F44 468 aa17.48■□□□□ 0.39
LTBR-215ENST00000546296 XPO6Q96QU8 1125 aaKnown RBP17.48■□□□□ 0.39
LTBR-215ENST00000546296 TBCBQ99426 244 aa17.48■□□□□ 0.39
LTBR-215ENST00000546296 NPY6RQ99463 290 aa17.48■□□□□ 0.39
LTBR-215ENST00000546296 DEF6Q9H4E7 631 aa17.48■□□□□ 0.39
LTBR-215ENST00000546296 ARHGAP20Q9P2F6 1191 aa17.48■□□□□ 0.39
LTBR-215ENST00000546296 GOLGA6L7A0A1B0GV03 622 aa17.47■□□□□ 0.39
LTBR-215ENST00000546296 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.47■□□□□ 0.39
LTBR-215ENST00000546296 DRD1P21728 446 aa17.47■□□□□ 0.39
LTBR-215ENST00000546296 SDC4P31431 198 aa17.47■□□□□ 0.39
LTBR-215ENST00000546296 GSCP56915 257 aaPredicted RBP17.47■□□□□ 0.39
LTBR-215ENST00000546296 GAB4Q2WGN9 574 aa17.47■□□□□ 0.39
LTBR-215ENST00000546296 DGKKQ5KSL6 1271 aa17.47■□□□□ 0.39
LTBR-215ENST00000546296 NAIF1Q69YI7 327 aaPredicted RBP17.47■□□□□ 0.39
LTBR-215ENST00000546296 WDR59Q6PJI9 974 aa17.47■□□□□ 0.39
LTBR-215ENST00000546296 CCDC105Q8IYK2 499 aa17.47■□□□□ 0.39
LTBR-215ENST00000546296 CPXM2Q8N436 756 aa17.47■□□□□ 0.39
LTBR-215ENST00000546296 TMEM105Q8N8V8 129 aa17.47■□□□□ 0.39
LTBR-215ENST00000546296 JOSD2Q8TAC2 188 aa17.47■□□□□ 0.39
LTBR-215ENST00000546296 TMA16Q96EY4 203 aaKnown RBP17.47■□□□□ 0.39
LTBR-215ENST00000546296 BTN2A3PQ96KV6 586 aa17.47■□□□□ 0.39
LTBR-215ENST00000546296 CFAP57Q96MR6 1250 aa17.47■□□□□ 0.39
LTBR-215ENST00000546296 PNKPQ96T60 521 aa17.47■□□□□ 0.39
LTBR-215ENST00000546296 FBRSL1Q9HCM7 1045 aaKnown RBP17.47■□□□□ 0.39
LTBR-215ENST00000546296 PARVAQ9NVD7 372 aa17.47■□□□□ 0.39
LTBR-215ENST00000546296 TMEM51Q9NW97 253 aa17.47■□□□□ 0.39
LTBR-215ENST00000546296 PLK2Q9NYY3 685 aa17.47■□□□□ 0.39
LTBR-215ENST00000546296 MARK1Q9P0L2 795 aa17.47■□□□□ 0.39
LTBR-215ENST00000546296 DEC1Q9P2X7 70 aa17.47■□□□□ 0.39
LTBR-215ENST00000546296 PAXBP1Q9Y5B6 917 aa17.47■□□□□ 0.39
LTBR-215ENST00000546296 COL4A3Q01955 1670 aa17.46■□□□□ 0.39
LTBR-215ENST00000546296 A0A087X0T9 212 aa17.46■□□□□ 0.39
LTBR-215ENST00000546296 FAM228BP0C875 321 aa17.46■□□□□ 0.39
LTBR-215ENST00000546296 TFE3P19532 575 aaPredicted RBP17.46■□□□□ 0.39
LTBR-215ENST00000546296 RFC1P35251 1148 aaPredicted RBP17.46■□□□□ 0.39
LTBR-215ENST00000546296 OPRD1P41143 372 aa17.46■□□□□ 0.39
LTBR-215ENST00000546296 ATP11AP98196 1134 aa17.46■□□□□ 0.39
LTBR-215ENST00000546296 PPP2R5DQ14738 602 aa17.46■□□□□ 0.39
LTBR-215ENST00000546296 ARID5BQ14865 1188 aa17.46■□□□□ 0.39
LTBR-215ENST00000546296 PREPLQ4J6C6 727 aaPredicted RBP17.46■□□□□ 0.39
LTBR-215ENST00000546296 MPPE1Q53F39 396 aa17.46■□□□□ 0.39
LTBR-215ENST00000546296 TMEM196Q5HYL7 178 aa17.46■□□□□ 0.39
LTBR-215ENST00000546296 CCDC122Q5T0U0 273 aa17.46■□□□□ 0.39
LTBR-215ENST00000546296 FSTL4Q6MZW2 842 aa17.46■□□□□ 0.39
LTBR-215ENST00000546296 TRNP1Q6NT89 227 aa17.46■□□□□ 0.39
LTBR-215ENST00000546296 FAM217AQ8IXS0 508 aa17.46■□□□□ 0.39
LTBR-215ENST00000546296 NT5C3BQ969T7 300 aa17.46■□□□□ 0.39
LTBR-215ENST00000546296 ZNF653Q96CK0 615 aa17.46■□□□□ 0.39
LTBR-215ENST00000546296 ISCUQ9H1K1 167 aa17.46■□□□□ 0.39
LTBR-215ENST00000546296 WDCPQ9H6R7 721 aa17.46■□□□□ 0.39
LTBR-215ENST00000546296 ARHGEF4Q9NR80 690 aa17.46■□□□□ 0.39
LTBR-215ENST00000546296 PIGVQ9NUD9 493 aa17.46■□□□□ 0.39
LTBR-215ENST00000546296 DNAJC17Q9NVM6 304 aaKnown RBP17.46■□□□□ 0.39
LTBR-215ENST00000546296 MYO1AQ9UBC5 1043 aa17.46■□□□□ 0.39
LTBR-215ENST00000546296 CNOT8Q9UFF9 292 aaKnown RBP17.46■□□□□ 0.39
LTBR-215ENST00000546296 STOML2Q9UJZ1 356 aa17.46■□□□□ 0.39
LTBR-215ENST00000546296 C2CD4BA6NLJ0 364 aa17.45■□□□□ 0.38
LTBR-215ENST00000546296 KCNU1A8MYU2 1149 aa17.45■□□□□ 0.38
LTBR-215ENST00000546296 AKR1B10O60218 316 aa17.45■□□□□ 0.38
LTBR-215ENST00000546296 TULP3O75386 442 aa17.45■□□□□ 0.38
LTBR-215ENST00000546296 ADCY5O95622 1261 aa17.45■□□□□ 0.38
LTBR-215ENST00000546296 EGFP01133 1207 aa17.45■□□□□ 0.38
LTBR-215ENST00000546296 APODP05090 189 aa17.45■□□□□ 0.38
LTBR-215ENST00000546296 MYBL1P10243 752 aa17.45■□□□□ 0.38
LTBR-215ENST00000546296 CHRNB1P11230 501 aa17.45■□□□□ 0.38
LTBR-215ENST00000546296 DESP17661 470 aa17.45■□□□□ 0.38
LTBR-215ENST00000546296 GPD1P21695 349 aa17.45■□□□□ 0.38
LTBR-215ENST00000546296 RDXP35241 583 aaKnown RBP17.45■□□□□ 0.38
LTBR-215ENST00000546296 EIF2DP41214 584 aaKnown RBP17.45■□□□□ 0.38
LTBR-215ENST00000546296 CXCR3P49682 368 aa17.45■□□□□ 0.38
LTBR-215ENST00000546296 KDSRQ06136 332 aa17.45■□□□□ 0.38
LTBR-215ENST00000546296 MTA1Q13330 715 aa17.45■□□□□ 0.38
LTBR-215ENST00000546296 EIF4EBP2Q13542 120 aaPredicted RBP17.45■□□□□ 0.38
LTBR-215ENST00000546296 CDO1Q16878 200 aa17.45■□□□□ 0.38
LTBR-215ENST00000546296 CCDC14Q49A88 953 aa17.45■□□□□ 0.38
LTBR-215ENST00000546296 BRMS1LQ5PSV4 323 aa17.45■□□□□ 0.38
LTBR-215ENST00000546296 ALKBH5Q6P6C2 394 aaKnown RBP17.45■□□□□ 0.38
LTBR-215ENST00000546296 RFWD3Q6PCD5 774 aa17.45■□□□□ 0.38
LTBR-215ENST00000546296 NUDT18Q6ZVK8 323 aa17.45■□□□□ 0.38
LTBR-215ENST00000546296 C12orf40Q86WS4 652 aa17.45■□□□□ 0.38
LTBR-215ENST00000546296 CHSY1Q86X52 802 aa17.45■□□□□ 0.38
LTBR-215ENST00000546296 ZNF687Q8N1G0 1237 aa17.45■□□□□ 0.38
LTBR-215ENST00000546296 CLDN23Q96B33 292 aa17.45■□□□□ 0.38
LTBR-215ENST00000546296 PGAP3Q96FM1 320 aaPredicted RBP17.45■□□□□ 0.38
LTBR-215ENST00000546296 CCDC42Q96M95 316 aa17.45■□□□□ 0.38
LTBR-215ENST00000546296 MCEEQ96PE7 176 aa17.45■□□□□ 0.38
LTBR-215ENST00000546296 RBM12Q9NTZ6 932 aaKnown RBP17.45■□□□□ 0.38
LTBR-215ENST00000546296 CALCOCO1Q9P1Z2 691 aa17.45■□□□□ 0.38
LTBR-215ENST00000546296 KIF26AQ9ULI4 1882 aaPredicted RBP17.45■□□□□ 0.38
LTBR-215ENST00000546296 COL4A2P08572 1712 aa17.44■□□□□ 0.38
LTBR-215ENST00000546296 SSU72P8A0A1W2PR75 194 aa17.44■□□□□ 0.38
LTBR-215ENST00000546296 TCRBV5S1A1TA0A578 114 aa17.44■□□□□ 0.38
LTBR-215ENST00000546296 TYW5A2RUC4 315 aaKnown RBP17.44■□□□□ 0.38
LTBR-215ENST00000546296 TBC1D3BA6NDS4 549 aa17.44■□□□□ 0.38
LTBR-215ENST00000546296 ATMINO43313 823 aaPredicted RBP17.44■□□□□ 0.38
LTBR-215ENST00000546296 CACNG3O60359 315 aa17.44■□□□□ 0.38
LTBR-215ENST00000546296 PENKP01210 267 aaPredicted RBP17.44■□□□□ 0.38
LTBR-215ENST00000546296 GRIA2P42262 883 aa17.44■□□□□ 0.38
LTBR-215ENST00000546296 MAGEA9P43362 315 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms