RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 KCNK18Q7Z418 384 aa9.76□□□□□ -0.85
CTNNA1-243ENST00000540387 CHSY1Q86X52 802 aa9.76□□□□□ -0.85
CTNNA1-243ENST00000540387 ZCCHC9Q8N567 271 aaKnown RBP9.76□□□□□ -0.85
CTNNA1-243ENST00000540387 BANPQ8N9N5 519 aa9.76□□□□□ -0.85
CTNNA1-243ENST00000540387 ZNF784Q8NCA9 323 aaPredicted RBP9.76□□□□□ -0.85
CTNNA1-243ENST00000540387 CATSPER1Q8NEC5 780 aa9.76□□□□□ -0.85
CTNNA1-243ENST00000540387 GRK7Q8WTQ7 553 aa9.76□□□□□ -0.85
CTNNA1-243ENST00000540387 TRUB1Q8WWH5 349 aaKnown RBP9.76□□□□□ -0.85
CTNNA1-243ENST00000540387 CLEC4DQ8WXI8 215 aa9.76□□□□□ -0.85
CTNNA1-243ENST00000540387 TTC17Q96AE7 1141 aa9.76□□□□□ -0.85
CTNNA1-243ENST00000540387 DNAJC19Q96DA6 116 aa9.76□□□□□ -0.85
CTNNA1-243ENST00000540387 LRGUKQ96M69 825 aa9.76□□□□□ -0.85
CTNNA1-243ENST00000540387 NLRP4Q96MN2 994 aa9.76□□□□□ -0.85
CTNNA1-243ENST00000540387 HERC2P3Q9BVR0 1158 aa9.76□□□□□ -0.85
CTNNA1-243ENST00000540387 WWP1Q9H0M0 922 aa9.76□□□□□ -0.85
CTNNA1-243ENST00000540387 CAAP1Q9H8G2 361 aa9.76□□□□□ -0.85
CTNNA1-243ENST00000540387 PARVGQ9HBI0 331 aa9.76□□□□□ -0.85
CTNNA1-243ENST00000540387 DDX56Q9NY93 547 aaKnown RBP9.76□□□□□ -0.85
CTNNA1-243ENST00000540387 SLC24A2Q9UI40 661 aa9.76□□□□□ -0.85
CTNNA1-243ENST00000540387 DAPK2Q9UIK4 370 aa9.76□□□□□ -0.85
CTNNA1-243ENST00000540387 B3GNT3Q9Y2A9 372 aa9.76□□□□□ -0.85
CTNNA1-243ENST00000540387 A0A1W2PPW3 197 aa9.76□□□□□ -0.85
CTNNA1-243ENST00000540387 CLOCKO15516 846 aa9.76□□□□□ -0.85
CTNNA1-243ENST00000540387 CLASP2O75122 1294 aaKnown RBP9.76□□□□□ -0.85
CTNNA1-243ENST00000540387 MTRF1O75570 445 aaKnown RBP9.76□□□□□ -0.85
CTNNA1-243ENST00000540387 CRYZL1O95825 349 aa9.76□□□□□ -0.85
CTNNA1-243ENST00000540387 C8BP07358 591 aa9.76□□□□□ -0.85
CTNNA1-243ENST00000540387 DHRS4L1P0CG22 281 aa9.76□□□□□ -0.85
CTNNA1-243ENST00000540387 CYP2C8P10632 490 aa9.76□□□□□ -0.85
CTNNA1-243ENST00000540387 GABRB3P28472 473 aa9.76□□□□□ -0.85
CTNNA1-243ENST00000540387 STAT3P40763 770 aa9.76□□□□□ -0.85
CTNNA1-243ENST00000540387 HSPA13P48723 471 aa9.76□□□□□ -0.85
CTNNA1-243ENST00000540387 KRT76Q01546 638 aa9.76□□□□□ -0.85
CTNNA1-243ENST00000540387 ADGRE1Q14246 886 aa9.76□□□□□ -0.85
CTNNA1-243ENST00000540387 RGMBQ6NW40 437 aa9.76□□□□□ -0.85
CTNNA1-243ENST00000540387 ZBTB46Q86UZ6 589 aa9.76□□□□□ -0.85
CTNNA1-243ENST00000540387 CHERPQ8IWX8 916 aaKnown RBP9.76□□□□□ -0.85
CTNNA1-243ENST00000540387 BBOF1Q8ND07 529 aa9.76□□□□□ -0.85
CTNNA1-243ENST00000540387 HCAR2Q8TDS4 363 aa9.76□□□□□ -0.85
CTNNA1-243ENST00000540387 CAPSLQ8WWF8 208 aa9.76□□□□□ -0.85
CTNNA1-243ENST00000540387 NLRP7Q8WX94 980 aa9.76□□□□□ -0.85
CTNNA1-243ENST00000540387 TANKQ92844 425 aa9.76□□□□□ -0.85
CTNNA1-243ENST00000540387 PTPN18Q99952 460 aa9.76□□□□□ -0.85
CTNNA1-243ENST00000540387 TDRD1Q9BXT4 1180 aaKnown RBP9.76□□□□□ -0.85
CTNNA1-243ENST00000540387 INO80BQ9C086 356 aaPredicted RBP9.76□□□□□ -0.85
CTNNA1-243ENST00000540387 GLT8D2Q9H1C3 349 aa9.76□□□□□ -0.85
CTNNA1-243ENST00000540387 RPF2Q9H7B2 306 aaKnown RBP9.76□□□□□ -0.85
CTNNA1-243ENST00000540387 MARCH7Q9H992 704 aa9.76□□□□□ -0.85
CTNNA1-243ENST00000540387 CYP4F11Q9HBI6 524 aa9.76□□□□□ -0.85
CTNNA1-243ENST00000540387 GPSM3Q9Y4H4 160 aa9.76□□□□□ -0.85
CTNNA1-243ENST00000540387 H3BNH8 94 aa9.75□□□□□ -0.85
CTNNA1-243ENST00000540387 CDK2AP1O14519 115 aa9.75□□□□□ -0.85
CTNNA1-243ENST00000540387 MYO1DO94832 1006 aa9.75□□□□□ -0.85
CTNNA1-243ENST00000540387 PROCP04070 461 aa9.75□□□□□ -0.85
CTNNA1-243ENST00000540387 XRCC5P13010 732 aaKnown RBP9.75□□□□□ -0.85
CTNNA1-243ENST00000540387 AOC1P19801 751 aa9.75□□□□□ -0.85
CTNNA1-243ENST00000540387 MAN1A1P33908 653 aa9.75□□□□□ -0.85
CTNNA1-243ENST00000540387 CDH15P55291 814 aa9.75□□□□□ -0.85
CTNNA1-243ENST00000540387 ZBED5Q49AG3 693 aa9.75□□□□□ -0.85
CTNNA1-243ENST00000540387 CCDC58Q4VC31 144 aa9.75□□□□□ -0.85
CTNNA1-243ENST00000540387 FGD3Q5JSP0 725 aa9.75□□□□□ -0.85
CTNNA1-243ENST00000540387 BTBD8Q5XKL5 378 aa9.75□□□□□ -0.85
CTNNA1-243ENST00000540387 LYSMD3Q7Z3D4 306 aa9.75□□□□□ -0.85
CTNNA1-243ENST00000540387 FRMD5Q7Z6J6 570 aa9.75□□□□□ -0.85
CTNNA1-243ENST00000540387 SETD3Q86TU7 594 aaPredicted RBP9.75□□□□□ -0.85
CTNNA1-243ENST00000540387 OSTM1Q86WC4 334 aa9.75□□□□□ -0.85
CTNNA1-243ENST00000540387 RASAL3Q86YV0 1011 aa9.75□□□□□ -0.85
CTNNA1-243ENST00000540387 CCDC89Q8N998 374 aa9.75□□□□□ -0.85
CTNNA1-243ENST00000540387 ADCY4Q8NFM4 1077 aa9.75□□□□□ -0.85
CTNNA1-243ENST00000540387 ZNF641Q96N77 438 aaPredicted RBP9.75□□□□□ -0.85
CTNNA1-243ENST00000540387 TEX13BQ9BXU2 312 aa9.75□□□□□ -0.85
CTNNA1-243ENST00000540387 GCOM2Q9BZD3 368 aaPredicted RBP9.75□□□□□ -0.85
CTNNA1-243ENST00000540387 EPS15L1Q9UBC2 864 aa9.75□□□□□ -0.85
CTNNA1-243ENST00000540387 ABT1Q9ULW3 272 aaKnown RBP9.75□□□□□ -0.85
CTNNA1-243ENST00000540387 PDHXO00330 501 aa9.75□□□□□ -0.85
CTNNA1-243ENST00000540387 GIPC1O14908 333 aa9.75□□□□□ -0.85
CTNNA1-243ENST00000540387 ICMTO60725 284 aa9.75□□□□□ -0.85
CTNNA1-243ENST00000540387 STAM2O75886 525 aa9.75□□□□□ -0.85
CTNNA1-243ENST00000540387 BMP10O95393 424 aa9.75□□□□□ -0.85
CTNNA1-243ENST00000540387 SERPINA6P08185 405 aa9.75□□□□□ -0.85
CTNNA1-243ENST00000540387 ENPP1P22413 925 aa9.75□□□□□ -0.85
CTNNA1-243ENST00000540387 CLK3P49761 638 aaKnown RBP9.75□□□□□ -0.85
CTNNA1-243ENST00000540387 OAZ1P54368 228 aa9.75□□□□□ -0.85
CTNNA1-243ENST00000540387 ESRRGP62508 458 aa9.75□□□□□ -0.85
CTNNA1-243ENST00000540387 CTAG1AP78358 180 aa9.75□□□□□ -0.85
CTNNA1-243ENST00000540387 MRPS9P82933 396 aaKnown RBP9.75□□□□□ -0.85
CTNNA1-243ENST00000540387 GNA12Q03113 381 aa9.75□□□□□ -0.85
CTNNA1-243ENST00000540387 DRAP1Q14919 205 aaPredicted RBP9.75□□□□□ -0.85
CTNNA1-243ENST00000540387 SPCS2Q15005 226 aa9.75□□□□□ -0.85
CTNNA1-243ENST00000540387 Q3C1V9 767 aa9.75□□□□□ -0.85
CTNNA1-243ENST00000540387 ANKRD26P1Q6NSI1 321 aa9.75□□□□□ -0.85
CTNNA1-243ENST00000540387 NEK8Q86SG6 692 aa9.75□□□□□ -0.85
CTNNA1-243ENST00000540387 IGFN1Q86VF2 1251 aa9.75□□□□□ -0.85
CTNNA1-243ENST00000540387 ARID3BQ8IVW6 561 aaPredicted RBP9.75□□□□□ -0.85
CTNNA1-243ENST00000540387 TRIM56Q9BRZ2 755 aaKnown RBP9.75□□□□□ -0.85
CTNNA1-243ENST00000540387 MROQ9BYG7 248 aa9.75□□□□□ -0.85
CTNNA1-243ENST00000540387 ANO3Q9BYT9 981 aa9.75□□□□□ -0.85
CTNNA1-243ENST00000540387 TXNRD2Q9NNW7 524 aa9.75□□□□□ -0.85
CTNNA1-243ENST00000540387 RNF146Q9NTX7 359 aa9.75□□□□□ -0.85
CTNNA1-243ENST00000540387 HACD3Q9P035 362 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms