RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 CACNA1EQ15878 2313 aa16.31■□□□□ 0.2
VPS33A-206ENST00000542310 RNF225M0QZC1 329 aaPredicted RBP16.3■□□□□ 0.2
VPS33A-206ENST00000542310 BIN1O00499 593 aa16.3■□□□□ 0.2
VPS33A-206ENST00000542310 CDX4O14627 284 aaPredicted RBP16.3■□□□□ 0.2
VPS33A-206ENST00000542310 SART1O43290 800 aaKnown RBP16.3■□□□□ 0.2
VPS33A-206ENST00000542310 TIMM44O43615 452 aa16.3■□□□□ 0.2
VPS33A-206ENST00000542310 LTFP02788 710 aa16.3■□□□□ 0.2
VPS33A-206ENST00000542310 LCP1P13796 627 aa16.3■□□□□ 0.2
VPS33A-206ENST00000542310 KCNA4P22459 653 aa16.3■□□□□ 0.2
VPS33A-206ENST00000542310 IL12RB1P42701 662 aa16.3■□□□□ 0.2
VPS33A-206ENST00000542310 RPL34P49207 117 aaKnown RBP16.3■□□□□ 0.2
VPS33A-206ENST00000542310 UBE2HP62256 183 aa16.3■□□□□ 0.2
VPS33A-206ENST00000542310 IRX4P78413 519 aa16.3■□□□□ 0.2
VPS33A-206ENST00000542310 SHC2P98077 582 aa16.3■□□□□ 0.2
VPS33A-206ENST00000542310 ZNF33AQ06730 810 aa16.3■□□□□ 0.2
VPS33A-206ENST00000542310 NNTQ13423 1086 aa16.3■□□□□ 0.2
VPS33A-206ENST00000542310 DUOXA1Q1HG43 343 aa16.3■□□□□ 0.2
VPS33A-206ENST00000542310 FUT11Q495W5 492 aa16.3■□□□□ 0.2
VPS33A-206ENST00000542310 MPP7Q5T2T1 576 aa16.3■□□□□ 0.2
VPS33A-206ENST00000542310 ADGRF1Q5T601 910 aa16.3■□□□□ 0.2
VPS33A-206ENST00000542310 ENOSF1Q7L5Y1 443 aa16.3■□□□□ 0.2
VPS33A-206ENST00000542310 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.3■□□□□ 0.2
VPS33A-206ENST00000542310 CNTNAP3BQ96NU0 1288 aa16.3■□□□□ 0.2
VPS33A-206ENST00000542310 TRIM62Q9BVG3 475 aa16.3■□□□□ 0.2
VPS33A-206ENST00000542310 CNTNAP3Q9BZ76 1288 aa16.3■□□□□ 0.2
VPS33A-206ENST00000542310 INTS2Q9H0H0 1204 aaKnown RBP16.3■□□□□ 0.2
VPS33A-206ENST00000542310 ELOVL2Q9NXB9 296 aa16.3■□□□□ 0.2
VPS33A-206ENST00000542310 USP36Q9P275 1121 aaKnown RBP16.3■□□□□ 0.2
VPS33A-206ENST00000542310 CYP8B1Q9UNU6 501 aa16.3■□□□□ 0.2
VPS33A-206ENST00000542310 ADAMTS9Q9P2N4 1935 aa16.29■□□□□ 0.2
VPS33A-206ENST00000542310 ATXN2Q99700 1313 aaKnown RBP16.29■□□□□ 0.2
VPS33A-206ENST00000542310 IRAK2O43187 625 aa16.29■□□□□ 0.2
VPS33A-206ENST00000542310 MSI1O43347 362 aaKnown RBP16.29■□□□□ 0.2
VPS33A-206ENST00000542310 NCAM1P13591 858 aa16.29■□□□□ 0.2
VPS33A-206ENST00000542310 CSRP1P21291 193 aaKnown RBP16.29■□□□□ 0.2
VPS33A-206ENST00000542310 ITPKAP23677 461 aa16.29■□□□□ 0.2
VPS33A-206ENST00000542310 RGS7P49802 495 aa16.29■□□□□ 0.2
VPS33A-206ENST00000542310 STX17P56962 302 aa16.29■□□□□ 0.2
VPS33A-206ENST00000542310 ZNF234Q14588 700 aa16.29■□□□□ 0.2
VPS33A-206ENST00000542310 N4BP2L1Q5TBK1 243 aaPredicted RBP16.29■□□□□ 0.2
VPS33A-206ENST00000542310 KIAA1324Q6UXG2 1013 aaKnown RBP16.29■□□□□ 0.2
VPS33A-206ENST00000542310 BEND5Q7L4P6 421 aa16.29■□□□□ 0.2
VPS33A-206ENST00000542310 RRAGAQ7L523 313 aa16.29■□□□□ 0.2
VPS33A-206ENST00000542310 UNC45BQ8IWX7 931 aa16.29■□□□□ 0.2
VPS33A-206ENST00000542310 AZIN2Q96A70 460 aa16.29■□□□□ 0.2
VPS33A-206ENST00000542310 KREMEN1Q96MU8 473 aa16.29■□□□□ 0.2
VPS33A-206ENST00000542310 SRRTQ9BXP5 876 aaKnown RBP16.29■□□□□ 0.2
VPS33A-206ENST00000542310 PRDM16Q9HAZ2 1276 aa16.29■□□□□ 0.2
VPS33A-206ENST00000542310 TMEM74BQ9NUR3 256 aa16.29■□□□□ 0.2
VPS33A-206ENST00000542310 KIAA1468Q9P260 1216 aa16.29■□□□□ 0.2
VPS33A-206ENST00000542310 RWDD2AQ9UIY3 292 aa16.29■□□□□ 0.2
VPS33A-206ENST00000542310 ANGPTL2Q9UKU9 493 aa16.29■□□□□ 0.2
VPS33A-206ENST00000542310 NFE2L3Q9Y4A8 694 aa16.29■□□□□ 0.2
VPS33A-206ENST00000542310 NYNRINQ9P2P1 1898 aaKnown RBP16.29■□□□□ 0.2
VPS33A-206ENST00000542310 WASH3PC4AMC7 463 aa16.28■□□□□ 0.2
VPS33A-206ENST00000542310 MED7O43513 233 aa16.28■□□□□ 0.2
VPS33A-206ENST00000542310 SYNCRIPO60506 623 aaKnown RBP16.28■□□□□ 0.2
VPS33A-206ENST00000542310 GABBR2O75899 941 aa16.28■□□□□ 0.2
VPS33A-206ENST00000542310 IGLV3-19P01714 112 aa16.28■□□□□ 0.2
VPS33A-206ENST00000542310 SERPINF2P08697 491 aa16.28■□□□□ 0.2
VPS33A-206ENST00000542310 C7P10643 843 aa16.28■□□□□ 0.2
VPS33A-206ENST00000542310 ENGP17813 658 aa16.28■□□□□ 0.2
VPS33A-206ENST00000542310 ACADSBP45954 432 aa16.28■□□□□ 0.2
VPS33A-206ENST00000542310 SLC11A2P49281 568 aa16.28■□□□□ 0.2
VPS33A-206ENST00000542310 NOVA1P51513 510 aaKnown RBP16.28■□□□□ 0.2
VPS33A-206ENST00000542310 PSAPL1Q6NUJ1 521 aa16.28■□□□□ 0.2
VPS33A-206ENST00000542310 KIAA0907Q7Z7F0 614 aaPredicted RBP16.28■□□□□ 0.2
VPS33A-206ENST00000542310 SLC41A1Q8IVJ1 513 aa16.28■□□□□ 0.2
VPS33A-206ENST00000542310 AHI1Q8N157 1196 aa16.28■□□□□ 0.2
VPS33A-206ENST00000542310 STK32AQ8WU08 396 aa16.28■□□□□ 0.2
VPS33A-206ENST00000542310 FOXJ1Q92949 421 aa16.28■□□□□ 0.2
VPS33A-206ENST00000542310 ZNF419Q96HQ0 510 aaPredicted RBP16.28■□□□□ 0.2
VPS33A-206ENST00000542310 HSPA12BQ96MM6 686 aa16.28■□□□□ 0.2
VPS33A-206ENST00000542310 SERPINB11Q96P15 392 aa16.28■□□□□ 0.2
VPS33A-206ENST00000542310 CIPCQ9C0C6 399 aa16.28■□□□□ 0.2
VPS33A-206ENST00000542310 FBRSQ9HAH7 460 aa16.28■□□□□ 0.2
VPS33A-206ENST00000542310 CAPN10Q9HC96 672 aa16.28■□□□□ 0.2
VPS33A-206ENST00000542310 SUSD2Q9UGT4 822 aa16.28■□□□□ 0.2
VPS33A-206ENST00000542310 CLEC4EQ9ULY5 219 aa16.28■□□□□ 0.2
VPS33A-206ENST00000542310 SLC6A14Q9UN76 642 aa16.28■□□□□ 0.2
VPS33A-206ENST00000542310 GTPBP10A4D1E9 387 aaKnown RBP16.27■□□□□ 0.2
VPS33A-206ENST00000542310 UPK3BL1B0FP48 263 aa16.27■□□□□ 0.2
VPS33A-206ENST00000542310 UPK3BL2E5RIL1 263 aa16.27■□□□□ 0.2
VPS33A-206ENST00000542310 NDUFS2O75306 463 aa16.27■□□□□ 0.2
VPS33A-206ENST00000542310 CEACAM1P13688 526 aa16.27■□□□□ 0.2
VPS33A-206ENST00000542310 PRKCHP24723 683 aa16.27■□□□□ 0.2
VPS33A-206ENST00000542310 CD6P30203 668 aa16.27■□□□□ 0.2
VPS33A-206ENST00000542310 HLA-FP30511 346 aa16.27■□□□□ 0.2
VPS33A-206ENST00000542310 GPD2P43304 727 aa16.27■□□□□ 0.2
VPS33A-206ENST00000542310 ARID5AQ03989 594 aa16.27■□□□□ 0.2
VPS33A-206ENST00000542310 SYCP2LQ5T4T6 812 aa16.27■□□□□ 0.2
VPS33A-206ENST00000542310 TMEM215Q68D42 235 aa16.27■□□□□ 0.2
VPS33A-206ENST00000542310 SERPINA13PQ6UXR4 307 aa16.27■□□□□ 0.2
VPS33A-206ENST00000542310 CLEC4CQ8WTT0 213 aa16.27■□□□□ 0.2
VPS33A-206ENST00000542310 TMA16Q96EY4 203 aaKnown RBP16.27■□□□□ 0.2
VPS33A-206ENST00000542310 DDX50Q9BQ39 737 aaKnown RBP16.27■□□□□ 0.2
VPS33A-206ENST00000542310 MKRN2Q9H000 416 aaKnown RBP16.27■□□□□ 0.2
VPS33A-206ENST00000542310 SLC6A17Q9H1V8 727 aa16.27■□□□□ 0.2
VPS33A-206ENST00000542310 TYW5A2RUC4 315 aaKnown RBP16.26■□□□□ 0.19
VPS33A-206ENST00000542310 ACSL4O60488 711 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms