RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 GRIA1P42261 906 aa12.68□□□□□ -0.38
NPC1-202ENST00000540608 SLC1A6P48664 564 aa12.68□□□□□ -0.38
NPC1-202ENST00000540608 IRX4P78413 519 aa12.68□□□□□ -0.38
NPC1-202ENST00000540608 SLC10A2Q12908 348 aaPredicted RBP12.68□□□□□ -0.38
NPC1-202ENST00000540608 SEMA5AQ13591 1074 aa12.68□□□□□ -0.38
NPC1-202ENST00000540608 SLC10A6Q3KNW5 377 aa12.68□□□□□ -0.38
NPC1-202ENST00000540608 RABGAP1LQ5R372 815 aa12.68□□□□□ -0.38
NPC1-202ENST00000540608 CELF3Q5SZQ8 465 aaKnown RBP12.68□□□□□ -0.38
NPC1-202ENST00000540608 STEAP4Q687X5 459 aa12.68□□□□□ -0.38
NPC1-202ENST00000540608 PMF1Q6P1K2 205 aa12.68□□□□□ -0.38
NPC1-202ENST00000540608 PAXIP1Q6ZW49 1069 aaPredicted RBP12.68□□□□□ -0.38
NPC1-202ENST00000540608 C12orf29Q8N999 325 aa12.68□□□□□ -0.38
NPC1-202ENST00000540608 ZNF778Q96MU6 729 aa12.68□□□□□ -0.38
NPC1-202ENST00000540608 S100A14Q9HCY8 104 aa12.68□□□□□ -0.38
NPC1-202ENST00000540608 APOBEC2Q9Y235 224 aaKnown RBP12.68□□□□□ -0.38
NPC1-202ENST00000540608 BUD23O43709 281 aaKnown RBP12.68□□□□□ -0.38
NPC1-202ENST00000540608 UBTFL6P0CB48 400 aaPredicted RBP12.68□□□□□ -0.38
NPC1-202ENST00000540608 L1CAMP32004 1257 aa12.68□□□□□ -0.38
NPC1-202ENST00000540608 CLCN3P51790 818 aa12.68□□□□□ -0.38
NPC1-202ENST00000540608 HDAC4P56524 1084 aa12.68□□□□□ -0.38
NPC1-202ENST00000540608 SARNPP82979 210 aaKnown RBP12.68□□□□□ -0.38
NPC1-202ENST00000540608 RBP5P82980 135 aa12.68□□□□□ -0.38
NPC1-202ENST00000540608 GBE1Q04446 702 aa12.68□□□□□ -0.38
NPC1-202ENST00000540608 GOLGA7BQ2TAP0 167 aa12.68□□□□□ -0.38
NPC1-202ENST00000540608 C16orf46Q6P387 395 aa12.68□□□□□ -0.38
NPC1-202ENST00000540608 GADL1Q6ZQY3 521 aa12.68□□□□□ -0.38
NPC1-202ENST00000540608 MARK2Q7KZI7 788 aaKnown RBP12.68□□□□□ -0.38
NPC1-202ENST00000540608 TMEM110Q86TL2 294 aa12.68□□□□□ -0.38
NPC1-202ENST00000540608 AFG1LQ8WV93 481 aa12.68□□□□□ -0.38
NPC1-202ENST00000540608 PPP2R3CQ969Q6 453 aa12.68□□□□□ -0.38
NPC1-202ENST00000540608 FGD4Q96M96 766 aa12.68□□□□□ -0.38
NPC1-202ENST00000540608 SLC4A5Q9BY07 1137 aa12.68□□□□□ -0.38
NPC1-202ENST00000540608 IFT122Q9HBG6 1241 aa12.68□□□□□ -0.38
NPC1-202ENST00000540608 DCDC2Q9UHG0 476 aa12.68□□□□□ -0.38
NPC1-202ENST00000540608 GLRA3O75311 464 aa12.67□□□□□ -0.38
NPC1-202ENST00000540608 LYPLA1O75608 230 aaPredicted RBP12.67□□□□□ -0.38
NPC1-202ENST00000540608 STAU1O95793 577 aaKnown RBP12.67□□□□□ -0.38
NPC1-202ENST00000540608 ERFP50548 548 aa12.67□□□□□ -0.38
NPC1-202ENST00000540608 SLC25A3Q00325 362 aa12.67□□□□□ -0.38
NPC1-202ENST00000540608 PDE1BQ01064 536 aa12.67□□□□□ -0.38
NPC1-202ENST00000540608 CDC16Q13042 620 aa12.67□□□□□ -0.38
NPC1-202ENST00000540608 HNRNPDQ14103 355 aaKnown RBP12.67□□□□□ -0.38
NPC1-202ENST00000540608 TMEM132DQ14C87 1099 aa12.67□□□□□ -0.38
NPC1-202ENST00000540608 DPYSL2Q16555 572 aa12.67□□□□□ -0.38
NPC1-202ENST00000540608 FAM187BQ17R55 369 aa12.67□□□□□ -0.38
NPC1-202ENST00000540608 PKDCCQ504Y2 493 aa12.67□□□□□ -0.38
NPC1-202ENST00000540608 EFHC1Q5JVL4 640 aa12.67□□□□□ -0.38
NPC1-202ENST00000540608 N4BP2L1Q5TBK1 243 aaPredicted RBP12.67□□□□□ -0.38
NPC1-202ENST00000540608 KCNT2Q6UVM3 1135 aa12.67□□□□□ -0.38
NPC1-202ENST00000540608 SCUBE3Q8IX30 993 aa12.67□□□□□ -0.38
NPC1-202ENST00000540608 GSTCDQ8NEC7 633 aa12.67□□□□□ -0.38
NPC1-202ENST00000540608 COPS5Q92905 334 aa12.67□□□□□ -0.38
NPC1-202ENST00000540608 GBP5Q96PP8 586 aa12.67□□□□□ -0.38
NPC1-202ENST00000540608 QKIQ96PU8 341 aaKnown RBP eCLIP12.67□□□□□ -0.386e-7■■■■□ 21.5
NPC1-202ENST00000540608 MMP19Q99542 508 aa12.67□□□□□ -0.38
NPC1-202ENST00000540608 CCDC28BQ9BUN5 200 aa12.67□□□□□ -0.38
NPC1-202ENST00000540608 ITGA11Q9UKX5 1188 aa12.67□□□□□ -0.38
NPC1-202ENST00000540608 PPP2R3BQ9Y5P8 575 aa12.67□□□□□ -0.38
NPC1-202ENST00000540608 PCNTO95613 3336 aa12.67□□□□□ -0.38
NPC1-202ENST00000540608 MEI4A8MW99 385 aa12.67□□□□□ -0.38
NPC1-202ENST00000540608 CCNT2O60583 730 aaKnown RBP12.67□□□□□ -0.38
NPC1-202ENST00000540608 PLIN3O60664 434 aa12.67□□□□□ -0.38
NPC1-202ENST00000540608 CSDE1O75534 798 aaKnown RBP12.67□□□□□ -0.38
NPC1-202ENST00000540608 SNUPNO95149 360 aaKnown RBP12.67□□□□□ -0.38
NPC1-202ENST00000540608 ALDOAP04075 364 aaKnown RBP12.67□□□□□ -0.38
NPC1-202ENST00000540608 MYCNP04198 464 aaPredicted RBP12.67□□□□□ -0.38
NPC1-202ENST00000540608 MLNP12872 115 aa12.67□□□□□ -0.38
NPC1-202ENST00000540608 RPL10AP62906 217 aaKnown RBP12.67□□□□□ -0.38
NPC1-202ENST00000540608 NIPAL4Q0D2K0 466 aa12.67□□□□□ -0.38
NPC1-202ENST00000540608 PDE1CQ14123 709 aaPredicted RBP12.67□□□□□ -0.38
NPC1-202ENST00000540608 RBBP5Q15291 538 aaKnown RBP12.67□□□□□ -0.38
NPC1-202ENST00000540608 CCNJLQ8IV13 435 aa12.67□□□□□ -0.38
NPC1-202ENST00000540608 SLC25A41Q8N5S1 370 aa12.67□□□□□ -0.38
NPC1-202ENST00000540608 ATP2A3Q93084 1043 aa12.67□□□□□ -0.38
NPC1-202ENST00000540608 FAM96AQ9H5X1 160 aa12.67□□□□□ -0.38
NPC1-202ENST00000540608 ZDHHC7Q9NXF8 308 aa12.67□□□□□ -0.38
NPC1-202ENST00000540608 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.66□□□□□ -0.38
NPC1-202ENST00000540608 WDR27A2RRH5 827 aa12.66□□□□□ -0.38
NPC1-202ENST00000540608 ARHGAP42A6NI28 874 aa12.66□□□□□ -0.38
NPC1-202ENST00000540608 HBP1O60381 514 aa12.66□□□□□ -0.38
NPC1-202ENST00000540608 CNMDO75829 334 aa12.66□□□□□ -0.38
NPC1-202ENST00000540608 SERPINE1P05121 402 aa12.66□□□□□ -0.38
NPC1-202ENST00000540608 SLC26A2P50443 739 aa12.66□□□□□ -0.38
NPC1-202ENST00000540608 POU5F1BQ06416 359 aa12.66□□□□□ -0.38
NPC1-202ENST00000540608 PPP1R26Q5T8A7 1209 aaPredicted RBP12.66□□□□□ -0.38
NPC1-202ENST00000540608 DPY19L2Q6NUT2 758 aa12.66□□□□□ -0.38
NPC1-202ENST00000540608 PACS1Q6VY07 963 aa12.66□□□□□ -0.38
NPC1-202ENST00000540608 SESTD1Q86VW0 696 aa12.66□□□□□ -0.38
NPC1-202ENST00000540608 UNC5BQ8IZJ1 945 aa12.66□□□□□ -0.38
NPC1-202ENST00000540608 SLC35F5Q8WV83 523 aa12.66□□□□□ -0.38
NPC1-202ENST00000540608 CDKL2Q92772 493 aa12.66□□□□□ -0.38
NPC1-202ENST00000540608 SPATA33Q96N06 139 aa12.66□□□□□ -0.38
NPC1-202ENST00000540608 DDX50Q9BQ39 737 aaKnown RBP12.66□□□□□ -0.38
NPC1-202ENST00000540608 PDZD7Q9H5P4 517 aa12.66□□□□□ -0.38
NPC1-202ENST00000540608 XPNPEP3Q9NQH7 507 aa12.66□□□□□ -0.38
NPC1-202ENST00000540608 DNAJC28Q9NX36 388 aa12.66□□□□□ -0.38
NPC1-202ENST00000540608 DPP3Q9NY33 737 aa12.66□□□□□ -0.38
NPC1-202ENST00000540608 MORF4L1Q9UBU8 362 aa12.66□□□□□ -0.38
NPC1-202ENST00000540608 A6NJR5 290 aa12.66□□□□□ -0.38
NPC1-202ENST00000540608 TPP1O14773 563 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms