RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 R4GN57 208 aa9.6□□□□□ -0.87
SNHG1-215ENST00000540904 WDFY4Q6ZS81 3184 aa9.6□□□□□ -0.87
SNHG1-215ENST00000540904 CHURC1-FNTBB4DL54 471 aa9.59□□□□□ -0.87
SNHG1-215ENST00000540904 ACSL4O60488 711 aa9.59□□□□□ -0.87
SNHG1-215ENST00000540904 DAB1O75553 588 aa9.59□□□□□ -0.87
SNHG1-215ENST00000540904 IGLV3-25P01717 112 aa9.59□□□□□ -0.87
SNHG1-215ENST00000540904 APOEP02649 317 aa9.59□□□□□ -0.87
SNHG1-215ENST00000540904 MMP8P22894 467 aa9.59□□□□□ -0.87
SNHG1-215ENST00000540904 HOXC13P31276 330 aa9.59□□□□□ -0.87
SNHG1-215ENST00000540904 GBP1P32455 592 aa9.59□□□□□ -0.87
SNHG1-215ENST00000540904 NOS2P35228 1153 aa9.59□□□□□ -0.87
SNHG1-215ENST00000540904 MATKP42679 507 aa9.59□□□□□ -0.87
SNHG1-215ENST00000540904 TNFRSF4P43489 277 aa9.59□□□□□ -0.87
SNHG1-215ENST00000540904 NSFP46459 744 aaKnown RBP9.59□□□□□ -0.87
SNHG1-215ENST00000540904 DGKGP49619 791 aa9.59□□□□□ -0.87
SNHG1-215ENST00000540904 ASIC2Q16515 512 aa9.59□□□□□ -0.87
SNHG1-215ENST00000540904 CLEC16AQ2KHT3 1053 aa9.59□□□□□ -0.87
SNHG1-215ENST00000540904 MPPE1Q53F39 396 aa9.59□□□□□ -0.87
SNHG1-215ENST00000540904 FAM133BQ5BKY9 247 aaKnown RBP9.59□□□□□ -0.87
SNHG1-215ENST00000540904 C10orf76Q5T2E6 689 aa9.59□□□□□ -0.87
SNHG1-215ENST00000540904 EMC10Q5UCC4 262 aa9.59□□□□□ -0.87
SNHG1-215ENST00000540904 SFMBT2Q5VUG0 894 aa9.59□□□□□ -0.87
SNHG1-215ENST00000540904 FYB2Q5VWT5 728 aa9.59□□□□□ -0.87
SNHG1-215ENST00000540904 RFWD3Q6PCD5 774 aa9.59□□□□□ -0.87
SNHG1-215ENST00000540904 NUDT18Q6ZVK8 323 aa9.59□□□□□ -0.87
SNHG1-215ENST00000540904 IRF2BP2Q7Z5L9 587 aa9.59□□□□□ -0.87
SNHG1-215ENST00000540904 CCDC33Q8N5R6 958 aa9.59□□□□□ -0.87
SNHG1-215ENST00000540904 TERB1Q8NA31 727 aa9.59□□□□□ -0.87
SNHG1-215ENST00000540904 ZNF397Q8NF99 534 aaPredicted RBP9.59□□□□□ -0.87
SNHG1-215ENST00000540904 CCDC26Q8TAB7 109 aa9.59□□□□□ -0.87
SNHG1-215ENST00000540904 USP33Q8TEY7 942 aa9.59□□□□□ -0.87
SNHG1-215ENST00000540904 TMA16Q96EY4 203 aaKnown RBP9.59□□□□□ -0.87
SNHG1-215ENST00000540904 SLC39A13Q96H72 371 aa9.59□□□□□ -0.87
SNHG1-215ENST00000540904 AGPAT1Q99943 283 aa9.59□□□□□ -0.87
SNHG1-215ENST00000540904 C11orf70Q9BRQ4 267 aa9.59□□□□□ -0.87
SNHG1-215ENST00000540904 TTYH3Q9C0H2 523 aa9.59□□□□□ -0.87
SNHG1-215ENST00000540904 ZDHHC4Q9NPG8 344 aa9.59□□□□□ -0.87
SNHG1-215ENST00000540904 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.59□□□□□ -0.87
SNHG1-215ENST00000540904 XPO7Q9UIA9 1087 aaKnown RBP9.59□□□□□ -0.87
SNHG1-215ENST00000540904 STOML2Q9UJZ1 356 aa9.59□□□□□ -0.87
SNHG1-215ENST00000540904 SLC8A2Q9UPR5 921 aa9.59□□□□□ -0.87
SNHG1-215ENST00000540904 A0A0A0MRY4 1105 aa9.58□□□□□ -0.88
SNHG1-215ENST00000540904 K7ESF4 209 aa9.58□□□□□ -0.88
SNHG1-215ENST00000540904 M0QYT0 321 aa9.58□□□□□ -0.88
SNHG1-215ENST00000540904 KLF8O95600 359 aaPredicted RBP9.58□□□□□ -0.88
SNHG1-215ENST00000540904 TPM3P06753 285 aa9.58□□□□□ -0.88
SNHG1-215ENST00000540904 CISD3P0C7P0 127 aa9.58□□□□□ -0.88
SNHG1-215ENST00000540904 SLC2A3P11169 496 aa9.58□□□□□ -0.88
SNHG1-215ENST00000540904 UNGP13051 313 aaPredicted RBP9.58□□□□□ -0.88
SNHG1-215ENST00000540904 TFE3P19532 575 aaPredicted RBP9.58□□□□□ -0.88
SNHG1-215ENST00000540904 ABCB4P21439 1286 aa9.58□□□□□ -0.88
SNHG1-215ENST00000540904 TNFAIP3P21580 790 aa9.58□□□□□ -0.88
SNHG1-215ENST00000540904 HOXD9P28356 352 aaPredicted RBP9.58□□□□□ -0.88
SNHG1-215ENST00000540904 SLC6A4P31645 630 aa9.58□□□□□ -0.88
SNHG1-215ENST00000540904 CCR1P32246 355 aa9.58□□□□□ -0.88
SNHG1-215ENST00000540904 SCNN1AP37088 669 aa9.58□□□□□ -0.88
SNHG1-215ENST00000540904 PBX1P40424 430 aa9.58□□□□□ -0.88
SNHG1-215ENST00000540904 KIR2DL1P43626 348 aaPredicted RBP9.58□□□□□ -0.88
SNHG1-215ENST00000540904 SULT1E1P49888 294 aa9.58□□□□□ -0.88
SNHG1-215ENST00000540904 SGSHP51688 502 aa9.58□□□□□ -0.88
SNHG1-215ENST00000540904 NRLP54845 237 aa9.58□□□□□ -0.88
SNHG1-215ENST00000540904 ZNF445P59923 1031 aa9.58□□□□□ -0.88
SNHG1-215ENST00000540904 MRPS21P82921 87 aaKnown RBP9.58□□□□□ -0.88
SNHG1-215ENST00000540904 DMWDQ09019 674 aa9.58□□□□□ -0.88
SNHG1-215ENST00000540904 DMC1Q14565 340 aa9.58□□□□□ -0.88
SNHG1-215ENST00000540904 ZNF528Q3MIS6 628 aa9.58□□□□□ -0.88
SNHG1-215ENST00000540904 FIGNQ5HY92 759 aa9.58□□□□□ -0.88
SNHG1-215ENST00000540904 PIK3R6Q5UE93 754 aa9.58□□□□□ -0.88
SNHG1-215ENST00000540904 E4F1Q66K89 784 aaPredicted RBP9.58□□□□□ -0.88
SNHG1-215ENST00000540904 HEATR6Q6AI08 1181 aaKnown RBP9.58□□□□□ -0.88
SNHG1-215ENST00000540904 NADSYN1Q6IA69 706 aa9.58□□□□□ -0.88
SNHG1-215ENST00000540904 ZC3H14Q6PJT7 736 aaKnown RBP9.58□□□□□ -0.88
SNHG1-215ENST00000540904 ALLCQ8N6M5 410 aa9.58□□□□□ -0.88
SNHG1-215ENST00000540904 IL17RCQ8NAC3 791 aa9.58□□□□□ -0.88
SNHG1-215ENST00000540904 CPLX3Q8WVH0 158 aa9.58□□□□□ -0.88
SNHG1-215ENST00000540904 ATRIPQ8WXE1 791 aa9.58□□□□□ -0.88
SNHG1-215ENST00000540904 AZIN2Q96A70 460 aa9.58□□□□□ -0.88
SNHG1-215ENST00000540904 ACDQ96AP0 544 aa9.58□□□□□ -0.88
SNHG1-215ENST00000540904 BTN2A3PQ96KV6 586 aa9.58□□□□□ -0.88
SNHG1-215ENST00000540904 HHIPQ96QV1 700 aa9.58□□□□□ -0.88
SNHG1-215ENST00000540904 NPY6RQ99463 290 aa9.58□□□□□ -0.88
SNHG1-215ENST00000540904 DDX50Q9BQ39 737 aaKnown RBP9.58□□□□□ -0.88
SNHG1-215ENST00000540904 NUP58Q9BVL2 599 aa9.58□□□□□ -0.88
SNHG1-215ENST00000540904 EDEM3Q9BZQ6 932 aa9.58□□□□□ -0.88
SNHG1-215ENST00000540904 XPO4Q9C0E2 1151 aaKnown RBP9.58□□□□□ -0.88
SNHG1-215ENST00000540904 NUCKS1Q9H1E3 243 aaKnown RBP9.58□□□□□ -0.88
SNHG1-215ENST00000540904 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.58□□□□□ -0.88
SNHG1-215ENST00000540904 ZSCAN32Q9NX65 697 aa9.58□□□□□ -0.88
SNHG1-215ENST00000540904 AIPL1Q9NZN9 384 aa9.58□□□□□ -0.88
SNHG1-215ENST00000540904 ADAM22Q9P0K1 906 aa9.58□□□□□ -0.88
SNHG1-215ENST00000540904 STIM2Q9P246 746 aa9.58□□□□□ -0.88
SNHG1-215ENST00000540904 SLC12A6Q9UHW9 1150 aa9.58□□□□□ -0.88
SNHG1-215ENST00000540904 CLEC4EQ9ULY5 219 aa9.58□□□□□ -0.88
SNHG1-215ENST00000540904 STAP1Q9ULZ2 295 aa9.58□□□□□ -0.88
SNHG1-215ENST00000540904 MIA3Q5JRA6 1907 aa9.58□□□□□ -0.88
SNHG1-215ENST00000540904 MUC6Q6W4X9 2439 aa9.57□□□□□ -0.88
SNHG1-215ENST00000540904 TYW5A2RUC4 315 aaKnown RBP9.57□□□□□ -0.88
SNHG1-215ENST00000540904 TMCO5BA8MYB1 307 aa9.57□□□□□ -0.88
SNHG1-215ENST00000540904 KCNU1A8MYU2 1149 aa9.57□□□□□ -0.88
SNHG1-215ENST00000540904 PRRT4C9JH25 899 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms