RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 MRPL42Q9Y6G3 142 aaKnown RBP4.49□□□□□ -1.69
SNHG1-219ENST00000542112 CNTNAP5Q8WYK1 1306 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 SALL3Q9BXA9 1300 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 LTBP3Q9NS15 1303 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 DLG5Q8TDM6 1919 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 LRRC7Q96NW7 1537 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 SH3D21A4FU49 640 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 LRRC72A6NJI9 287 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 TSPY2A6NKD2 308 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 C16orf96A6NNT2 1141 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 CAPN14A8MX76 684 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 VWA5AO00534 786 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 RASGRF2O14827 1237 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 CLOCKO15516 846 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 ADCY6O43306 1168 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 MTSS1O43312 755 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 MAGEC1O60732 1142 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 SLITRK3O94933 977 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 NDUFA10O95299 355 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 CAPNS1P04632 268 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 TSPY3P0CV98 308 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 TSPY8P0CW00 308 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 MYBP10242 640 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 MYBL1P10243 752 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 KRT10P13645 584 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 GLB1P16278 677 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 PDE6AP16499 860 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 CYP3A5P20815 502 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 JAK1P23458 1154 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 PSMA2P25787 234 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 HSD3B2P26439 372 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 EEF1GP26641 437 aaKnown RBP4.48□□□□□ -1.69
SNHG1-219ENST00000542112 PRDX6P30041 224 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 IDUAP35475 653 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 HNF1BP35680 557 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 GP5P40197 560 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 STAT1P42224 750 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 MAGEA11P43364 429 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 PREPP48147 710 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 RXRGP48443 463 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 VPS41P49754 854 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 RAP1GDS1P52306 607 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 ZNF143P52747 638 aaPredicted RBP4.48□□□□□ -1.69
SNHG1-219ENST00000542112 PMS1P54277 932 aaKnown RBP4.48□□□□□ -1.69
SNHG1-219ENST00000542112 ADKP55263 362 aaKnown RBP4.48□□□□□ -1.69
SNHG1-219ENST00000542112 AP1S2P56377 157 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 BPIFB3P59826 476 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 RAB14P61106 215 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 GABREP78334 506 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 CYP4F8P98187 520 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 INSM1Q01101 510 aaPredicted RBP4.48□□□□□ -1.69
SNHG1-219ENST00000542112 TSPY1Q01534 308 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 GHRHRQ02643 423 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 ZBTB16Q05516 673 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 ZNF844Q08AG5 666 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 ATP1A4Q13733 1029 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 SELPLGQ14242 412 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 C16orf72Q14CZ0 275 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 EFTUD2Q15029 972 aaKnown RBP eCLIP4.48□□□□□ -1.695e-23■■■■■ 42.3
SNHG1-219ENST00000542112 NKG7Q16617 165 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 DUSP7Q16829 419 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 KRT24Q2M2I5 525 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 TRMT5Q32P41 509 aaKnown RBP4.48□□□□□ -1.69
SNHG1-219ENST00000542112 LSM12Q3MHD2 195 aaKnown RBP4.48□□□□□ -1.69
SNHG1-219ENST00000542112 ANKRD20A4Q4UJ75 823 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 FAM76BQ5HYJ3 339 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 ZC3H12BQ5HYM0 836 aaKnown RBP4.48□□□□□ -1.69
SNHG1-219ENST00000542112 KCNT1Q5JUK3 1230 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 METTL24Q5JXM2 366 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 NT5DC1Q5TFE4 455 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 PRAMEF13Q5VWM6 474 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 KIAA1614Q5VZ46 1190 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 EGFLAMQ63HQ2 1017 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 FAM91A1Q658Y4 838 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 APOA5Q6Q788 366 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 RBM44Q6ZP01 1051 aaKnown RBP4.48□□□□□ -1.69
SNHG1-219ENST00000542112 PIK3AP1Q6ZUJ8 805 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 USP50Q70EL3 339 aaPredicted RBP4.48□□□□□ -1.69
SNHG1-219ENST00000542112 BTN2A1Q7KYR7 527 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 NIPA1Q7RTP0 329 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 PRUNE1Q86TP1 453 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 STK32CQ86UX6 486 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 ZNF410Q86VK4 478 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 VSIG1Q86XK7 387 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 UNC45BQ8IWX7 931 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 ADGRF2Q8IZF7 708 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 CENPSQ8N2Z9 138 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 CAMKK1Q8N5S9 505 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 FLCNQ8NFG4 579 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 RFWD2Q8NHY2 731 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 TEX47Q8TBZ9 253 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 PRPF31Q8WWY3 499 aaKnown RBP4.48□□□□□ -1.69
SNHG1-219ENST00000542112 JADE3Q92613 823 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 FAM46AQ96IP4 442 aaKnown RBP4.48□□□□□ -1.69
SNHG1-219ENST00000542112 CNDP2Q96KP4 475 aaKnown RBP4.48□□□□□ -1.69
SNHG1-219ENST00000542112 TSNARE1Q96NA8 513 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 TWNKQ96RR1 684 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 RANBP9Q96S59 729 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 RMDN3Q96TC7 470 aa4.48□□□□□ -1.69
SNHG1-219ENST00000542112 DNAJC7Q99615 494 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms