RNA–Protein interactions for RNA: ENST00000543309.5

TRIM65-204, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-204ENST00000543309 DDX42Q86XP3 938 aaKnown RBP eCLIP16.64■□□□□ 0.25
TRIM65-204ENST00000543309 CMTM8Q8IZV2 173 aa16.64■□□□□ 0.25
TRIM65-204ENST00000543309 CCDC185Q8N715 623 aa16.64■□□□□ 0.25
TRIM65-204ENST00000543309 ARL14EPQ8N8R7 260 aaPredicted RBP16.64■□□□□ 0.25
TRIM65-204ENST00000543309 MAB21L3Q8N8X9 362 aa16.64■□□□□ 0.25
TRIM65-204ENST00000543309 EXD1Q8NHP7 514 aa16.64■□□□□ 0.25
TRIM65-204ENST00000543309 FAM71BQ8TC56 605 aa16.64■□□□□ 0.25
TRIM65-204ENST00000543309 KRT35Q92764 455 aa16.64■□□□□ 0.25
TRIM65-204ENST00000543309 RNF34Q969K3 372 aa16.64■□□□□ 0.25
TRIM65-204ENST00000543309 AZIN2Q96A70 460 aa16.64■□□□□ 0.25
TRIM65-204ENST00000543309 ZFRQ96KR1 1074 aaKnown RBP16.64■□□□□ 0.25
TRIM65-204ENST00000543309 HAPLN3Q96S86 360 aa16.64■□□□□ 0.25
TRIM65-204ENST00000543309 LRFN3Q9BTN0 628 aa16.64■□□□□ 0.25
TRIM65-204ENST00000543309 SNRNP25Q9BV90 132 aaKnown RBP16.64■□□□□ 0.25
TRIM65-204ENST00000543309 SLC46A2Q9BY10 475 aa16.64■□□□□ 0.25
TRIM65-204ENST00000543309 CARD9Q9H257 536 aa16.64■□□□□ 0.25
TRIM65-204ENST00000543309 ZWILCHQ9H900 591 aa16.64■□□□□ 0.25
TRIM65-204ENST00000543309 COX16Q9P0S2 106 aa16.64■□□□□ 0.25
TRIM65-204ENST00000543309 NUP210Q8TEM1 1887 aaPredicted RBP16.63■□□□□ 0.25
TRIM65-204ENST00000543309 ZNF487B1APH4 448 aa16.63■□□□□ 0.25
TRIM65-204ENST00000543309 NRG2O14511 850 aaPredicted RBP16.63■□□□□ 0.25
TRIM65-204ENST00000543309 LATS1O95835 1130 aa16.63■□□□□ 0.25
TRIM65-204ENST00000543309 CKMP06732 381 aa16.63■□□□□ 0.25
TRIM65-204ENST00000543309 RARAP10276 462 aa16.63■□□□□ 0.25
TRIM65-204ENST00000543309 MBL2P11226 248 aaPredicted RBP16.63■□□□□ 0.25
TRIM65-204ENST00000543309 GJA1P17302 382 aa16.63■□□□□ 0.25
TRIM65-204ENST00000543309 FSHRP23945 695 aa16.63■□□□□ 0.25
TRIM65-204ENST00000543309 AVPR1AP37288 418 aa16.63■□□□□ 0.25
TRIM65-204ENST00000543309 MTHFRP42898 656 aa16.63■□□□□ 0.25
TRIM65-204ENST00000543309 MARCKSL1P49006 195 aa16.63■□□□□ 0.25
TRIM65-204ENST00000543309 AMPD2Q01433 879 aa16.63■□□□□ 0.25
TRIM65-204ENST00000543309 PDK2Q15119 407 aa16.63■□□□□ 0.25
TRIM65-204ENST00000543309 DPYSL2Q16555 572 aa16.63■□□□□ 0.25
TRIM65-204ENST00000543309 ZC3H12AQ5D1E8 599 aaKnown RBP16.63■□□□□ 0.25
TRIM65-204ENST00000543309 EFHC2Q5JST6 749 aa16.63■□□□□ 0.25
TRIM65-204ENST00000543309 TXNRD3NBQ6F5E7 133 aa16.63■□□□□ 0.25
TRIM65-204ENST00000543309 RCOR2Q8IZ40 523 aa16.63■□□□□ 0.25
TRIM65-204ENST00000543309 SMRP1Q8NCR6 262 aa16.63■□□□□ 0.25
TRIM65-204ENST00000543309 RBM41Q96IZ5 413 aaKnown RBP16.63■□□□□ 0.25
TRIM65-204ENST00000543309 PBKQ96KB5 322 aa16.63■□□□□ 0.25
TRIM65-204ENST00000543309 BTN2A3PQ96KV6 586 aa16.63■□□□□ 0.25
TRIM65-204ENST00000543309 SLC22A12Q96S37 553 aa16.63■□□□□ 0.25
TRIM65-204ENST00000543309 CYP2S1Q96SQ9 504 aa16.63■□□□□ 0.25
TRIM65-204ENST00000543309 TKTL2Q9H0I9 626 aa16.63■□□□□ 0.25
TRIM65-204ENST00000543309 GDE1Q9NZC3 331 aa16.63■□□□□ 0.25
TRIM65-204ENST00000543309 SLC12A6Q9UHW9 1150 aa16.63■□□□□ 0.25
TRIM65-204ENST00000543309 ARHGAP26Q9UNA1 814 aa16.63■□□□□ 0.25
TRIM65-204ENST00000543309 AP4E1Q9UPM8 1137 aa16.63■□□□□ 0.25
TRIM65-204ENST00000543309 DENND4AQ7Z401 1863 aa16.63■□□□□ 0.25
TRIM65-204ENST00000543309 DOCK6Q96HP0 2047 aa16.62■□□□□ 0.25
TRIM65-204ENST00000543309 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.62■□□□□ 0.25
TRIM65-204ENST00000543309 KCNK3O14649 394 aa16.62■□□□□ 0.25
TRIM65-204ENST00000543309 STC2O76061 302 aa16.62■□□□□ 0.25
TRIM65-204ENST00000543309 ZRANB2O95218 330 aaKnown RBP eCLIP16.62■□□□□ 0.25
TRIM65-204ENST00000543309 TCF3P15923 654 aa16.62■□□□□ 0.25
TRIM65-204ENST00000543309 CEBPBP17676 345 aa16.62■□□□□ 0.25
TRIM65-204ENST00000543309 HARS2P49590 506 aaKnown RBP16.62■□□□□ 0.25
TRIM65-204ENST00000543309 COPS2P61201 443 aa16.62■□□□□ 0.25
TRIM65-204ENST00000543309 NRG1Q02297 640 aaPredicted RBP16.62■□□□□ 0.25
TRIM65-204ENST00000543309 DLX2Q07687 328 aaPredicted RBP16.62■□□□□ 0.25
TRIM65-204ENST00000543309 TUBB2AQ13885 445 aa16.62■□□□□ 0.25
TRIM65-204ENST00000543309 LEXMQ3ZCV2 418 aa16.62■□□□□ 0.25
TRIM65-204ENST00000543309 TMEM31Q5JXX7 168 aa16.62■□□□□ 0.25
TRIM65-204ENST00000543309 STXBP5Q5T5C0 1151 aa16.62■□□□□ 0.25
TRIM65-204ENST00000543309 MAP7D3Q8IWC1 876 aa16.62■□□□□ 0.25
TRIM65-204ENST00000543309 KIAA1958Q8N8K9 716 aa16.62■□□□□ 0.25
TRIM65-204ENST00000543309 ATP6V0D2Q8N8Y2 350 aa16.62■□□□□ 0.25
TRIM65-204ENST00000543309 ITFG1Q8TB96 612 aa16.62■□□□□ 0.25
TRIM65-204ENST00000543309 C1orf74Q96LT6 269 aa16.62■□□□□ 0.25
TRIM65-204ENST00000543309 NECTIN4Q96NY8 510 aa16.62■□□□□ 0.25
TRIM65-204ENST00000543309 OSBPL9Q96SU4 736 aa16.62■□□□□ 0.25
TRIM65-204ENST00000543309 TUBB2BQ9BVA1 445 aa16.62■□□□□ 0.25
TRIM65-204ENST00000543309 DCLK3Q9C098 648 aa16.62■□□□□ 0.25
TRIM65-204ENST00000543309 OSBPL2Q9H1P3 480 aa16.62■□□□□ 0.25
TRIM65-204ENST00000543309 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.62■□□□□ 0.25
TRIM65-204ENST00000543309 RCOR3Q9P2K3 495 aaPredicted RBP16.62■□□□□ 0.25
TRIM65-204ENST00000543309 HCN4Q9Y3Q4 1203 aa16.62■□□□□ 0.25
TRIM65-204ENST00000543309 ARIH1Q9Y4X5 557 aaPredicted RBP16.62■□□□□ 0.25
TRIM65-204ENST00000543309 SAR1BQ9Y6B6 198 aa16.62■□□□□ 0.25
TRIM65-204ENST00000543309 KRT1P04264 644 aa16.61■□□□□ 0.25
TRIM65-204ENST00000543309 HTR7P34969 479 aa16.61■□□□□ 0.25
TRIM65-204ENST00000543309 PTPN7P35236 360 aa16.61■□□□□ 0.25
TRIM65-204ENST00000543309 GJC1P36383 396 aa16.61■□□□□ 0.25
TRIM65-204ENST00000543309 CETN2P41208 172 aa16.61■□□□□ 0.25
TRIM65-204ENST00000543309 ARSEP51690 589 aa16.61■□□□□ 0.25
TRIM65-204ENST00000543309 CLUL1Q15846 466 aa16.61■□□□□ 0.25
TRIM65-204ENST00000543309 SMTNL2Q2TAL5 461 aa16.61■□□□□ 0.25
TRIM65-204ENST00000543309 ATP13A4Q4VNC1 1196 aa16.61■□□□□ 0.25
TRIM65-204ENST00000543309 ODF2Q5BJF6 829 aa16.61■□□□□ 0.25
TRIM65-204ENST00000543309 KCNT1Q5JUK3 1230 aa16.61■□□□□ 0.25
TRIM65-204ENST00000543309 DCAF12L1Q5VU92 463 aa16.61■□□□□ 0.25
TRIM65-204ENST00000543309 NPAS3Q8IXF0 933 aa16.61■□□□□ 0.25
TRIM65-204ENST00000543309 KCTD6Q8NC69 237 aa16.61■□□□□ 0.25
TRIM65-204ENST00000543309 HSPH1Q92598 858 aa16.61■□□□□ 0.25
TRIM65-204ENST00000543309 ZNF592Q92610 1267 aa16.61■□□□□ 0.25
TRIM65-204ENST00000543309 SLITRK6Q9H5Y7 841 aa16.61■□□□□ 0.25
TRIM65-204ENST00000543309 KIF9Q9HAQ2 790 aa16.61■□□□□ 0.25
TRIM65-204ENST00000543309 CD207Q9UJ71 328 aa16.61■□□□□ 0.25
TRIM65-204ENST00000543309 CPQQ9Y646 472 aa16.61■□□□□ 0.25
TRIM65-204ENST00000543309 LRRD1A4D1F6 860 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms