RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 RCCD1A6NED2 376 aa15.33■□□□□ 0.05
SMARCA4-207ENST00000541122 M0QYT0 321 aa15.33■□□□□ 0.05
SMARCA4-207ENST00000541122 PMPCBO75439 489 aa15.33■□□□□ 0.05
SMARCA4-207ENST00000541122 LCA5LO95447 670 aa15.33■□□□□ 0.05
SMARCA4-207ENST00000541122 NTSR2O95665 410 aa15.33■□□□□ 0.05
SMARCA4-207ENST00000541122 ETS1P14921 441 aa15.33■□□□□ 0.05
SMARCA4-207ENST00000541122 PIK3R1P27986 724 aa15.33■□□□□ 0.05
SMARCA4-207ENST00000541122 BAG6P46379 1132 aa15.33■□□□□ 0.05
SMARCA4-207ENST00000541122 WASHC5Q12768 1159 aa15.33■□□□□ 0.05
SMARCA4-207ENST00000541122 GALNTL6Q49A17 601 aa15.33■□□□□ 0.05
SMARCA4-207ENST00000541122 SGO1Q5FBB7 561 aa15.33■□□□□ 0.05
SMARCA4-207ENST00000541122 SCARA3Q6AZY7 606 aa15.33■□□□□ 0.05
SMARCA4-207ENST00000541122 OLFML1Q6UWY5 402 aa15.33■□□□□ 0.05
SMARCA4-207ENST00000541122 MFSD7Q6UXD7 560 aa15.33■□□□□ 0.05
SMARCA4-207ENST00000541122 CYP4Z1Q86W10 505 aa15.33■□□□□ 0.05
SMARCA4-207ENST00000541122 APOBEC3FQ8IUX4 373 aaKnown RBP15.33■□□□□ 0.05
SMARCA4-207ENST00000541122 KLHL23Q8NBE8 558 aa15.33■□□□□ 0.05
SMARCA4-207ENST00000541122 ENKURQ8TC29 256 aa15.33■□□□□ 0.05
SMARCA4-207ENST00000541122 BAP1Q92560 729 aa15.33■□□□□ 0.05
SMARCA4-207ENST00000541122 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.33■□□□□ 0.05
SMARCA4-207ENST00000541122 SYNDIG1LA6NDD5 238 aa15.33■□□□□ 0.04
SMARCA4-207ENST00000541122 TMEM114B3SHH9 223 aa15.33■□□□□ 0.04
SMARCA4-207ENST00000541122 ALOX12P18054 663 aa15.33■□□□□ 0.04
SMARCA4-207ENST00000541122 ZDHHC13Q8IUH4 622 aa15.33■□□□□ 0.04
SMARCA4-207ENST00000541122 PRKD2Q9BZL6 878 aa15.33■□□□□ 0.04
SMARCA4-207ENST00000541122 BLOC1S4Q9NUP1 217 aa15.33■□□□□ 0.04
SMARCA4-207ENST00000541122 TAF4O00268 1085 aa15.33■□□□□ 0.04
SMARCA4-207ENST00000541122 BAIAP3O94812 1187 aa15.33■□□□□ 0.04
SMARCA4-207ENST00000541122 PGM3O95394 542 aa15.33■□□□□ 0.04
SMARCA4-207ENST00000541122 CYP1A2P05177 515 aa15.33■□□□□ 0.04
SMARCA4-207ENST00000541122 MTTPP55157 894 aa15.33■□□□□ 0.04
SMARCA4-207ENST00000541122 ACVR2BQ13705 512 aa15.33■□□□□ 0.04
SMARCA4-207ENST00000541122 CSHL1Q14406 222 aa15.33■□□□□ 0.04
SMARCA4-207ENST00000541122 QPCTQ16769 361 aa15.33■□□□□ 0.04
SMARCA4-207ENST00000541122 EARS2Q5JPH6 523 aaKnown RBP15.33■□□□□ 0.04
SMARCA4-207ENST00000541122 ZNF513Q8N8E2 541 aaPredicted RBP15.33■□□□□ 0.04
SMARCA4-207ENST00000541122 MCRS1Q96EZ8 462 aa15.33■□□□□ 0.04
SMARCA4-207ENST00000541122 ANAPC2Q9UJX6 822 aa15.33■□□□□ 0.04
SMARCA4-207ENST00000541122 DIP2BQ9P265 1576 aa15.33■□□□□ 0.04
SMARCA4-207ENST00000541122 MGRN1O60291 552 aa15.32■□□□□ 0.04
SMARCA4-207ENST00000541122 CYP2C9P11712 490 aa15.32■□□□□ 0.04
SMARCA4-207ENST00000541122 COX4I1P13073 169 aa15.32■□□□□ 0.04
SMARCA4-207ENST00000541122 NCAM1P13591 858 aa15.32■□□□□ 0.04
SMARCA4-207ENST00000541122 CYP2F1P24903 491 aa15.32■□□□□ 0.04
SMARCA4-207ENST00000541122 ZRANB3Q5FWF4 1079 aa15.32■□□□□ 0.04
SMARCA4-207ENST00000541122 OTUD3Q5T2D3 398 aaPredicted RBP15.32■□□□□ 0.04
SMARCA4-207ENST00000541122 STK32CQ86UX6 486 aa15.32■□□□□ 0.04
SMARCA4-207ENST00000541122 ULK2Q8IYT8 1036 aa15.32■□□□□ 0.04
SMARCA4-207ENST00000541122 SFRP1Q8N474 314 aa15.32■□□□□ 0.04
SMARCA4-207ENST00000541122 RXFP2Q8WXD0 754 aa15.32■□□□□ 0.04
SMARCA4-207ENST00000541122 APOL5Q9BWW9 433 aa15.32■□□□□ 0.04
SMARCA4-207ENST00000541122 CISHQ9NSE2 258 aa15.32■□□□□ 0.04
SMARCA4-207ENST00000541122 SH3GLB1Q9Y371 365 aa15.32■□□□□ 0.04
SMARCA4-207ENST00000541122 C2orf81A6NN90 581 aa15.32■□□□□ 0.04
SMARCA4-207ENST00000541122 TRIM38O00635 465 aa15.32■□□□□ 0.04
SMARCA4-207ENST00000541122 HBP1O60381 514 aa15.32■□□□□ 0.04
SMARCA4-207ENST00000541122 ATG7O95352 703 aa15.32■□□□□ 0.04
SMARCA4-207ENST00000541122 TXNP10599 105 aaKnown RBP15.32■□□□□ 0.04
SMARCA4-207ENST00000541122 HOXB8P17481 243 aaPredicted RBP15.32■□□□□ 0.04
SMARCA4-207ENST00000541122 CDH3P22223 829 aa15.32■□□□□ 0.04
SMARCA4-207ENST00000541122 ADSSP30520 456 aa15.32■□□□□ 0.04
SMARCA4-207ENST00000541122 MYL6P60660 151 aa15.32■□□□□ 0.04
SMARCA4-207ENST00000541122 NANOGNBQ7Z5D8 188 aa15.32■□□□□ 0.04
SMARCA4-207ENST00000541122 DNAAF5Q86Y56 855 aa15.32■□□□□ 0.04
SMARCA4-207ENST00000541122 C4orf19Q8IY42 314 aa15.32■□□□□ 0.04
SMARCA4-207ENST00000541122 SEPHS2Q99611 448 aa15.32■□□□□ 0.04
SMARCA4-207ENST00000541122 GINS4Q9BRT9 223 aa15.32■□□□□ 0.04
SMARCA4-207ENST00000541122 ADAM28Q9UKQ2 775 aa15.32■□□□□ 0.04
SMARCA4-207ENST00000541122 FAM237BA0A1B0GVD1 139 aa15.32■□□□□ 0.04
SMARCA4-207ENST00000541122 NME5P56597 212 aa15.32■□□□□ 0.04
SMARCA4-207ENST00000541122 FOLH1Q04609 750 aa15.32■□□□□ 0.04
SMARCA4-207ENST00000541122 CDH17Q12864 832 aa15.32■□□□□ 0.04
SMARCA4-207ENST00000541122 ELMSAN1Q6PJG2 1045 aa15.32■□□□□ 0.04
SMARCA4-207ENST00000541122 PRELID2Q8N945 189 aa15.32■□□□□ 0.04
SMARCA4-207ENST00000541122 KRCC1Q9NPI7 259 aaPredicted RBP15.32■□□□□ 0.04
SMARCA4-207ENST00000541122 LINC00854A0A1B0GVQ3 168 aa15.32■□□□□ 0.04
SMARCA4-207ENST00000541122 TCRBV5S4A2TA0A5A2 114 aa15.32■□□□□ 0.04
SMARCA4-207ENST00000541122 ZNF682O95780 498 aa15.32■□□□□ 0.04
SMARCA4-207ENST00000541122 BCAT1P54687 386 aa15.32■□□□□ 0.04
SMARCA4-207ENST00000541122 ZNF846Q147U1 533 aa15.32■□□□□ 0.04
SMARCA4-207ENST00000541122 ACCSLQ4AC99 568 aa15.32■□□□□ 0.04
SMARCA4-207ENST00000541122 FAM13CQ8NE31 585 aa15.32■□□□□ 0.04
SMARCA4-207ENST00000541122 RP9Q8TA86 221 aaKnown RBP15.32■□□□□ 0.04
SMARCA4-207ENST00000541122 WDCPQ9H6R7 721 aa15.32■□□□□ 0.04
SMARCA4-207ENST00000541122 NMRAL1Q9HBL8 299 aa15.32■□□□□ 0.04
SMARCA4-207ENST00000541122 TBC1D13Q9NVG8 400 aa15.32■□□□□ 0.04
SMARCA4-207ENST00000541122 BTBD3Q9Y2F9 522 aa15.32■□□□□ 0.04
SMARCA4-207ENST00000541122 HBS1LQ9Y450 684 aaKnown RBP15.32■□□□□ 0.04
SMARCA4-207ENST00000541122 FBXO21O94952 628 aa15.31■□□□□ 0.04
SMARCA4-207ENST00000541122 SOAT1P35610 550 aa15.31■□□□□ 0.04
SMARCA4-207ENST00000541122 TAF6P49848 677 aa15.31■□□□□ 0.04
SMARCA4-207ENST00000541122 BFSP2Q13515 415 aa15.31■□□□□ 0.04
SMARCA4-207ENST00000541122 DPYSL3Q14195 570 aa15.31■□□□□ 0.04
SMARCA4-207ENST00000541122 ZDHHC17Q8IUH5 632 aa15.31■□□□□ 0.04
SMARCA4-207ENST00000541122 PLEKHG4BQ96PX9 1271 aa15.31■□□□□ 0.04
SMARCA4-207ENST00000541122 EURLQ9NYK6 297 aa15.31■□□□□ 0.04
SMARCA4-207ENST00000541122 UBQLN1Q9UMX0 589 aaKnown RBP15.31■□□□□ 0.04
SMARCA4-207ENST00000541122 C19orf81C9J6K1 198 aa15.31■□□□□ 0.04
SMARCA4-207ENST00000541122 RBAK-RBAKDNI3L0D1 243 aa15.31■□□□□ 0.04
SMARCA4-207ENST00000541122 C21orf2O43822 256 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms