RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 LINC00854A0A1B0GVQ3 168 aa19.83■□□□□ 0.76
HDAC4-215ENST00000543185 TNFRSF21O75509 655 aa19.83■□□□□ 0.76
HDAC4-215ENST00000543185 TCHHL1Q5QJ38 904 aaPredicted RBP19.83■□□□□ 0.76
HDAC4-215ENST00000543185 ARMCX6Q7L4S7 300 aa19.83■□□□□ 0.76
HDAC4-215ENST00000543185 ZNF512BQ96KM6 892 aaPredicted RBP19.83■□□□□ 0.76
HDAC4-215ENST00000543185 POU1F1P28069 291 aa19.83■□□□□ 0.76
HDAC4-215ENST00000543185 PROX1Q92786 737 aa19.83■□□□□ 0.76
HDAC4-215ENST00000543185 PPP1R14AQ96A00 147 aa19.83■□□□□ 0.76
HDAC4-215ENST00000543185 CIDEBQ9UHD4 219 aa19.83■□□□□ 0.76
HDAC4-215ENST00000543185 DLC1Q96QB1 1528 aa19.83■□□□□ 0.76
HDAC4-215ENST00000543185 THOC7Q6I9Y2 204 aaKnown RBP19.83■□□□□ 0.76
HDAC4-215ENST00000543185 CHCHD6Q9BRQ6 235 aa19.83■□□□□ 0.76
HDAC4-215ENST00000543185 TMEM216Q9P0N5 145 aa19.83■□□□□ 0.76
HDAC4-215ENST00000543185 TRDMT1O14717 391 aaKnown RBP19.82■□□□□ 0.76
HDAC4-215ENST00000543185 DDHD2O94830 711 aa19.82■□□□□ 0.76
HDAC4-215ENST00000543185 SEC24AO95486 1093 aa19.82■□□□□ 0.76
HDAC4-215ENST00000543185 ATXN8OSP0DMR3 200 aa19.82■□□□□ 0.76
HDAC4-215ENST00000543185 KPNA1P52294 538 aaPredicted RBP19.82■□□□□ 0.76
HDAC4-215ENST00000543185 SMAD1Q15797 465 aaKnown RBP19.82■□□□□ 0.76
HDAC4-215ENST00000543185 USPL1Q5W0Q7 1092 aa19.82■□□□□ 0.76
HDAC4-215ENST00000543185 SNX9Q9Y5X1 595 aa19.82■□□□□ 0.76
HDAC4-215ENST00000543185 TDP2O95551 362 aa19.82■□□□□ 0.76
HDAC4-215ENST00000543185 CSNK2BP67870 215 aa19.82■□□□□ 0.76
HDAC4-215ENST00000543185 TRAP1Q12931 704 aaKnown RBP19.82■□□□□ 0.76
HDAC4-215ENST00000543185 YAF2Q8IY57 180 aa19.82■□□□□ 0.76
HDAC4-215ENST00000543185 ITFG1Q8TB96 612 aa19.82■□□□□ 0.76
HDAC4-215ENST00000543185 HAT1O14929 419 aa19.82■□□□□ 0.76
HDAC4-215ENST00000543185 RAB15P59190 212 aa19.82■□□□□ 0.76
HDAC4-215ENST00000543185 RFX4Q33E94 735 aa19.82■□□□□ 0.76
HDAC4-215ENST00000543185 TKFCQ3LXA3 575 aa19.82■□□□□ 0.76
HDAC4-215ENST00000543185 FUKQ8N0W3 1084 aa19.82■□□□□ 0.76
HDAC4-215ENST00000543185 KLHL23Q8NBE8 558 aa19.82■□□□□ 0.76
HDAC4-215ENST00000543185 BORCS5Q969J3 196 aa19.82■□□□□ 0.76
HDAC4-215ENST00000543185 PSMG1O95456 288 aa19.82■□□□□ 0.76
HDAC4-215ENST00000543185 CCDC24Q8N4L8 307 aa19.82■□□□□ 0.76
HDAC4-215ENST00000543185 PJA1Q8NG27 643 aa19.82■□□□□ 0.76
HDAC4-215ENST00000543185 ROGDIQ9GZN7 287 aa19.82■□□□□ 0.76
HDAC4-215ENST00000543185 REEP1Q9H902 201 aa19.82■□□□□ 0.76
HDAC4-215ENST00000543185 NEK6Q9HC98 313 aa19.82■□□□□ 0.76
HDAC4-215ENST00000543185 TBC1D13Q9NVG8 400 aa19.82■□□□□ 0.76
HDAC4-215ENST00000543185 GALNT8Q9NY28 637 aa19.82■□□□□ 0.76
HDAC4-215ENST00000543185 WBP11Q9Y2W2 641 aaKnown RBP19.82■□□□□ 0.76
HDAC4-215ENST00000543185 SLC26A3P40879 764 aa19.82■□□□□ 0.76
HDAC4-215ENST00000543185 S100A13Q99584 98 aa19.82■□□□□ 0.76
HDAC4-215ENST00000543185 MAN1C1Q9NR34 630 aa19.82■□□□□ 0.76
HDAC4-215ENST00000543185 GJB4Q9NTQ9 266 aa19.82■□□□□ 0.76
HDAC4-215ENST00000543185 C3orf18Q9UK00 162 aa19.82■□□□□ 0.76
HDAC4-215ENST00000543185 ZNF335Q9H4Z2 1342 aaPredicted RBP19.82■□□□□ 0.76
HDAC4-215ENST00000543185 YWHAQP27348 245 aa19.82■□□□□ 0.76
HDAC4-215ENST00000543185 MGAT5Q09328 741 aa19.82■□□□□ 0.76
HDAC4-215ENST00000543185 SPANXN3Q5MJ09 141 aa19.82■□□□□ 0.76
HDAC4-215ENST00000543185 PLA2R1Q13018 1463 aa19.82■□□□□ 0.76
HDAC4-215ENST00000543185 H3BN98 237 aa19.81■□□□□ 0.76
HDAC4-215ENST00000543185 HS6ST1O60243 411 aa19.81■□□□□ 0.76
HDAC4-215ENST00000543185 SLAIN2Q9P270 581 aa19.81■□□□□ 0.76
HDAC4-215ENST00000543185 ODC1P11926 461 aa19.81■□□□□ 0.76
HDAC4-215ENST00000543185 GJA8P48165 433 aa19.81■□□□□ 0.76
HDAC4-215ENST00000543185 CDK16Q00536 496 aa19.81■□□□□ 0.76
HDAC4-215ENST00000543185 MPP3Q13368 585 aa19.81■□□□□ 0.76
HDAC4-215ENST00000543185 EMC2Q15006 297 aa19.81■□□□□ 0.76
HDAC4-215ENST00000543185 H7C1W4 665 aa19.81■□□□□ 0.76
HDAC4-215ENST00000543185 ASMTLO95671 621 aa19.81■□□□□ 0.76
HDAC4-215ENST00000543185 FAM220AQ7Z4H9 259 aa19.81■□□□□ 0.76
HDAC4-215ENST00000543185 TAF8Q7Z7C8 310 aa19.81■□□□□ 0.76
HDAC4-215ENST00000543185 ANKEF1Q9NU02 776 aa19.81■□□□□ 0.76
HDAC4-215ENST00000543185 CDH9Q9ULB4 789 aa19.81■□□□□ 0.76
HDAC4-215ENST00000543185 PP2D1A8MPX8 630 aa19.81■□□□□ 0.76
HDAC4-215ENST00000543185 MGRN1O60291 552 aa19.81■□□□□ 0.76
HDAC4-215ENST00000543185 FIG4Q92562 907 aa19.81■□□□□ 0.76
HDAC4-215ENST00000543185 B3GALT6Q96L58 329 aa19.81■□□□□ 0.76
HDAC4-215ENST00000543185 PTDSS1P48651 473 aaKnown RBP19.81■□□□□ 0.76
HDAC4-215ENST00000543185 ERAP2Q6P179 960 aa19.81■□□□□ 0.76
HDAC4-215ENST00000543185 VCPIP1Q96JH7 1222 aa19.81■□□□□ 0.76
HDAC4-215ENST00000543185 ZNF512Q96ME7 567 aaPredicted RBP19.81■□□□□ 0.76
HDAC4-215ENST00000543185 GPAMQ9HCL2 828 aa19.81■□□□□ 0.76
HDAC4-215ENST00000543185 SPAG4Q9NPE6 437 aa19.81■□□□□ 0.76
HDAC4-215ENST00000543185 PLA2G6O60733 806 aa19.81■□□□□ 0.76
HDAC4-215ENST00000543185 SLC15A2Q16348 729 aa19.81■□□□□ 0.76
HDAC4-215ENST00000543185 TTC23Q5W5X9 447 aa19.81■□□□□ 0.76
HDAC4-215ENST00000543185 SCUBE2Q9NQ36 999 aa19.81■□□□□ 0.76
HDAC4-215ENST00000543185 A0A087X1B8 175 aa19.81■□□□□ 0.76
HDAC4-215ENST00000543185 WFS1O76024 890 aa19.81■□□□□ 0.76
HDAC4-215ENST00000543185 GLP2RO95838 553 aa19.81■□□□□ 0.76
HDAC4-215ENST00000543185 ACADLP28330 430 aa19.81■□□□□ 0.76
HDAC4-215ENST00000543185 FAUP35544 74 aaKnown RBP19.81■□□□□ 0.76
HDAC4-215ENST00000543185 ARHGDIBP52566 201 aa19.81■□□□□ 0.76
HDAC4-215ENST00000543185 AENQ8WTP8 325 aaKnown RBP19.81■□□□□ 0.76
HDAC4-215ENST00000543185 NMRAL1Q9HBL8 299 aa19.81■□□□□ 0.76
HDAC4-215ENST00000543185 AASDHPPTQ9NRN7 309 aa19.81■□□□□ 0.76
HDAC4-215ENST00000543185 ITGA2P17301 1181 aa19.8■□□□□ 0.76
HDAC4-215ENST00000543185 ZNF135P52742 658 aaPredicted RBP19.8■□□□□ 0.76
HDAC4-215ENST00000543185 TYSND1Q2T9J0 566 aa19.8■□□□□ 0.76
HDAC4-215ENST00000543185 GOLGA7BQ2TAP0 167 aa19.8■□□□□ 0.76
HDAC4-215ENST00000543185 TNFAIP8L3Q5GJ75 292 aa19.8■□□□□ 0.76
HDAC4-215ENST00000543185 VPS51Q9UID3 782 aa19.8■□□□□ 0.76
HDAC4-215ENST00000543185 AGAP1Q9UPQ3 857 aa19.8■□□□□ 0.76
HDAC4-215ENST00000543185 DISP1Q96F81 1524 aa19.8■□□□□ 0.76
HDAC4-215ENST00000543185 PGAM1P18669 254 aa19.8■□□□□ 0.76
HDAC4-215ENST00000543185 RPA1P27694 616 aa19.8■□□□□ 0.76
HDAC4-215ENST00000543185 CDC16Q13042 620 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms