RNA–Protein interactions for RNA: ENST00000543239.1

CIT-212, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-212ENST00000543239 P2RY11Q96G91 374 aa16.91■□□□□ 0.3
CIT-212ENST00000543239 DDX50Q9BQ39 737 aaKnown RBP16.91■□□□□ 0.3
CIT-212ENST00000543239 SLC2A11Q9BYW1 496 aa16.91■□□□□ 0.3
CIT-212ENST00000543239 MYO6Q9UM54 1294 aa16.91■□□□□ 0.3
CIT-212ENST00000543239 TRIM24O15164 1050 aa16.9■□□□□ 0.3
CIT-212ENST00000543239 DAB1O75553 588 aa16.9■□□□□ 0.3
CIT-212ENST00000543239 SERPINC1P01008 464 aa16.9■□□□□ 0.3
CIT-212ENST00000543239 LMNAP02545 664 aaKnown RBP16.9■□□□□ 0.3
CIT-212ENST00000543239 APOEP02649 317 aa16.9■□□□□ 0.3
CIT-212ENST00000543239 CYP1A1P04798 512 aaPredicted RBP16.9■□□□□ 0.3
CIT-212ENST00000543239 CCDC172P0C7W6 258 aa16.9■□□□□ 0.3
CIT-212ENST00000543239 TIE1P35590 1138 aa16.9■□□□□ 0.3
CIT-212ENST00000543239 FNTBP49356 437 aa16.9■□□□□ 0.3
CIT-212ENST00000543239 FMO1Q01740 532 aa16.9■□□□□ 0.3
CIT-212ENST00000543239 EIF4EBP2Q13542 120 aaPredicted RBP16.9■□□□□ 0.3
CIT-212ENST00000543239 MPP7Q5T2T1 576 aa16.9■□□□□ 0.3
CIT-212ENST00000543239 ASCL5Q7RTU5 278 aa16.9■□□□□ 0.3
CIT-212ENST00000543239 LUZP1Q86V48 1076 aa16.9■□□□□ 0.3
CIT-212ENST00000543239 ALLCQ8N6M5 410 aa16.9■□□□□ 0.3
CIT-212ENST00000543239 ADAM32Q8TC27 787 aa16.9■□□□□ 0.3
CIT-212ENST00000543239 EPC1Q9H2F5 836 aa16.9■□□□□ 0.3
CIT-212ENST00000543239 RRN3Q9NYV6 651 aa16.9■□□□□ 0.3
CIT-212ENST00000543239 VPS13AQ96RL7 3174 aa16.9■□□□□ 0.3
CIT-212ENST00000543239 GOLGA6L19H0YKK7 550 aa16.89■□□□□ 0.29
CIT-212ENST00000543239 KLF8O95600 359 aaPredicted RBP16.89■□□□□ 0.29
CIT-212ENST00000543239 APBB3O95704 486 aa16.89■□□□□ 0.29
CIT-212ENST00000543239 SLC2A3P11169 496 aa16.89■□□□□ 0.29
CIT-212ENST00000543239 CHRNB2P17787 502 aa16.89■□□□□ 0.29
CIT-212ENST00000543239 HOXD9P28356 352 aaPredicted RBP16.89■□□□□ 0.29
CIT-212ENST00000543239 GBP1P32455 592 aa16.89■□□□□ 0.29
CIT-212ENST00000543239 NOS2P35228 1153 aa16.89■□□□□ 0.29
CIT-212ENST00000543239 DMWDQ09019 674 aa16.89■□□□□ 0.29
CIT-212ENST00000543239 CRY1Q16526 586 aa16.89■□□□□ 0.29
CIT-212ENST00000543239 FAM133BQ5BKY9 247 aaKnown RBP16.89■□□□□ 0.29
CIT-212ENST00000543239 EOGTQ5NDL2 527 aa16.89■□□□□ 0.29
CIT-212ENST00000543239 EMC10Q5UCC4 262 aa16.89■□□□□ 0.29
CIT-212ENST00000543239 NAA35Q5VZE5 725 aa16.89■□□□□ 0.29
CIT-212ENST00000543239 RNF43Q68DV7 783 aa16.89■□□□□ 0.29
CIT-212ENST00000543239 XYLT1Q86Y38 959 aa16.89■□□□□ 0.29
CIT-212ENST00000543239 CCDC33Q8N5R6 958 aa16.89■□□□□ 0.29
CIT-212ENST00000543239 ZNF513Q8N8E2 541 aaPredicted RBP16.89■□□□□ 0.29
CIT-212ENST00000543239 SUMF1Q8NBK3 374 aa16.89■□□□□ 0.29
CIT-212ENST00000543239 TXNDC5Q8NBS9 432 aaKnown RBP16.89■□□□□ 0.29
CIT-212ENST00000543239 TMA16Q96EY4 203 aaKnown RBP16.89■□□□□ 0.29
CIT-212ENST00000543239 FAM204AQ9H8W3 233 aa16.89■□□□□ 0.29
CIT-212ENST00000543239 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.89■□□□□ 0.29
CIT-212ENST00000543239 EBF1Q9UH73 591 aa16.89■□□□□ 0.29
CIT-212ENST00000543239 ANTXRLA6NF34 631 aa16.88■□□□□ 0.29
CIT-212ENST00000543239 PRRT4C9JH25 899 aa16.88■□□□□ 0.29
CIT-212ENST00000543239 TSPAN3O60637 253 aa16.88■□□□□ 0.29
CIT-212ENST00000543239 GRAP2O75791 330 aa16.88■□□□□ 0.29
CIT-212ENST00000543239 FERP16591 822 aa16.88■□□□□ 0.29
CIT-212ENST00000543239 MATKP42679 507 aa16.88■□□□□ 0.29
CIT-212ENST00000543239 DGKEP52429 567 aa16.88■□□□□ 0.29
CIT-212ENST00000543239 PITX1P78337 314 aaPredicted RBP16.88■□□□□ 0.29
CIT-212ENST00000543239 MTA1Q13330 715 aa16.88■□□□□ 0.29
CIT-212ENST00000543239 EIF4HQ15056 248 aaKnown RBP16.88■□□□□ 0.29
CIT-212ENST00000543239 FAM102AQ5T9C2 384 aaPredicted RBP16.88■□□□□ 0.29
CIT-212ENST00000543239 PIK3R6Q5UE93 754 aa16.88■□□□□ 0.29
CIT-212ENST00000543239 HEATR6Q6AI08 1181 aaKnown RBP16.88■□□□□ 0.29
CIT-212ENST00000543239 ANKS1BQ7Z6G8 1248 aa16.88■□□□□ 0.29
CIT-212ENST00000543239 ZNF557Q8N988 423 aaPredicted RBP16.88■□□□□ 0.29
CIT-212ENST00000543239 TSTD1Q8NFU3 115 aa16.88■□□□□ 0.29
CIT-212ENST00000543239 CPA5Q8WXQ8 436 aa16.88■□□□□ 0.29
CIT-212ENST00000543239 BTN2A3PQ96KV6 586 aa16.88■□□□□ 0.29
CIT-212ENST00000543239 NAP1L5Q96NT1 182 aaPredicted RBP16.88■□□□□ 0.29
CIT-212ENST00000543239 HHIPQ96QV1 700 aa16.88■□□□□ 0.29
CIT-212ENST00000543239 POLR3BQ9NW08 1133 aaPredicted RBP16.88■□□□□ 0.29
CIT-212ENST00000543239 TMEM51Q9NW97 253 aa16.88■□□□□ 0.29
CIT-212ENST00000543239 DDIT4Q9NX09 232 aa16.88■□□□□ 0.29
CIT-212ENST00000543239 STAP1Q9ULZ2 295 aa16.88■□□□□ 0.29
CIT-212ENST00000543239 ATG2BQ96BY7 2078 aa16.87■□□□□ 0.29
CIT-212ENST00000543239 TYW5A2RUC4 315 aaKnown RBP16.87■□□□□ 0.29
CIT-212ENST00000543239 SGK1O00141 431 aa16.87■□□□□ 0.29
CIT-212ENST00000543239 MOCS2O96007 188 aaPredicted RBP16.87■□□□□ 0.29
CIT-212ENST00000543239 UNGP13051 313 aaPredicted RBP16.87■□□□□ 0.29
CIT-212ENST00000543239 HNRNPLP14866 589 aaKnown RBP eCLIP16.87■□□□□ 0.29
CIT-212ENST00000543239 MMP8P22894 467 aa16.87■□□□□ 0.29
CIT-212ENST00000543239 SLC6A4P31645 630 aa16.87■□□□□ 0.29
CIT-212ENST00000543239 CCR1P32246 355 aa16.87■□□□□ 0.29
CIT-212ENST00000543239 ARID5AQ03989 594 aa16.87■□□□□ 0.29
CIT-212ENST00000543239 NR1I3Q14994 352 aa16.87■□□□□ 0.29
CIT-212ENST00000543239 E2F5Q15329 346 aa16.87■□□□□ 0.29
CIT-212ENST00000543239 ZC3H12AQ5D1E8 599 aaKnown RBP16.87■□□□□ 0.29
CIT-212ENST00000543239 NADSYN1Q6IA69 706 aa16.87■□□□□ 0.29
CIT-212ENST00000543239 RFWD3Q6PCD5 774 aa16.87■□□□□ 0.29
CIT-212ENST00000543239 ARCQ7LC44 396 aa16.87■□□□□ 0.29
CIT-212ENST00000543239 ATP6V0D2Q8N8Y2 350 aa16.87■□□□□ 0.29
CIT-212ENST00000543239 HJURPQ8NCD3 748 aaPredicted RBP16.87■□□□□ 0.29
CIT-212ENST00000543239 BAP1Q92560 729 aa16.87■□□□□ 0.29
CIT-212ENST00000543239 NT5C3BQ969T7 300 aa16.87■□□□□ 0.29
CIT-212ENST00000543239 NPY6RQ99463 290 aa16.87■□□□□ 0.29
CIT-212ENST00000543239 POLMQ9NP87 494 aaPredicted RBP16.87■□□□□ 0.29
CIT-212ENST00000543239 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.87■□□□□ 0.29
CIT-212ENST00000543239 SLC12A6Q9UHW9 1150 aa16.87■□□□□ 0.29
CIT-212ENST00000543239 HCN2Q9UL51 889 aa16.87■□□□□ 0.29
CIT-212ENST00000543239 ZFHX2Q9C0A1 2572 aaPredicted RBP16.86■□□□□ 0.29
CIT-212ENST00000543239 GOLGA6L7A0A1B0GV03 622 aa16.86■□□□□ 0.29
CIT-212ENST00000543239 KCNU1A8MYU2 1149 aa16.86■□□□□ 0.29
CIT-212ENST00000543239 NPC1O15118 1278 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms