RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 CD58P19256 250 aa17.46■□□□□ 0.39
CPSF7-225ENST00000545934 GCLMP48507 274 aa17.46■□□□□ 0.39
CPSF7-225ENST00000545934 BHLHA9Q7RTU4 235 aa17.46■□□□□ 0.39
CPSF7-225ENST00000545934 CEP57L1Q8IYX8 460 aa17.46■□□□□ 0.39
CPSF7-225ENST00000545934 OR2T3Q8NH03 318 aa17.46■□□□□ 0.39
CPSF7-225ENST00000545934 CDC6Q99741 560 aa17.46■□□□□ 0.39
CPSF7-225ENST00000545934 IMPG2Q9BZV3 1241 aa17.46■□□□□ 0.39
CPSF7-225ENST00000545934 TMEM245Q9H330 911 aa17.46■□□□□ 0.39
CPSF7-225ENST00000545934 MARCH2Q9P0N8 246 aa17.46■□□□□ 0.39
CPSF7-225ENST00000545934 BTBD3Q9Y2F9 522 aa17.46■□□□□ 0.39
CPSF7-225ENST00000545934 A0A1B0GVT2 93 aa17.45■□□□□ 0.38
CPSF7-225ENST00000545934 CALUO43852 315 aaPredicted RBP17.45■□□□□ 0.38
CPSF7-225ENST00000545934 EPHX1P07099 455 aa17.45■□□□□ 0.38
CPSF7-225ENST00000545934 TRIM49P0CI25 452 aa17.45■□□□□ 0.38
CPSF7-225ENST00000545934 TRIM49CP0CI26 452 aa17.45■□□□□ 0.38
CPSF7-225ENST00000545934 ACADMP11310 421 aa17.45■□□□□ 0.38
CPSF7-225ENST00000545934 HOXD9P28356 352 aaPredicted RBP17.45■□□□□ 0.38
CPSF7-225ENST00000545934 ME1P48163 572 aa17.45■□□□□ 0.38
CPSF7-225ENST00000545934 AFF3P51826 1226 aaKnown RBP17.45■□□□□ 0.38
CPSF7-225ENST00000545934 PDE4CQ08493 712 aa17.45■□□□□ 0.38
CPSF7-225ENST00000545934 CAMK2BQ13554 666 aa17.45■□□□□ 0.38
CPSF7-225ENST00000545934 TRIP4Q15650 581 aaPredicted RBP17.45■□□□□ 0.38
CPSF7-225ENST00000545934 PM20D1Q6GTS8 502 aa17.45■□□□□ 0.38
CPSF7-225ENST00000545934 SERPINA13PQ6UXR4 307 aa17.45■□□□□ 0.38
CPSF7-225ENST00000545934 INTS8Q75QN2 995 aaKnown RBP17.45■□□□□ 0.38
CPSF7-225ENST00000545934 KIAA0907Q7Z7F0 614 aaPredicted RBP17.45■□□□□ 0.38
CPSF7-225ENST00000545934 PIGZQ86VD9 579 aa17.45■□□□□ 0.38
CPSF7-225ENST00000545934 ARHGAP18Q8N392 663 aa17.45■□□□□ 0.38
CPSF7-225ENST00000545934 PLD4Q96BZ4 506 aa17.45■□□□□ 0.38
CPSF7-225ENST00000545934 FAXDC2Q96IV6 333 aa17.45■□□□□ 0.38
CPSF7-225ENST00000545934 CIPCQ9C0C6 399 aa17.45■□□□□ 0.38
CPSF7-225ENST00000545934 C6orf106Q9H6K1 298 aaPredicted RBP17.45■□□□□ 0.38
CPSF7-225ENST00000545934 STOML2Q9UJZ1 356 aa17.45■□□□□ 0.38
CPSF7-225ENST00000545934 RAXQ9Y2V3 346 aa17.45■□□□□ 0.38
CPSF7-225ENST00000545934 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.45■□□□□ 0.38
CPSF7-225ENST00000545934 KNL1Q8NG31 2342 aa17.45■□□□□ 0.38
CPSF7-225ENST00000545934 KIF20AO95235 890 aa17.44■□□□□ 0.38
CPSF7-225ENST00000545934 MYL1P05976 194 aa17.44■□□□□ 0.38
CPSF7-225ENST00000545934 HLA-EP13747 358 aa17.44■□□□□ 0.38
CPSF7-225ENST00000545934 HLA-FP30511 346 aa17.44■□□□□ 0.38
CPSF7-225ENST00000545934 ACSL1P33121 698 aa17.44■□□□□ 0.38
CPSF7-225ENST00000545934 CSNK1EP49674 416 aaKnown RBP17.44■□□□□ 0.38
CPSF7-225ENST00000545934 YWHAGP61981 247 aaKnown RBP eCLIP17.44■□□□□ 0.38
CPSF7-225ENST00000545934 KIF19Q2TAC6 998 aa17.44■□□□□ 0.38
CPSF7-225ENST00000545934 ARHGAP17Q68EM7 881 aa17.44■□□□□ 0.38
CPSF7-225ENST00000545934 ATL3Q6DD88 541 aa17.44■□□□□ 0.38
CPSF7-225ENST00000545934 CACUL1Q86Y37 369 aa17.44■□□□□ 0.38
CPSF7-225ENST00000545934 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.44■□□□□ 0.384e-6■■■■■ 36.6
CPSF7-225ENST00000545934 SLC4A11Q8NBS3 891 aa17.44■□□□□ 0.38
CPSF7-225ENST00000545934 SPRYD3Q8NCJ5 442 aa17.44■□□□□ 0.38
CPSF7-225ENST00000545934 RHBDD1Q8TEB9 315 aa17.44■□□□□ 0.38
CPSF7-225ENST00000545934 DDI1Q8WTU0 396 aa17.44■□□□□ 0.38
CPSF7-225ENST00000545934 SNX11Q9Y5W9 270 aa17.44■□□□□ 0.38
CPSF7-225ENST00000545934 GOLGA4Q13439 2230 aaKnown RBP17.43■□□□□ 0.38
CPSF7-225ENST00000545934 SLC12A8A0AV02 714 aa17.43■□□□□ 0.38
CPSF7-225ENST00000545934 F13A1P00488 732 aa17.43■□□□□ 0.38
CPSF7-225ENST00000545934 ZSCAN22P10073 491 aaPredicted RBP17.43■□□□□ 0.38
CPSF7-225ENST00000545934 NR2F2P24468 414 aa17.43■□□□□ 0.38
CPSF7-225ENST00000545934 GRIA4P48058 902 aa17.43■□□□□ 0.38
CPSF7-225ENST00000545934 RAD23BP54727 409 aa17.43■□□□□ 0.38
CPSF7-225ENST00000545934 PTPRNQ16849 979 aa17.43■□□□□ 0.38
CPSF7-225ENST00000545934 MPPE1Q53F39 396 aa17.43■□□□□ 0.38
CPSF7-225ENST00000545934 ZNF394Q53GI3 561 aa17.43■□□□□ 0.38
CPSF7-225ENST00000545934 ADIPOR2Q86V24 386 aa17.43■□□□□ 0.38
CPSF7-225ENST00000545934 FAM124AQ86V42 546 aa17.43■□□□□ 0.38
CPSF7-225ENST00000545934 TTC39CQ8N584 583 aa17.43■□□□□ 0.38
CPSF7-225ENST00000545934 TMEM176AQ96HP8 235 aa17.43■□□□□ 0.38
CPSF7-225ENST00000545934 BBC3Q96PG8 261 aaPredicted RBP17.43■□□□□ 0.38
CPSF7-225ENST00000545934 ORAI3Q9BRQ5 295 aa17.43■□□□□ 0.38
CPSF7-225ENST00000545934 DNAI2Q9GZS0 605 aa17.43■□□□□ 0.38
CPSF7-225ENST00000545934 LHX5Q9H2C1 402 aa17.43■□□□□ 0.38
CPSF7-225ENST00000545934 TMEM8AQ9HCN3 771 aa17.43■□□□□ 0.38
CPSF7-225ENST00000545934 TM9SF3Q9HD45 589 aa17.43■□□□□ 0.38
CPSF7-225ENST00000545934 RCOR1Q9UKL0 485 aa17.43■□□□□ 0.38
CPSF7-225ENST00000545934 STRIP2Q9ULQ0 834 aa17.43■□□□□ 0.38
CPSF7-225ENST00000545934 URB1O60287 2271 aaKnown RBP17.42■□□□□ 0.38
CPSF7-225ENST00000545934 PAPSS1O43252 624 aaPredicted RBP17.42■□□□□ 0.38
CPSF7-225ENST00000545934 PCDHGA12O60330 932 aa17.42■□□□□ 0.38
CPSF7-225ENST00000545934 TSPAN3O60637 253 aa17.42■□□□□ 0.38
CPSF7-225ENST00000545934 RPS14P62263 151 aaKnown RBP17.42■□□□□ 0.38
CPSF7-225ENST00000545934 ZBTB16Q05516 673 aa17.42■□□□□ 0.38
CPSF7-225ENST00000545934 SUZ12Q15022 739 aaKnown RBP17.42■□□□□ 0.38
CPSF7-225ENST00000545934 SMAD1Q15797 465 aaKnown RBP17.42■□□□□ 0.38
CPSF7-225ENST00000545934 FOXD4L5Q5VV16 416 aaPredicted RBP17.42■□□□□ 0.38
CPSF7-225ENST00000545934 RSRC2Q7L4I2 434 aaKnown RBP17.42■□□□□ 0.38
CPSF7-225ENST00000545934 ZC3H3Q8IXZ2 948 aaKnown RBP17.42■□□□□ 0.38
CPSF7-225ENST00000545934 GALNT15Q8N3T1 639 aa17.42■□□□□ 0.38
CPSF7-225ENST00000545934 ANKRD52Q8NB46 1076 aa17.42■□□□□ 0.38
CPSF7-225ENST00000545934 WFIKKN2Q8TEU8 576 aa17.42■□□□□ 0.38
CPSF7-225ENST00000545934 HNRNPLLQ8WVV9 542 aaKnown RBP17.42■□□□□ 0.38
CPSF7-225ENST00000545934 FOXD4L4Q8WXT5 416 aaPredicted RBP17.42■□□□□ 0.38
CPSF7-225ENST00000545934 SEMA4DQ92854 862 aa17.42■□□□□ 0.38
CPSF7-225ENST00000545934 BIRC7Q96CA5 298 aa17.42■□□□□ 0.38
CPSF7-225ENST00000545934 HEXIM2Q96MH2 286 aaKnown RBP17.42■□□□□ 0.38
CPSF7-225ENST00000545934 ARID3AQ99856 593 aa17.42■□□□□ 0.38
CPSF7-225ENST00000545934 CISHQ9NSE2 258 aa17.42■□□□□ 0.38
CPSF7-225ENST00000545934 HPSEQ9Y251 543 aa17.42■□□□□ 0.38
CPSF7-225ENST00000545934 ANKRD6Q9Y2G4 727 aa17.42■□□□□ 0.38
CPSF7-225ENST00000545934 TRABD2BA6NFA1 517 aa17.41■□□□□ 0.38
CPSF7-225ENST00000545934 TNFSF14O43557 240 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms