RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 MAP7D2Q96T17 732 aa5.94□□□□□ -1.46
CPSF7-220ENST00000541963 RAD9AQ99638 391 aa5.94□□□□□ -1.46
CPSF7-220ENST00000541963 FTHL17Q9BXU8 183 aa5.94□□□□□ -1.46
CPSF7-220ENST00000541963 FAM49AQ9H0Q0 323 aaPredicted RBP5.94□□□□□ -1.46
CPSF7-220ENST00000541963 FOXP1Q9H334 677 aaPredicted RBP5.94□□□□□ -1.46
CPSF7-220ENST00000541963 UNC45AQ9H3U1 944 aa5.94□□□□□ -1.46
CPSF7-220ENST00000541963 CD320Q9NPF0 282 aa5.94□□□□□ -1.46
CPSF7-220ENST00000541963 TDP1Q9NUW8 608 aa5.94□□□□□ -1.46
CPSF7-220ENST00000541963 ADAM29Q9UKF5 820 aa5.94□□□□□ -1.46
CPSF7-220ENST00000541963 NOL7Q9UMY1 257 aaKnown RBP5.94□□□□□ -1.46
CPSF7-220ENST00000541963 PCDHA12Q9UN75 941 aa5.94□□□□□ -1.46
CPSF7-220ENST00000541963 IPPQ9Y573 584 aa5.94□□□□□ -1.46
CPSF7-220ENST00000541963 INSL6Q9Y581 213 aa5.94□□□□□ -1.46
CPSF7-220ENST00000541963 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.94□□□□□ -1.46
CPSF7-220ENST00000541963 TRPV2Q9Y5S1 764 aa5.94□□□□□ -1.46
CPSF7-220ENST00000541963 MYH9P35579 1960 aaKnown RBP5.93□□□□□ -1.46
CPSF7-220ENST00000541963 SCN5AQ14524 2016 aa5.93□□□□□ -1.46
CPSF7-220ENST00000541963 NRP1O14786 923 aa5.93□□□□□ -1.46
CPSF7-220ENST00000541963 EDIL3O43854 480 aa5.93□□□□□ -1.46
CPSF7-220ENST00000541963 NUAK1O60285 661 aa5.93□□□□□ -1.46
CPSF7-220ENST00000541963 GASTP01350 101 aa5.93□□□□□ -1.46
CPSF7-220ENST00000541963 CHRNA1P02708 482 aa5.93□□□□□ -1.46
CPSF7-220ENST00000541963 JUNP05412 331 aaKnown RBP5.93□□□□□ -1.46
CPSF7-220ENST00000541963 KIR2DL3P43628 341 aa5.93□□□□□ -1.46
CPSF7-220ENST00000541963 QARSP47897 775 aaKnown RBP5.93□□□□□ -1.46
CPSF7-220ENST00000541963 TRAPPC10P48553 1259 aa5.93□□□□□ -1.46
CPSF7-220ENST00000541963 RABGGTBP53611 331 aa5.93□□□□□ -1.46
CPSF7-220ENST00000541963 WDR5P61964 334 aaKnown RBP5.93□□□□□ -1.46
CPSF7-220ENST00000541963 DUSP2Q05923 314 aa5.93□□□□□ -1.46
CPSF7-220ENST00000541963 PPP3CAQ08209 521 aa5.93□□□□□ -1.46
CPSF7-220ENST00000541963 MGAT3Q09327 533 aa5.93□□□□□ -1.46
CPSF7-220ENST00000541963 PPP2R5CQ13362 524 aa5.93□□□□□ -1.46
CPSF7-220ENST00000541963 ORC2Q13416 577 aaPredicted RBP5.93□□□□□ -1.46
CPSF7-220ENST00000541963 GPNMBQ14956 572 aa5.93□□□□□ -1.46
CPSF7-220ENST00000541963 ZNF648Q5T619 568 aaPredicted RBP5.93□□□□□ -1.46
CPSF7-220ENST00000541963 AGBL4Q5VU57 503 aa5.93□□□□□ -1.46
CPSF7-220ENST00000541963 EFCAB12Q6NXP0 572 aa5.93□□□□□ -1.46
CPSF7-220ENST00000541963 BORAQ6PGQ7 559 aa5.93□□□□□ -1.46
CPSF7-220ENST00000541963 B3GNT9Q6UX72 402 aa5.93□□□□□ -1.46
CPSF7-220ENST00000541963 TSHZ1Q6ZSZ6 1077 aa5.93□□□□□ -1.46
CPSF7-220ENST00000541963 LARP4Q71RC2 724 aaKnown RBP eCLIP5.93□□□□□ -1.46
CPSF7-220ENST00000541963 PDZD4Q76G19 769 aaPredicted RBP5.93□□□□□ -1.46
CPSF7-220ENST00000541963 SRGAP1Q7Z6B7 1085 aa5.93□□□□□ -1.46
CPSF7-220ENST00000541963 DENND1CQ8IV53 801 aa5.93□□□□□ -1.46
CPSF7-220ENST00000541963 MYOCDQ8IZQ8 938 aa5.93□□□□□ -1.46
CPSF7-220ENST00000541963 LINC01356Q8N9X3 169 aa5.93□□□□□ -1.46
CPSF7-220ENST00000541963 PIK3C3Q8NEB9 887 aa5.93□□□□□ -1.46
CPSF7-220ENST00000541963 FBXO18Q8NFZ0 1043 aa5.93□□□□□ -1.46
CPSF7-220ENST00000541963 ETNPPLQ8TBG4 499 aa5.93□□□□□ -1.46
CPSF7-220ENST00000541963 CDX2Q99626 313 aaPredicted RBP5.93□□□□□ -1.46
CPSF7-220ENST00000541963 ACO2Q99798 780 aaKnown RBP5.93□□□□□ -1.46
CPSF7-220ENST00000541963 IFIH1Q9BYX4 1025 aaKnown RBP5.93□□□□□ -1.46
CPSF7-220ENST00000541963 ARNT2Q9HBZ2 717 aa5.93□□□□□ -1.46
CPSF7-220ENST00000541963 KCNMB3Q9NPA1 279 aa5.93□□□□□ -1.46
CPSF7-220ENST00000541963 GJB4Q9NTQ9 266 aa5.93□□□□□ -1.46
CPSF7-220ENST00000541963 SMC3Q9UQE7 1217 aa5.93□□□□□ -1.46
CPSF7-220ENST00000541963 POLHQ9Y253 713 aa5.93□□□□□ -1.46
CPSF7-220ENST00000541963 PCDHA13Q9Y5I0 950 aa5.93□□□□□ -1.46
CPSF7-220ENST00000541963 IGSF9BQ9UPX0 1349 aa5.93□□□□□ -1.46
CPSF7-220ENST00000541963 KDM3AQ9Y4C1 1321 aa5.93□□□□□ -1.46
CPSF7-220ENST00000541963 TANC1Q9C0D5 1861 aa5.92□□□□□ -1.46
CPSF7-220ENST00000541963 MROH6A6NGR9 719 aa5.92□□□□□ -1.46
CPSF7-220ENST00000541963 H3BML4 177 aa5.92□□□□□ -1.46
CPSF7-220ENST00000541963 H3BQV1 296 aa5.92□□□□□ -1.46
CPSF7-220ENST00000541963 FFAR3O14843 346 aa5.92□□□□□ -1.46
CPSF7-220ENST00000541963 SLC16A6O15403 523 aa5.92□□□□□ -1.46
CPSF7-220ENST00000541963 SLC37A4O43826 429 aa5.92□□□□□ -1.46
CPSF7-220ENST00000541963 NEMFO60524 1076 aa5.92□□□□□ -1.46
CPSF7-220ENST00000541963 TMEM127O75204 238 aa5.92□□□□□ -1.46
CPSF7-220ENST00000541963 RPS6KA5O75582 802 aa5.92□□□□□ -1.46
CPSF7-220ENST00000541963 GJB5O95377 273 aa5.92□□□□□ -1.46
CPSF7-220ENST00000541963 STAG3L1P0CL83 205 aa5.92□□□□□ -1.46
CPSF7-220ENST00000541963 GHRP10912 638 aa5.92□□□□□ -1.46
CPSF7-220ENST00000541963 XRCC6P12956 609 aaKnown RBP eCLIP5.92□□□□□ -1.46
CPSF7-220ENST00000541963 FOSL2P15408 326 aa5.92□□□□□ -1.46
CPSF7-220ENST00000541963 GYPEP15421 78 aa5.92□□□□□ -1.46
CPSF7-220ENST00000541963 CSF2RBP32927 897 aa5.92□□□□□ -1.46
CPSF7-220ENST00000541963 TXKP42681 527 aa5.92□□□□□ -1.46
CPSF7-220ENST00000541963 IL12RB1P42701 662 aa5.92□□□□□ -1.46
CPSF7-220ENST00000541963 CRYBB1P53674 252 aaPredicted RBP5.92□□□□□ -1.46
CPSF7-220ENST00000541963 BPIFB4P59827 614 aa5.92□□□□□ -1.46
CPSF7-220ENST00000541963 ATP2C1P98194 919 aaPredicted RBP5.92□□□□□ -1.46
CPSF7-220ENST00000541963 GUCY1B3Q02153 619 aa5.92□□□□□ -1.46
CPSF7-220ENST00000541963 PRKCEQ02156 737 aa5.92□□□□□ -1.46
CPSF7-220ENST00000541963 DLX2Q07687 328 aaPredicted RBP5.92□□□□□ -1.46
CPSF7-220ENST00000541963 IL10RAQ13651 578 aa5.92□□□□□ -1.46
CPSF7-220ENST00000541963 LPIN1Q14693 890 aa5.92□□□□□ -1.46
CPSF7-220ENST00000541963 GRM3Q14832 879 aa5.92□□□□□ -1.46
CPSF7-220ENST00000541963 TMEM266Q2M3C6 531 aa5.92□□□□□ -1.46
CPSF7-220ENST00000541963 C3orf36Q3SXR2 165 aa5.92□□□□□ -1.46
CPSF7-220ENST00000541963 FBXO47Q5MNV8 452 aa5.92□□□□□ -1.46
CPSF7-220ENST00000541963 NCAPH2Q6IBW4 605 aa5.92□□□□□ -1.46
CPSF7-220ENST00000541963 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.92□□□□□ -1.46
CPSF7-220ENST00000541963 GPR155Q7Z3F1 870 aa5.92□□□□□ -1.46
CPSF7-220ENST00000541963 C4orf19Q8IY42 314 aa5.92□□□□□ -1.46
CPSF7-220ENST00000541963 KIAA0319LQ8IZA0 1049 aa5.92□□□□□ -1.46
CPSF7-220ENST00000541963 ADGRG2Q8IZP9 1017 aa5.92□□□□□ -1.46
CPSF7-220ENST00000541963 PQLC1Q8N2U9 271 aa5.92□□□□□ -1.46
CPSF7-220ENST00000541963 ZBTB34Q8NCN2 500 aa5.92□□□□□ -1.46
CPSF7-220ENST00000541963 ERMNQ8TAM6 284 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms