RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 INSCQ1MX18 579 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 GALNT18Q6P9A2 607 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 FAM47EQ6ZV65 393 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 PDCD6IPQ8WUM4 868 aaKnown RBP8.02□□□□□ -1.13
VPS13D-211ENST00000543710 ATG4CQ96DT6 458 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 FAM210AQ96ND0 272 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 HEMGNQ9BXL5 484 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 ATXN3LQ9H3M9 355 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 EXO5Q9H790 373 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 PALMDQ9NP74 551 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 TBC1D3BA6NDS4 549 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 PRR23D1E9PI22 279 aaPredicted RBP8.02□□□□□ -1.13
VPS13D-211ENST00000543710 WNT10BO00744 389 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 TBC1D12O60347 775 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 TDP2O95551 362 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 NTSR2O95665 410 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 PRR23D2P0DMB1 279 aaPredicted RBP8.02□□□□□ -1.13
VPS13D-211ENST00000543710 CCDC130P13994 396 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 ADORA2BP29275 332 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 RBMS1P29558 406 aaKnown RBP8.02□□□□□ -1.13
VPS13D-211ENST00000543710 PRDX6P30041 224 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 HNRNPH1P31943 449 aaKnown RBP8.02□□□□□ -1.13
VPS13D-211ENST00000543710 RAB15P59190 212 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 XRCC4Q13426 336 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 PDPK2PQ6A1A2 396 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 ZCCHC8Q6NZY4 707 aaKnown RBP8.02□□□□□ -1.13
VPS13D-211ENST00000543710 AAGABQ6PD74 315 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 SPOCD1Q6ZMY3 1216 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 ACTRT2Q8TDY3 377 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 S100ZQ8WXG8 99 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 BTBD10Q9BSF8 475 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 H3BM21 787 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 GCNT1Q02742 428 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 CHI3L2Q15782 390 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 MEA1Q16626 185 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 MZT2AQ6P582 158 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 TTC33Q6PID6 262 aaPredicted RBP8.02□□□□□ -1.13
VPS13D-211ENST00000543710 STOX1Q6ZVD7 989 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 MYLK4Q86YV6 388 aaPredicted RBP8.02□□□□□ -1.13
VPS13D-211ENST00000543710 KATNAL2Q8IYT4 538 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 CLEC4FQ8N1N0 589 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 TSTD1Q8NFU3 115 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 SUN3Q8TAQ9 357 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 FUCA2Q9BTY2 467 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 UBXN6Q9BZV1 441 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 DCLK3Q9C098 648 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 TMEM134Q9H6X4 195 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 PDGFCQ9NRA1 345 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 TRMT6Q9UJA5 497 aaKnown RBP8.02□□□□□ -1.13
VPS13D-211ENST00000543710 PTCH2Q9Y6C5 1203 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 RIC1Q4ADV7 1423 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 SF3B1O75533 1304 aaKnown RBP eCLIP8.02□□□□□ -1.134e-6■■■■■ 144.6
VPS13D-211ENST00000543710 LOC102724159A0A0B4J2E5 919 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 DTNBO60941 627 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 RPN2P04844 631 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 FAM58BPP0C7Q3 252 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 PDGFRAP16234 1089 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 SLC11A2P49281 568 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 SARSP49591 514 aaKnown RBP8.02□□□□□ -1.13
VPS13D-211ENST00000543710 NCALDP61601 193 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 PTPN11Q06124 597 aaPredicted RBP8.02□□□□□ -1.13
VPS13D-211ENST00000543710 DPYSQ14117 519 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 GNA13Q14344 377 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 PWP2Q15269 919 aaKnown RBP8.02□□□□□ -1.13
VPS13D-211ENST00000543710 DNAJB7Q7Z6W7 309 aaPredicted RBP8.02□□□□□ -1.13
VPS13D-211ENST00000543710 MAFAQ8NHW3 353 aaPredicted RBP8.02□□□□□ -1.13
VPS13D-211ENST00000543710 C1orf50Q9BV19 199 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 MRIQ9BWK5 157 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 GPAMQ9HCL2 828 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 SSU72Q9NP77 194 aaKnown RBP8.02□□□□□ -1.13
VPS13D-211ENST00000543710 AHSPQ9NZD4 102 aa8.02□□□□□ -1.13
VPS13D-211ENST00000543710 SLC22A2O15244 555 aa8.01□□□□□ -1.13
VPS13D-211ENST00000543710 SERPINE1P05121 402 aa8.01□□□□□ -1.13
VPS13D-211ENST00000543710 FAM200BP0CF97 657 aa8.01□□□□□ -1.13
VPS13D-211ENST00000543710 HNF1BP35680 557 aa8.01□□□□□ -1.13
VPS13D-211ENST00000543710 BNIP2Q12982 314 aa8.01□□□□□ -1.13
VPS13D-211ENST00000543710 TAB1Q15750 504 aa8.01□□□□□ -1.13
VPS13D-211ENST00000543710 ZDHHC20Q5W0Z9 365 aa8.01□□□□□ -1.13
VPS13D-211ENST00000543710 FAM92BQ6ZTR7 304 aa8.01□□□□□ -1.13
VPS13D-211ENST00000543710 STK40Q8N2I9 435 aa8.01□□□□□ -1.13
VPS13D-211ENST00000543710 PPP1R16AQ96I34 528 aa8.01□□□□□ -1.13
VPS13D-211ENST00000543710 PLEKHA8Q96JA3 519 aa8.01□□□□□ -1.13
VPS13D-211ENST00000543710 FHOD1Q9Y613 1164 aa8.01□□□□□ -1.13
VPS13D-211ENST00000543710 CYP2D7A0A087X1C5 515 aa8.01□□□□□ -1.13
VPS13D-211ENST00000543710 BBIP1A8MTZ0 92 aa8.01□□□□□ -1.13
VPS13D-211ENST00000543710 FGF10O15520 208 aaPredicted RBP8.01□□□□□ -1.13
VPS13D-211ENST00000543710 LZTS3O60299 673 aaPredicted RBP8.01□□□□□ -1.13
VPS13D-211ENST00000543710 DNAJC6O75061 913 aa8.01□□□□□ -1.13
VPS13D-211ENST00000543710 PDHA1P08559 390 aa8.01□□□□□ -1.13
VPS13D-211ENST00000543710 MLNP12872 115 aa8.01□□□□□ -1.13
VPS13D-211ENST00000543710 LCP1P13796 627 aa8.01□□□□□ -1.13
VPS13D-211ENST00000543710 RASA1P20936 1047 aa8.01□□□□□ -1.13
VPS13D-211ENST00000543710 PTGER2P43116 358 aa8.01□□□□□ -1.13
VPS13D-211ENST00000543710 ANTXR2P58335 489 aa8.01□□□□□ -1.13
VPS13D-211ENST00000543710 CDK16Q00536 496 aa8.01□□□□□ -1.13
VPS13D-211ENST00000543710 GRB10Q13322 594 aa8.01□□□□□ -1.13
VPS13D-211ENST00000543710 ITGADQ13349 1161 aa8.01□□□□□ -1.13
VPS13D-211ENST00000543710 GRIK4Q16099 956 aa8.01□□□□□ -1.13
VPS13D-211ENST00000543710 DGUOKQ16854 277 aa8.01□□□□□ -1.13
VPS13D-211ENST00000543710 LONRF1Q17RB8 773 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms