RNA–Protein interactions for RNA: ENST00000545115.5

DDX11-228, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-228ENST00000545115 MPPE1Q53F39 396 aa14.76□□□□□ -0.05
DDX11-228ENST00000545115 ZNF658Q5TYW1 1059 aaPredicted RBP14.76□□□□□ -0.05
DDX11-228ENST00000545115 SERPINA13PQ6UXR4 307 aa14.76□□□□□ -0.05
DDX11-228ENST00000545115 FMNL3Q8IVF7 1028 aa14.76□□□□□ -0.05
DDX11-228ENST00000545115 RBBP8NLQ8NC74 664 aaPredicted RBP14.76□□□□□ -0.05
DDX11-228ENST00000545115 CADM4Q8NFZ8 388 aa14.76□□□□□ -0.05
DDX11-228ENST00000545115 RNF139Q8WU17 664 aa14.76□□□□□ -0.05
DDX11-228ENST00000545115 PRCCQ92733 491 aaPredicted RBP14.76□□□□□ -0.05
DDX11-228ENST00000545115 GSDMAQ96QA5 445 aa14.76□□□□□ -0.05
DDX11-228ENST00000545115 GPR174Q9BXC1 333 aa14.76□□□□□ -0.05
DDX11-228ENST00000545115 HBS1LQ9Y450 684 aaKnown RBP14.76□□□□□ -0.05
DDX11-228ENST00000545115 CACNA1EQ15878 2313 aa14.76□□□□□ -0.05
DDX11-228ENST00000545115 PCNX2A6NKB5 2137 aa14.75□□□□□ -0.05
DDX11-228ENST00000545115 A0A1B0GTW7 788 aa14.75□□□□□ -0.05
DDX11-228ENST00000545115 KCNJ18B7U540 433 aa14.75□□□□□ -0.05
DDX11-228ENST00000545115 TIMM44O43615 452 aa14.75□□□□□ -0.05
DDX11-228ENST00000545115 GJB3O75712 270 aa14.75□□□□□ -0.05
DDX11-228ENST00000545115 EPHX1P07099 455 aa14.75□□□□□ -0.05
DDX11-228ENST00000545115 SETSIPP0DME0 302 aa14.75□□□□□ -0.05
DDX11-228ENST00000545115 ACADMP11310 421 aa14.75□□□□□ -0.05
DDX11-228ENST00000545115 VDRP11473 427 aa14.75□□□□□ -0.05
DDX11-228ENST00000545115 TBXAS1P24557 533 aaPredicted RBP14.75□□□□□ -0.05
DDX11-228ENST00000545115 PRKCHP24723 683 aa14.75□□□□□ -0.05
DDX11-228ENST00000545115 HOXD9P28356 352 aaPredicted RBP14.75□□□□□ -0.05
DDX11-228ENST00000545115 OXTRP30559 389 aa14.75□□□□□ -0.05
DDX11-228ENST00000545115 COPAP53621 1224 aa14.75□□□□□ -0.05
DDX11-228ENST00000545115 LRRC63Q05C16 580 aa14.75□□□□□ -0.05
DDX11-228ENST00000545115 BSPRYQ5W0U4 402 aa14.75□□□□□ -0.05
DDX11-228ENST00000545115 TMEM215Q68D42 235 aa14.75□□□□□ -0.05
DDX11-228ENST00000545115 FMR1NBQ8N0W7 255 aaPredicted RBP14.75□□□□□ -0.05
DDX11-228ENST00000545115 SIX6OS1Q8N1H7 587 aa14.75□□□□□ -0.05
DDX11-228ENST00000545115 SCML4Q8N228 414 aa14.75□□□□□ -0.05
DDX11-228ENST00000545115 KCTD13Q8WZ19 329 aa14.75□□□□□ -0.05
DDX11-228ENST00000545115 DNASE2BQ8WZ79 361 aa14.75□□□□□ -0.05
DDX11-228ENST00000545115 NDRG1Q92597 394 aaKnown RBP14.75□□□□□ -0.05
DDX11-228ENST00000545115 SLC35C1Q96A29 364 aa14.75□□□□□ -0.05
DDX11-228ENST00000545115 ZDHHC5Q9C0B5 715 aa14.75□□□□□ -0.05
DDX11-228ENST00000545115 CNGB3Q9NQW8 809 aa14.75□□□□□ -0.05
DDX11-228ENST00000545115 ABCC13Q9NSE7 274 aa14.75□□□□□ -0.05
DDX11-228ENST00000545115 ARMCX3Q9UH62 379 aaPredicted RBP14.75□□□□□ -0.05
DDX11-228ENST00000545115 SFMBT1Q9UHJ3 866 aa14.75□□□□□ -0.05
DDX11-228ENST00000545115 STOML2Q9UJZ1 356 aa14.75□□□□□ -0.05
DDX11-228ENST00000545115 CFAP47Q6ZTR5 3102 aa14.75□□□□□ -0.05
DDX11-228ENST00000545115 YJEFN3A6XGL0 299 aa14.74□□□□□ -0.05
DDX11-228ENST00000545115 E7ENQ6 273 aa14.74□□□□□ -0.05
DDX11-228ENST00000545115 O00370 1275 aa14.74□□□□□ -0.05
DDX11-228ENST00000545115 SMC2O95347 1197 aa14.74□□□□□ -0.05
DDX11-228ENST00000545115 LATS1O95835 1130 aa14.74□□□□□ -0.05
DDX11-228ENST00000545115 IGLV3-19P01714 112 aa14.74□□□□□ -0.05
DDX11-228ENST00000545115 HLA-FP30511 346 aa14.74□□□□□ -0.05
DDX11-228ENST00000545115 PMS1P54277 932 aaKnown RBP14.74□□□□□ -0.05
DDX11-228ENST00000545115 FAM193AP78312 1265 aa14.74□□□□□ -0.05
DDX11-228ENST00000545115 GRIK2Q13002 908 aa14.74□□□□□ -0.05
DDX11-228ENST00000545115 DCAF12L1Q5VU92 463 aa14.74□□□□□ -0.05
DDX11-228ENST00000545115 ANKRD40Q6AI12 368 aa14.74□□□□□ -0.05
DDX11-228ENST00000545115 CACUL1Q86Y37 369 aa14.74□□□□□ -0.05
DDX11-228ENST00000545115 ZCCHC9Q8N567 271 aaKnown RBP14.74□□□□□ -0.05
DDX11-228ENST00000545115 UBR7Q8N806 425 aa14.74□□□□□ -0.05
DDX11-228ENST00000545115 UBA3Q8TBC4 463 aa14.74□□□□□ -0.05
DDX11-228ENST00000545115 WFIKKN2Q8TEU8 576 aa14.74□□□□□ -0.05
DDX11-228ENST00000545115 SORCS1Q8WY21 1168 aa14.74□□□□□ -0.05
DDX11-228ENST00000545115 EDEM1Q92611 657 aa14.74□□□□□ -0.05
DDX11-228ENST00000545115 GTPBP4Q9BZE4 634 aaKnown RBP14.74□□□□□ -0.05
DDX11-228ENST00000545115 KLK13Q9UKR3 277 aa14.74□□□□□ -0.05
DDX11-228ENST00000545115 KIAA1257Q9ULG3 409 aa14.74□□□□□ -0.05
DDX11-228ENST00000545115 MSRB2Q9Y3D2 182 aa14.74□□□□□ -0.05
DDX11-228ENST00000545115 FRYQ5TBA9 3013 aa14.74□□□□□ -0.05
DDX11-228ENST00000545115 TRIM49BA6NDI0 452 aa14.73□□□□□ -0.05
DDX11-228ENST00000545115 GOLGA6L4A6NEF3 574 aa14.73□□□□□ -0.05
DDX11-228ENST00000545115 METTL12A8MUP2 240 aa14.73□□□□□ -0.05
DDX11-228ENST00000545115 MSI1O43347 362 aaKnown RBP14.73□□□□□ -0.05
DDX11-228ENST00000545115 TSPAN3O60637 253 aa14.73□□□□□ -0.05
DDX11-228ENST00000545115 PAEPP09466 180 aa14.73□□□□□ -0.05
DDX11-228ENST00000545115 DAOAP59103 153 aa14.73□□□□□ -0.05
DDX11-228ENST00000545115 LRMPQ12912 555 aa14.73□□□□□ -0.05
DDX11-228ENST00000545115 ZNF423Q2M1K9 1284 aa14.73□□□□□ -0.05
DDX11-228ENST00000545115 PKDCCQ504Y2 493 aa14.73□□□□□ -0.05
DDX11-228ENST00000545115 ADGRF1Q5T601 910 aa14.73□□□□□ -0.05
DDX11-228ENST00000545115 OR2T3Q8NH03 318 aa14.73□□□□□ -0.05
DDX11-228ENST00000545115 SPATA20Q8TB22 786 aa14.73□□□□□ -0.05
DDX11-228ENST00000545115 SMARCE1Q969G3 411 aa14.73□□□□□ -0.05
DDX11-228ENST00000545115 TMA16Q96EY4 203 aaKnown RBP14.73□□□□□ -0.05
DDX11-228ENST00000545115 NUP58Q9BVL2 599 aa14.73□□□□□ -0.05
DDX11-228ENST00000545115 MIR1-1HGQ9H1L0 117 aa14.73□□□□□ -0.05
DDX11-228ENST00000545115 METTL14Q9HCE5 456 aaKnown RBP14.73□□□□□ -0.05
DDX11-228ENST00000545115 CKAP5Q14008 2032 aa14.73□□□□□ -0.05
DDX11-228ENST00000545115 BCAT2O15382 392 aaPredicted RBP14.72□□□□□ -0.05
DDX11-228ENST00000545115 SH3BP5O60239 455 aa14.72□□□□□ -0.05
DDX11-228ENST00000545115 HLA-EP13747 358 aa14.72□□□□□ -0.05
DDX11-228ENST00000545115 LCP1P13796 627 aa14.72□□□□□ -0.05
DDX11-228ENST00000545115 FMO5P49326 533 aa14.72□□□□□ -0.05
DDX11-228ENST00000545115 CAMK2GQ13555 558 aaPredicted RBP14.72□□□□□ -0.05
DDX11-228ENST00000545115 STIM1Q13586 685 aa14.72□□□□□ -0.05
DDX11-228ENST00000545115 TRIP6Q15654 476 aaKnown RBP14.72□□□□□ -0.05
DDX11-228ENST00000545115 FNDC3BQ53EP0 1204 aaKnown RBP14.72□□□□□ -0.05
DDX11-228ENST00000545115 TMEM270Q6UE05 265 aa14.72□□□□□ -0.05
DDX11-228ENST00000545115 LCLAT1Q6UWP7 414 aa14.72□□□□□ -0.05
DDX11-228ENST00000545115 CHST9Q7L1S5 443 aa14.72□□□□□ -0.05
DDX11-228ENST00000545115 NAXDQ8IW45 347 aa14.72□□□□□ -0.05
DDX11-228ENST00000545115 AHI1Q8N157 1196 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms