RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 DEPDC1BQ8WUY9 529 aa11.04□□□□□ -0.64
ATL3-204ENST00000540699 RSAD2Q8WXG1 361 aa11.04□□□□□ -0.64
ATL3-204ENST00000540699 NDRG1Q92597 394 aaKnown RBP11.04□□□□□ -0.64
ATL3-204ENST00000540699 ALG3Q92685 438 aa11.04□□□□□ -0.64
ATL3-204ENST00000540699 KRT35Q92764 455 aa11.04□□□□□ -0.64
ATL3-204ENST00000540699 PIWIL1Q96J94 861 aaKnown RBP11.04□□□□□ -0.64
ATL3-204ENST00000540699 ZFRQ96KR1 1074 aaKnown RBP11.04□□□□□ -0.64
ATL3-204ENST00000540699 LRRC3BQ96PB8 259 aa11.04□□□□□ -0.64
ATL3-204ENST00000540699 CYP2S1Q96SQ9 504 aa11.04□□□□□ -0.64
ATL3-204ENST00000540699 KXD1Q9BQD3 176 aa11.04□□□□□ -0.64
ATL3-204ENST00000540699 RPP25Q9BUL9 199 aaKnown RBP11.04□□□□□ -0.64
ATL3-204ENST00000540699 SELENOOQ9BVL4 669 aa11.04□□□□□ -0.64
ATL3-204ENST00000540699 PLA2G2FQ9BZM2 168 aa11.04□□□□□ -0.64
ATL3-204ENST00000540699 CARD9Q9H257 536 aa11.04□□□□□ -0.64
ATL3-204ENST00000540699 CCSER2Q9H7U1 834 aa11.04□□□□□ -0.64
ATL3-204ENST00000540699 TRPC7Q9HCX4 862 aa11.04□□□□□ -0.64
ATL3-204ENST00000540699 METTL5Q9NRN9 209 aaKnown RBP11.04□□□□□ -0.64
ATL3-204ENST00000540699 RNF14Q9UBS8 474 aa11.04□□□□□ -0.64
ATL3-204ENST00000540699 IP6K2Q9UHH9 426 aa11.04□□□□□ -0.64
ATL3-204ENST00000540699 TMEM59LQ9UK28 342 aa11.04□□□□□ -0.64
ATL3-204ENST00000540699 SORCS3Q9UPU3 1222 aa11.04□□□□□ -0.64
ATL3-204ENST00000540699 CCL26Q9Y258 94 aa11.04□□□□□ -0.64
ATL3-204ENST00000540699 SPTBN4Q9H254 2564 aa11.04□□□□□ -0.64
ATL3-204ENST00000540699 MYOFQ9NZM1 2061 aa11.04□□□□□ -0.64
ATL3-204ENST00000540699 UQCRHLA0A096LP55 91 aa11.03□□□□□ -0.64
ATL3-204ENST00000540699 CCDC66A2RUB6 948 aa11.03□□□□□ -0.64
ATL3-204ENST00000540699 HEPACAM2A8MVW5 462 aa11.03□□□□□ -0.64
ATL3-204ENST00000540699 GOLGA8SH3BPF8 625 aa11.03□□□□□ -0.64
ATL3-204ENST00000540699 SPOPO43791 374 aa11.03□□□□□ -0.64
ATL3-204ENST00000540699 UQCRHP07919 91 aa11.03□□□□□ -0.64
ATL3-204ENST00000540699 GLI1P08151 1106 aa11.03□□□□□ -0.64
ATL3-204ENST00000540699 RALAP11233 206 aa11.03□□□□□ -0.64
ATL3-204ENST00000540699 KRT3P12035 628 aa11.03□□□□□ -0.64
ATL3-204ENST00000540699 RFC1P35251 1148 aaPredicted RBP11.03□□□□□ -0.64
ATL3-204ENST00000540699 NUBP1P53384 320 aa11.03□□□□□ -0.64
ATL3-204ENST00000540699 SNX16P57768 344 aa11.03□□□□□ -0.64
ATL3-204ENST00000540699 ZXDBP98169 803 aa11.03□□□□□ -0.64
ATL3-204ENST00000540699 SLC6A3Q01959 620 aa11.03□□□□□ -0.64
ATL3-204ENST00000540699 ZNF77Q15935 545 aa11.03□□□□□ -0.64
ATL3-204ENST00000540699 FAM102AQ5T9C2 384 aaPredicted RBP11.03□□□□□ -0.64
ATL3-204ENST00000540699 BSPRYQ5W0U4 402 aa11.03□□□□□ -0.64
ATL3-204ENST00000540699 OR6B2Q6IFH4 312 aa11.03□□□□□ -0.64
ATL3-204ENST00000540699 TRNP1Q6NT89 227 aa11.03□□□□□ -0.64
ATL3-204ENST00000540699 MSANTD2Q6P1R3 559 aa11.03□□□□□ -0.64
ATL3-204ENST00000540699 DCUN1D2Q6PH85 259 aa11.03□□□□□ -0.64
ATL3-204ENST00000540699 TADA2BQ86TJ2 420 aa11.03□□□□□ -0.64
ATL3-204ENST00000540699 SCUBE3Q8IX30 993 aa11.03□□□□□ -0.64
ATL3-204ENST00000540699 MNS1Q8NEH6 495 aa11.03□□□□□ -0.64
ATL3-204ENST00000540699 RIN3Q8TB24 985 aa11.03□□□□□ -0.64
ATL3-204ENST00000540699 ACTRT1Q8TDG2 376 aa11.03□□□□□ -0.64
ATL3-204ENST00000540699 CLEC4CQ8WTT0 213 aa11.03□□□□□ -0.64
ATL3-204ENST00000540699 MS4A14Q96JA4 679 aa11.03□□□□□ -0.64
ATL3-204ENST00000540699 CAPZA3Q96KX2 299 aa11.03□□□□□ -0.64
ATL3-204ENST00000540699 CDK5RAP1Q96SZ6 601 aaKnown RBP11.03□□□□□ -0.64
ATL3-204ENST00000540699 SMG9Q9H0W8 520 aaKnown RBP11.03□□□□□ -0.64
ATL3-204ENST00000540699 SMOC2Q9H3U7 446 aa11.03□□□□□ -0.64
ATL3-204ENST00000540699 SYNCQ9H7C4 482 aa11.03□□□□□ -0.64
ATL3-204ENST00000540699 SLC2A4RGQ9NR83 387 aa11.03□□□□□ -0.64
ATL3-204ENST00000540699 ST7Q9NRC1 585 aa11.03□□□□□ -0.64
ATL3-204ENST00000540699 ABCC13Q9NSE7 274 aa11.03□□□□□ -0.64
ATL3-204ENST00000540699 ASNSD1Q9NWL6 643 aa11.03□□□□□ -0.64
ATL3-204ENST00000540699 TTC7AQ9ULT0 858 aaPredicted RBP11.03□□□□□ -0.64
ATL3-204ENST00000540699 DUSP12Q9UNI6 340 aa11.03□□□□□ -0.64
ATL3-204ENST00000540699 PCDHA3Q9Y5H8 950 aa11.03□□□□□ -0.64
ATL3-204ENST00000540699 COL4A3Q01955 1670 aa11.03□□□□□ -0.64
ATL3-204ENST00000540699 RIF1Q5UIP0 2472 aaKnown RBP11.02□□□□□ -0.64
ATL3-204ENST00000540699 CTAGE15A4D2H0 777 aa11.02□□□□□ -0.65
ATL3-204ENST00000540699 C2CD4BA6NLJ0 364 aa11.02□□□□□ -0.65
ATL3-204ENST00000540699 EFCAB8A8MWE9 144 aa11.02□□□□□ -0.65
ATL3-204ENST00000540699 ARNTLO00327 626 aa11.02□□□□□ -0.65
ATL3-204ENST00000540699 PIK3R2O00459 728 aa11.02□□□□□ -0.65
ATL3-204ENST00000540699 DPYSL4O14531 572 aa11.02□□□□□ -0.65
ATL3-204ENST00000540699 PSTPIP1O43586 416 aa11.02□□□□□ -0.65
ATL3-204ENST00000540699 TBX18O95935 607 aa11.02□□□□□ -0.65
ATL3-204ENST00000540699 LTFP02788 710 aa11.02□□□□□ -0.65
ATL3-204ENST00000540699 FYNP06241 537 aa11.02□□□□□ -0.65
ATL3-204ENST00000540699 CTAGE8P0CG41 777 aa11.02□□□□□ -0.65
ATL3-204ENST00000540699 SRFP11831 508 aa11.02□□□□□ -0.65
ATL3-204ENST00000540699 PSMC3P17980 439 aa11.02□□□□□ -0.65
ATL3-204ENST00000540699 ATP5C1P36542 298 aaKnown RBP11.02□□□□□ -0.65
ATL3-204ENST00000540699 DNA2P51530 1060 aa11.02□□□□□ -0.65
ATL3-204ENST00000540699 TAS2R40P59535 323 aa11.02□□□□□ -0.65
ATL3-204ENST00000540699 PIGHQ14442 188 aaPredicted RBP11.02□□□□□ -0.65
ATL3-204ENST00000540699 SLC26A9Q7LBE3 791 aa11.02□□□□□ -0.65
ATL3-204ENST00000540699 ARCQ7LC44 396 aa11.02□□□□□ -0.65
ATL3-204ENST00000540699 CTAGE6Q86UF2 777 aa11.02□□□□□ -0.65
ATL3-204ENST00000540699 DDX42Q86XP3 938 aaKnown RBP eCLIP11.02□□□□□ -0.65
ATL3-204ENST00000540699 CTAGE4Q8IX94 777 aa11.02□□□□□ -0.65
ATL3-204ENST00000540699 ARFGAP1Q8N6T3 406 aa11.02□□□□□ -0.65
ATL3-204ENST00000540699 EMC1Q8N766 993 aa11.02□□□□□ -0.65
ATL3-204ENST00000540699 BPIFB1Q8TDL5 484 aa11.02□□□□□ -0.65
ATL3-204ENST00000540699 ATOH1Q92858 354 aaPredicted RBP11.02□□□□□ -0.65
ATL3-204ENST00000540699 TRIM62Q9BVG3 475 aa11.02□□□□□ -0.65
ATL3-204ENST00000540699 KLF16Q9BXK1 252 aaPredicted RBP11.02□□□□□ -0.65
ATL3-204ENST00000540699 TRPV5Q9NQA5 729 aa11.02□□□□□ -0.65
ATL3-204ENST00000540699 OLA1Q9NTK5 396 aaKnown RBP11.02□□□□□ -0.65
ATL3-204ENST00000540699 FAM86C1Q9NVL1 165 aa11.02□□□□□ -0.65
ATL3-204ENST00000540699 SMARCAL1Q9NZC9 954 aa11.02□□□□□ -0.65
ATL3-204ENST00000540699 CPQQ9Y646 472 aa11.02□□□□□ -0.65
ATL3-204ENST00000540699 FRYLO94915 3013 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms