RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	SPATA31A6	Q5VVP1	1343 aa		4.83	□□□□□ -1.64
RAP1B-231	ENST00000544639	TISP43	B9A030	160 aa		4.83	□□□□□ -1.64
RAP1B-231	ENST00000544639	UBE2Q2L	H0YL09	131 aa		4.83	□□□□□ -1.64
RAP1B-231	ENST00000544639		M0QYT0	321 aa		4.83	□□□□□ -1.64
RAP1B-231	ENST00000544639	CLIC1	O00299	241 aa		4.83	□□□□□ -1.64
RAP1B-231	ENST00000544639	NKX2-8	O15522	239 aa		4.83	□□□□□ -1.64
RAP1B-231	ENST00000544639	LARGE1	O95461	756 aa		4.83	□□□□□ -1.64
RAP1B-231	ENST00000544639	C1R	P00736	705 aa		4.83	□□□□□ -1.64
RAP1B-231	ENST00000544639	CHRM5	P08912	532 aa	Predicted RBP	4.83	□□□□□ -1.64
RAP1B-231	ENST00000544639	CDK7	P50613	346 aa		4.83	□□□□□ -1.64
RAP1B-231	ENST00000544639	WDR5	P61964	334 aa	Known RBP	4.83	□□□□□ -1.64
RAP1B-231	ENST00000544639	NHLH1	Q02575	133 aa		4.83	□□□□□ -1.64
RAP1B-231	ENST00000544639	TFF2	Q03403	129 aa		4.83	□□□□□ -1.64
RAP1B-231	ENST00000544639	SF3A3	Q12874	501 aa	Known RBP eCLIP	4.83	□□□□□ -1.64
RAP1B-231	ENST00000544639	CBFB	Q13951	182 aa		4.83	□□□□□ -1.64
RAP1B-231	ENST00000544639	TIGD6	Q17RP2	521 aa		4.83	□□□□□ -1.64
RAP1B-231	ENST00000544639	AAK1	Q2M2I8	961 aa		4.83	□□□□□ -1.64
RAP1B-231	ENST00000544639	PRAMEF17	Q5VTA0	474 aa		4.83	□□□□□ -1.64
RAP1B-231	ENST00000544639	LDHAL6A	Q6ZMR3	332 aa		4.83	□□□□□ -1.64
RAP1B-231	ENST00000544639	GALNT15	Q8N3T1	639 aa		4.83	□□□□□ -1.64
RAP1B-231	ENST00000544639	ADAMTS18	Q8TE60	1221 aa		4.83	□□□□□ -1.64
RAP1B-231	ENST00000544639	HIC2	Q96JB3	615 aa		4.83	□□□□□ -1.64
RAP1B-231	ENST00000544639	FAR2	Q96K12	515 aa		4.83	□□□□□ -1.64
RAP1B-231	ENST00000544639	CCDC17	Q96LX7	622 aa		4.83	□□□□□ -1.64
RAP1B-231	ENST00000544639	MECR	Q9BV79	373 aa		4.83	□□□□□ -1.64
RAP1B-231	ENST00000544639	ADGRE3	Q9BY15	652 aa		4.83	□□□□□ -1.64
RAP1B-231	ENST00000544639	C19orf53	Q9UNZ5	99 aa	Predicted RBP	4.83	□□□□□ -1.64
RAP1B-231	ENST00000544639	PCDHGB3	Q9Y5G1	929 aa		4.83	□□□□□ -1.64
RAP1B-231	ENST00000544639	COX11	Q9Y6N1	276 aa		4.83	□□□□□ -1.64
RAP1B-231	ENST00000544639	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	4.82	□□□□□ -1.64
RAP1B-231	ENST00000544639	SLC38A8	A6NNN8	435 aa		4.82	□□□□□ -1.64
RAP1B-231	ENST00000544639	DHRS4L1	P0CG22	281 aa		4.82	□□□□□ -1.64
RAP1B-231	ENST00000544639	CST5	P28325	142 aa	Predicted RBP	4.82	□□□□□ -1.64
RAP1B-231	ENST00000544639	ZRSR2	Q15696	482 aa	Known RBP	4.82	□□□□□ -1.64
RAP1B-231	ENST00000544639	AWAT1	Q58HT5	328 aa		4.82	□□□□□ -1.64
RAP1B-231	ENST00000544639	VSTM1	Q6UX27	236 aa		4.82	□□□□□ -1.64
RAP1B-231	ENST00000544639	KYAT3	Q6YP21	454 aa	Known RBP	4.82	□□□□□ -1.64
RAP1B-231	ENST00000544639	ZNF788	Q6ZQV5	615 aa		4.82	□□□□□ -1.64
RAP1B-231	ENST00000544639	CHSY1	Q86X52	802 aa		4.82	□□□□□ -1.64
RAP1B-231	ENST00000544639	PNLDC1	Q8NA58	520 aa	Known RBP	4.82	□□□□□ -1.64
RAP1B-231	ENST00000544639	HASPIN	Q8TF76	798 aa		4.82	□□□□□ -1.64
RAP1B-231	ENST00000544639	HMGB4	Q8WW32	186 aa		4.82	□□□□□ -1.64
RAP1B-231	ENST00000544639	AKAP1	Q92667	903 aa	Known RBP eCLIP	4.82	□□□□□ -1.64
RAP1B-231	ENST00000544639	NELL1	Q92832	810 aa		4.82	□□□□□ -1.64
RAP1B-231	ENST00000544639	TBC1D20	Q96BZ9	403 aa		4.82	□□□□□ -1.64
RAP1B-231	ENST00000544639	TRMT61A	Q96FX7	289 aa	Known RBP	4.82	□□□□□ -1.64
RAP1B-231	ENST00000544639	REXO5	Q96IC2	774 aa	Known RBP	4.82	□□□□□ -1.64
RAP1B-231	ENST00000544639	CCDC134	Q9H6E4	229 aa		4.82	□□□□□ -1.64
RAP1B-231	ENST00000544639	ELAC1	Q9H777	363 aa	Known RBP	4.82	□□□□□ -1.64
RAP1B-231	ENST00000544639	PCSK5	Q92824	1860 aa		4.81	□□□□□ -1.64
RAP1B-231	ENST00000544639	LOC102724159	A0A0B4J2E5	919 aa		4.81	□□□□□ -1.64
RAP1B-231	ENST00000544639	HMX3	A6NHT5	357 aa		4.81	□□□□□ -1.64
RAP1B-231	ENST00000544639	LINC01548	A6NM66	108 aa		4.81	□□□□□ -1.64
RAP1B-231	ENST00000544639	EFCAB8	A8MWE9	144 aa		4.81	□□□□□ -1.64
RAP1B-231	ENST00000544639		H0Y3Z8	333 aa		4.81	□□□□□ -1.64
RAP1B-231	ENST00000544639	FAM155B	O75949	473 aa		4.81	□□□□□ -1.64
RAP1B-231	ENST00000544639	NDUFS1	P28331	727 aa		4.81	□□□□□ -1.64
RAP1B-231	ENST00000544639	FAM3B	P58499	235 aa	Predicted RBP	4.81	□□□□□ -1.64
RAP1B-231	ENST00000544639	RPL15	P61313	204 aa	Known RBP	4.81	□□□□□ -1.64
RAP1B-231	ENST00000544639	TUBA4A	P68366	448 aa		4.81	□□□□□ -1.64
RAP1B-231	ENST00000544639	SLC14A1	Q13336	389 aa		4.81	□□□□□ -1.64
RAP1B-231	ENST00000544639	GAB1	Q13480	694 aa		4.81	□□□□□ -1.64
RAP1B-231	ENST00000544639	PWP2	Q15269	919 aa	Known RBP	4.81	□□□□□ -1.64
RAP1B-231	ENST00000544639	CNGA3	Q16281	694 aa		4.81	□□□□□ -1.64
RAP1B-231	ENST00000544639	CERKL	Q49MI3	558 aa	Predicted RBP	4.81	□□□□□ -1.64
RAP1B-231	ENST00000544639	TMEM119	Q4V9L6	283 aa		4.81	□□□□□ -1.64
RAP1B-231	ENST00000544639	ANKRD40	Q6AI12	368 aa		4.81	□□□□□ -1.64
RAP1B-231	ENST00000544639	RFX8	Q6ZV50	586 aa		4.81	□□□□□ -1.64
RAP1B-231	ENST00000544639	SUGP1	Q8IWZ8	645 aa	Known RBP	4.81	□□□□□ -1.64
RAP1B-231	ENST00000544639	SEMA6D	Q8NFY4	1073 aa		4.81	□□□□□ -1.64
RAP1B-231	ENST00000544639	PNISR	Q8TF01	805 aa	Known RBP	4.81	□□□□□ -1.64
RAP1B-231	ENST00000544639	TRAPPC9	Q96Q05	1148 aa		4.81	□□□□□ -1.64
RAP1B-231	ENST00000544639	ELOVL1	Q9BW60	279 aa		4.81	□□□□□ -1.64
RAP1B-231	ENST00000544639	SAYSD1	Q9NPB0	183 aa		4.81	□□□□□ -1.64
RAP1B-231	ENST00000544639	GPR52	Q9Y2T5	361 aa		4.81	□□□□□ -1.64
RAP1B-231	ENST00000544639	MANSC4	A6NHS7	340 aa	Predicted RBP	4.8	□□□□□ -1.64
RAP1B-231	ENST00000544639	C16orf96	A6NNT2	1141 aa		4.8	□□□□□ -1.64
RAP1B-231	ENST00000544639	PRRT4	C9JH25	899 aa		4.8	□□□□□ -1.64
RAP1B-231	ENST00000544639	TMEM232	C9JQI7	657 aa		4.8	□□□□□ -1.64
RAP1B-231	ENST00000544639	PRY	O14603	147 aa		4.8	□□□□□ -1.64
RAP1B-231	ENST00000544639	CYP2D6	P10635	497 aa		4.8	□□□□□ -1.64
RAP1B-231	ENST00000544639	CYP2A6	P11509	494 aa	Predicted RBP	4.8	□□□□□ -1.64
RAP1B-231	ENST00000544639	SFPQ	P23246	707 aa	Known RBP eCLIP	4.8	□□□□□ -1.64
RAP1B-231	ENST00000544639	ADD2	P35612	726 aa		4.8	□□□□□ -1.64
RAP1B-231	ENST00000544639	PRKAA2	P54646	552 aa		4.8	□□□□□ -1.64
RAP1B-231	ENST00000544639	RBM6	P78332	1123 aa	Known RBP	4.8	□□□□□ -1.64
RAP1B-231	ENST00000544639	TLE3	Q04726	772 aa		4.8	□□□□□ -1.64
RAP1B-231	ENST00000544639	GALNTL6	Q49A17	601 aa		4.8	□□□□□ -1.64
RAP1B-231	ENST00000544639	WDR93	Q6P2C0	686 aa		4.8	□□□□□ -1.64
RAP1B-231	ENST00000544639	RRAGA	Q7L523	313 aa		4.8	□□□□□ -1.64
RAP1B-231	ENST00000544639	PTF1A	Q7RTS3	328 aa		4.8	□□□□□ -1.64
RAP1B-231	ENST00000544639	LAS2	Q8IYD9	372 aa		4.8	□□□□□ -1.64
RAP1B-231	ENST00000544639	MYRIP	Q8NFW9	859 aa		4.8	□□□□□ -1.64
RAP1B-231	ENST00000544639	THAP4	Q8WY91	577 aa		4.8	□□□□□ -1.64
RAP1B-231	ENST00000544639	CPT1B	Q92523	772 aa		4.8	□□□□□ -1.64
RAP1B-231	ENST00000544639	RUBCN	Q92622	972 aa		4.8	□□□□□ -1.64
RAP1B-231	ENST00000544639	C3orf49	Q96BT1	292 aa		4.8	□□□□□ -1.64
RAP1B-231	ENST00000544639	ASB2	Q96Q27	587 aa		4.8	□□□□□ -1.64
RAP1B-231	ENST00000544639	BRD8	Q9H0E9	1235 aa		4.8	□□□□□ -1.64
RAP1B-231	ENST00000544639	ITM2C	Q9NQX7	267 aa		4.8	□□□□□ -1.64

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