RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 P3H2Q8IVL5 708 aa4.16□□□□□ -1.74
LEMD3-204ENST00000542032 FAM9BQ8IZU0 186 aa4.16□□□□□ -1.74
LEMD3-204ENST00000542032 PJA1Q8NG27 643 aa4.16□□□□□ -1.74
LEMD3-204ENST00000542032 OVCA2Q8WZ82 227 aa4.16□□□□□ -1.74
LEMD3-204ENST00000542032 LRRC46Q96FV0 321 aa4.16□□□□□ -1.74
LEMD3-204ENST00000542032 FCRL5Q96RD9 977 aa4.16□□□□□ -1.74
LEMD3-204ENST00000542032 NAA15Q9BXJ9 866 aaKnown RBP4.16□□□□□ -1.74
LEMD3-204ENST00000542032 MAGEB5Q9BZ81 275 aa4.16□□□□□ -1.74
LEMD3-204ENST00000542032 GJB4Q9NTQ9 266 aa4.16□□□□□ -1.74
LEMD3-204ENST00000542032 HEY2Q9UBP5 337 aa4.16□□□□□ -1.74
LEMD3-204ENST00000542032 C2CD4BA6NLJ0 364 aa4.15□□□□□ -1.75
LEMD3-204ENST00000542032 PRYO14603 147 aa4.15□□□□□ -1.75
LEMD3-204ENST00000542032 INPPL1O15357 1258 aa4.15□□□□□ -1.75
LEMD3-204ENST00000542032 CCNT2O60583 730 aaKnown RBP4.15□□□□□ -1.75
LEMD3-204ENST00000542032 FGF2P09038 288 aa4.15□□□□□ -1.75
LEMD3-204ENST00000542032 MATN1P21941 496 aa4.15□□□□□ -1.75
LEMD3-204ENST00000542032 RPS6KB1P23443 525 aa4.15□□□□□ -1.75
LEMD3-204ENST00000542032 HOXA7P31268 230 aaPredicted RBP4.15□□□□□ -1.75
LEMD3-204ENST00000542032 IDUAP35475 653 aa4.15□□□□□ -1.75
LEMD3-204ENST00000542032 TM4SF4P48230 202 aa4.15□□□□□ -1.75
LEMD3-204ENST00000542032 CCT4P50991 539 aaKnown RBP4.15□□□□□ -1.75
LEMD3-204ENST00000542032 ZNF84P51523 738 aa4.15□□□□□ -1.75
LEMD3-204ENST00000542032 LINC00205P59089 165 aa4.15□□□□□ -1.75
LEMD3-204ENST00000542032 TMEM95Q3KNT9 176 aa4.15□□□□□ -1.75
LEMD3-204ENST00000542032 COBLL1Q53SF7 1204 aa4.15□□□□□ -1.75
LEMD3-204ENST00000542032 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.15□□□□□ -1.75
LEMD3-204ENST00000542032 MORC1Q86VD1 984 aa4.15□□□□□ -1.75
LEMD3-204ENST00000542032 C16orf71Q8IYS4 520 aaPredicted RBP4.15□□□□□ -1.75
LEMD3-204ENST00000542032 SNX27Q96L92 541 aa4.15□□□□□ -1.75
LEMD3-204ENST00000542032 NUDT22Q9BRQ3 303 aa4.15□□□□□ -1.75
LEMD3-204ENST00000542032 WACQ9BTA9 647 aa4.15□□□□□ -1.75
LEMD3-204ENST00000542032 EIF2AQ9BY44 585 aaKnown RBP4.15□□□□□ -1.75
LEMD3-204ENST00000542032 STARD7Q9NQZ5 370 aa4.15□□□□□ -1.75
LEMD3-204ENST00000542032 ZMYND8Q9ULU4 1186 aaPredicted RBP4.15□□□□□ -1.75
LEMD3-204ENST00000542032 FAM50BQ9Y247 325 aa4.15□□□□□ -1.75
LEMD3-204ENST00000542032 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.15□□□□□ -1.75
LEMD3-204ENST00000542032 SIRT4Q9Y6E7 314 aaPredicted RBP4.15□□□□□ -1.75
LEMD3-204ENST00000542032 RPS6KL1Q9Y6S9 549 aa4.15□□□□□ -1.75
LEMD3-204ENST00000542032 SPATA31A5Q5VU36 1347 aa4.15□□□□□ -1.75
LEMD3-204ENST00000542032 SPATA31A7Q8IWB4 1347 aa4.15□□□□□ -1.75
LEMD3-204ENST00000542032 TRIM38O00635 465 aa4.14□□□□□ -1.75
LEMD3-204ENST00000542032 APOL1O14791 398 aa4.14□□□□□ -1.75
LEMD3-204ENST00000542032 PMM2O15305 246 aa4.14□□□□□ -1.75
LEMD3-204ENST00000542032 NDST3O95803 873 aa4.14□□□□□ -1.75
LEMD3-204ENST00000542032 TOMM40O96008 361 aa4.14□□□□□ -1.75
LEMD3-204ENST00000542032 HOXD12P35452 270 aa4.14□□□□□ -1.75
LEMD3-204ENST00000542032 IGHMBP2P38935 993 aaKnown RBP4.14□□□□□ -1.75
LEMD3-204ENST00000542032 HTR3AP46098 478 aa4.14□□□□□ -1.75
LEMD3-204ENST00000542032 TRAPPC10P48553 1259 aa4.14□□□□□ -1.75
LEMD3-204ENST00000542032 STIM1Q13586 685 aa4.14□□□□□ -1.75
LEMD3-204ENST00000542032 GRAMD1BQ3KR37 738 aa4.14□□□□□ -1.75
LEMD3-204ENST00000542032 ZNF260Q3ZCT1 412 aa4.14□□□□□ -1.75
LEMD3-204ENST00000542032 SLC9C1Q4G0N8 1177 aa4.14□□□□□ -1.75
LEMD3-204ENST00000542032 TMEM196Q5HYL7 178 aa4.14□□□□□ -1.75
LEMD3-204ENST00000542032 ACSM6Q6P461 480 aa4.14□□□□□ -1.75
LEMD3-204ENST00000542032 ZNF517Q6ZMY9 492 aaPredicted RBP4.14□□□□□ -1.75
LEMD3-204ENST00000542032 PIK3AP1Q6ZUJ8 805 aa4.14□□□□□ -1.75
LEMD3-204ENST00000542032 ANKRD13BQ86YJ7 626 aa4.14□□□□□ -1.75
LEMD3-204ENST00000542032 RFX6Q8HWS3 928 aa4.14□□□□□ -1.75
LEMD3-204ENST00000542032 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.14□□□□□ -1.75
LEMD3-204ENST00000542032 GLIS1Q8NBF1 620 aa4.14□□□□□ -1.75
LEMD3-204ENST00000542032 MYRIPQ8NFW9 859 aa4.14□□□□□ -1.75
LEMD3-204ENST00000542032 GLMPQ8WWB7 406 aa4.14□□□□□ -1.75
LEMD3-204ENST00000542032 BRI3BPQ8WY22 251 aa4.14□□□□□ -1.75
LEMD3-204ENST00000542032 GJA10Q969M2 543 aa4.14□□□□□ -1.75
LEMD3-204ENST00000542032 TBCBQ99426 244 aa4.14□□□□□ -1.75
LEMD3-204ENST00000542032 TRMOQ9BU70 441 aa4.14□□□□□ -1.75
LEMD3-204ENST00000542032 PCDHAC1Q9H158 963 aa4.14□□□□□ -1.75
LEMD3-204ENST00000542032 CCDC187A0A096LP49 1063 aa4.13□□□□□ -1.75
LEMD3-204ENST00000542032 GXYLT2A0PJZ3 443 aa4.13□□□□□ -1.75
LEMD3-204ENST00000542032 M0QZQ0 153 aa4.13□□□□□ -1.75
LEMD3-204ENST00000542032 TLX3O43711 291 aaPredicted RBP4.13□□□□□ -1.75
LEMD3-204ENST00000542032 FGF18O76093 207 aa4.13□□□□□ -1.75
LEMD3-204ENST00000542032 IFIT2P09913 472 aaKnown RBP4.13□□□□□ -1.75
LEMD3-204ENST00000542032 CYP19A1P11511 503 aaPredicted RBP4.13□□□□□ -1.75
LEMD3-204ENST00000542032 PECAM1P16284 738 aaPredicted RBP4.13□□□□□ -1.75
LEMD3-204ENST00000542032 HOXB6P17509 224 aaKnown RBP4.13□□□□□ -1.75
LEMD3-204ENST00000542032 MMP8P22894 467 aa4.13□□□□□ -1.75
LEMD3-204ENST00000542032 BDNFP23560 247 aa4.13□□□□□ -1.75
LEMD3-204ENST00000542032 NDUFS1P28331 727 aa4.13□□□□□ -1.75
LEMD3-204ENST00000542032 SOX2P48431 317 aa4.13□□□□□ -1.75
LEMD3-204ENST00000542032 B4GALNT1Q00973 533 aa4.13□□□□□ -1.75
LEMD3-204ENST00000542032 IFIT5Q13325 482 aaKnown RBP4.13□□□□□ -1.75
LEMD3-204ENST00000542032 MTX1Q13505 466 aa4.13□□□□□ -1.75
LEMD3-204ENST00000542032 CNGA3Q16281 694 aa4.13□□□□□ -1.75
LEMD3-204ENST00000542032 HIBCHQ6NVY1 386 aaPredicted RBP4.13□□□□□ -1.75
LEMD3-204ENST00000542032 KRBA2Q6ZNG9 492 aa4.13□□□□□ -1.75
LEMD3-204ENST00000542032 RBM44Q6ZP01 1051 aaKnown RBP4.13□□□□□ -1.75
LEMD3-204ENST00000542032 LAS2Q8IYD9 372 aa4.13□□□□□ -1.75
LEMD3-204ENST00000542032 CCDC33Q8N5R6 958 aa4.13□□□□□ -1.75
LEMD3-204ENST00000542032 ARFGAP1Q8N6T3 406 aa4.13□□□□□ -1.75
LEMD3-204ENST00000542032 OR52L2PQ8NGH6 319 aa4.13□□□□□ -1.75
LEMD3-204ENST00000542032 SPATA3Q8NHX4 192 aa4.13□□□□□ -1.75
LEMD3-204ENST00000542032 MPLKIPQ8TAP9 179 aa4.13□□□□□ -1.75
LEMD3-204ENST00000542032 PPM1EQ8WY54 764 aa4.13□□□□□ -1.75
LEMD3-204ENST00000542032 ZNF845Q96IR2 970 aaPredicted RBP4.13□□□□□ -1.75
LEMD3-204ENST00000542032 SENP7Q9BQF6 1050 aa4.13□□□□□ -1.75
LEMD3-204ENST00000542032 PAAF1Q9BRP4 392 aa4.13□□□□□ -1.75
LEMD3-204ENST00000542032 ZBTB40Q9NUA8 1239 aa4.13□□□□□ -1.75
LEMD3-204ENST00000542032 ARL8BQ9NVJ2 186 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms